Experiment: Varel_Bryant medium with Chlorpromazine 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0148 and BT0149 are separated by 217 nucleotides BT0149 and BT0150 are separated by 38 nucleotides
BT0148: BT0148 - putative hemolysin (NCBI ptt file), at 151,535 to 152,824
BT0148
BT0149: BT0149 - peptidase (NCBI ptt file), at 153,042 to 153,824
BT0149
BT0150: BT0150 - putative ferric aerobactin receptor (NCBI ptt file), at 153,863 to 156,241
BT0150
Position (kb)
153
154 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 152.094 kb on + strand, within BT0148 at 152.104 kb on - strand, within BT0148 at 152.485 kb on + strand, within BT0148 at 152.496 kb on + strand, within BT0148 at 152.542 kb on - strand, within BT0148 at 152.608 kb on - strand, within BT0148 at 152.798 kb on + strand at 152.798 kb on + strand at 152.807 kb on + strand at 152.843 kb on - strand at 152.897 kb on - strand at 152.937 kb on - strand at 152.959 kb on - strand at 152.993 kb on - strand at 152.993 kb on - strand at 153.071 kb on + strand at 153.132 kb on - strand, within BT0149 at 153.167 kb on + strand, within BT0149 at 153.185 kb on + strand, within BT0149 at 153.186 kb on - strand, within BT0149 at 153.229 kb on + strand, within BT0149 at 153.371 kb on - strand, within BT0149 at 153.533 kb on - strand, within BT0149 at 153.534 kb on + strand, within BT0149 at 153.554 kb on + strand, within BT0149 at 153.562 kb on - strand, within BT0149 at 153.632 kb on + strand, within BT0149 at 153.653 kb on + strand, within BT0149 at 153.653 kb on + strand, within BT0149 at 153.655 kb on + strand, within BT0149 at 153.655 kb on + strand, within BT0149 at 153.656 kb on - strand, within BT0149 at 153.690 kb on + strand, within BT0149 at 153.802 kb on - strand at 153.805 kb on - strand at 153.851 kb on + strand at 153.864 kb on + strand at 153.990 kb on - strand at 153.990 kb on - strand at 154.051 kb on + strand at 154.052 kb on - strand at 154.134 kb on + strand, within BT0150 at 154.197 kb on + strand, within BT0150 at 154.221 kb on - strand, within BT0150 at 154.222 kb on + strand, within BT0150 at 154.342 kb on - strand, within BT0150 at 154.619 kb on - strand, within BT0150 at 154.696 kb on - strand, within BT0150 at 154.801 kb on - strand, within BT0150
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with Chlorpromazine 0.0125 mM remove 152,094 + BT0148 0.43 -2.1 152,104 - BT0148 0.44 +2.3 152,485 + BT0148 0.74 -1.5 152,496 + BT0148 0.74 -2.7 152,542 - BT0148 0.78 +0.9 152,608 - BT0148 0.83 -0.7 152,798 + -1.7 152,798 + -1.4 152,807 + -0.8 152,843 - -2.2 152,897 - -0.3 152,937 - +0.5 152,959 - +0.9 152,993 - -2.2 152,993 - -1.5 153,071 + -0.2 153,132 - BT0149 0.11 -2.1 153,167 + BT0149 0.16 -0.8 153,185 + BT0149 0.18 +0.9 153,186 - BT0149 0.18 -1.7 153,229 + BT0149 0.24 -0.8 153,371 - BT0149 0.42 +0.9 153,533 - BT0149 0.63 -0.7 153,534 + BT0149 0.63 +0.9 153,554 + BT0149 0.65 -0.8 153,562 - BT0149 0.66 -0.7 153,632 + BT0149 0.75 -0.7 153,653 + BT0149 0.78 +1.9 153,653 + BT0149 0.78 +0.9 153,655 + BT0149 0.78 -0.7 153,655 + BT0149 0.78 +0.6 153,656 - BT0149 0.78 +1.9 153,690 + BT0149 0.83 +1.9 153,802 - -0.3 153,805 - +2.3 153,851 + -0.1 153,864 + -2.4 153,990 - +1.3 153,990 - -0.1 154,051 + +0.3 154,052 - -0.2 154,134 + BT0150 0.11 -1.7 154,197 + BT0150 0.14 -1.1 154,221 - BT0150 0.15 -1.6 154,222 + BT0150 0.15 +0.5 154,342 - BT0150 0.20 -0.1 154,619 - BT0150 0.32 +0.1 154,696 - BT0150 0.35 -1.4 154,801 - BT0150 0.39 -0.7
Or see this region's nucleotide sequence