Experiment: Pyruvate-Sulfite (60-20mM) with Chromate 50uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1389 and DVU1390 are separated by 184 nucleotides DVU1390 and DORF10920 are separated by 221 nucleotides DORF10920 and DVU1392 are separated by 281 nucleotides
DVU1389: DVU1389 - hypothetical protein (TIGR), at 1,461,664 to 1,462,797
DVU1389
DVU1390: DVU1390 - hypothetical protein (TIGR), at 1,462,982 to 1,463,449
DVU1390
DORF10920: DORF10920 - no description, at 1,463,671 to 1,464,156
DORF10920
DVU1392: DVU1392 - NLP/P60 family protein (TIGR), at 1,464,438 to 1,465,154
DVU1392
Position (kb)
1463
1464
1465 Strain fitness (log2 ratio)
-2
-1
0
1 at 1462.685 kb on - strand at 1462.713 kb on + strand at 1462.737 kb on - strand at 1462.758 kb on + strand at 1462.788 kb on + strand at 1462.895 kb on + strand at 1463.005 kb on - strand at 1463.035 kb on - strand, within DVU1390 at 1463.035 kb on - strand, within DVU1390 at 1463.086 kb on + strand, within DVU1390 at 1463.090 kb on - strand, within DVU1390 at 1463.195 kb on + strand, within DVU1390 at 1463.231 kb on - strand, within DVU1390 at 1463.247 kb on + strand, within DVU1390 at 1463.271 kb on + strand, within DVU1390 at 1463.298 kb on - strand, within DVU1390 at 1463.365 kb on - strand, within DVU1390 at 1463.372 kb on - strand, within DVU1390 at 1463.426 kb on - strand at 1463.453 kb on + strand at 1463.553 kb on - strand at 1463.558 kb on + strand at 1463.640 kb on - strand at 1463.687 kb on + strand at 1463.695 kb on - strand at 1463.772 kb on - strand, within DORF10920 at 1463.947 kb on - strand, within DORF10920 at 1463.996 kb on + strand, within DORF10920 at 1464.167 kb on + strand at 1464.268 kb on - strand at 1464.272 kb on + strand at 1464.378 kb on + strand at 1464.400 kb on - strand at 1464.400 kb on - strand at 1464.417 kb on + strand at 1464.425 kb on - strand at 1464.460 kb on - strand at 1464.827 kb on + strand, within DVU1392 at 1464.858 kb on + strand, within DVU1392 at 1464.858 kb on + strand, within DVU1392 at 1464.880 kb on + strand, within DVU1392 at 1464.881 kb on - strand, within DVU1392 at 1465.150 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Chromate 50uM remove 1,462,685 - +0.1 1,462,713 + -0.1 1,462,737 - +0.7 1,462,758 + -0.9 1,462,788 + -1.6 1,462,895 + -1.6 1,463,005 - +0.8 1,463,035 - DVU1390 0.11 -2.0 1,463,035 - DVU1390 0.11 -1.0 1,463,086 + DVU1390 0.22 -0.9 1,463,090 - DVU1390 0.23 +1.7 1,463,195 + DVU1390 0.46 +0.0 1,463,231 - DVU1390 0.53 -1.0 1,463,247 + DVU1390 0.57 +0.3 1,463,271 + DVU1390 0.62 +0.2 1,463,298 - DVU1390 0.68 -0.3 1,463,365 - DVU1390 0.82 +1.1 1,463,372 - DVU1390 0.83 +0.6 1,463,426 - +0.1 1,463,453 + +0.2 1,463,553 - -0.5 1,463,558 + +0.3 1,463,640 - -1.0 1,463,687 + +0.0 1,463,695 - -0.8 1,463,772 - DORF10920 0.21 +0.6 1,463,947 - DORF10920 0.57 +0.6 1,463,996 + DORF10920 0.67 -0.6 1,464,167 + +0.4 1,464,268 - -0.5 1,464,272 + -0.6 1,464,378 + +0.5 1,464,400 - +0.3 1,464,400 - -0.3 1,464,417 + -1.7 1,464,425 - +0.2 1,464,460 - +0.2 1,464,827 + DVU1392 0.54 -0.7 1,464,858 + DVU1392 0.59 -0.5 1,464,858 + DVU1392 0.59 +0.3 1,464,880 + DVU1392 0.62 -0.3 1,464,881 - DVU1392 0.62 -2.4 1,465,150 + -0.5
Or see this region's nucleotide sequence