Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0764 and Synpcc7942_0765 are separated by 243 nucleotides Synpcc7942_0765 and Synpcc7942_0766 are separated by 62 nucleotides Synpcc7942_0766 and Synpcc7942_0767 are separated by 375 nucleotides
Synpcc7942_0764: Synpcc7942_0764 - transcriptional regulator, XRE family, at 757,356 to 757,595
_0764
Synpcc7942_0765: Synpcc7942_0765 - hypothetical protein, at 757,839 to 758,327
_0765
Synpcc7942_0766: Synpcc7942_0766 - DNA-damage-inducible protein, at 758,390 to 759,037
_0766
Synpcc7942_0767: Synpcc7942_0767 - hypothetical protein, at 759,413 to 759,847
_0767
Position (kb) 758
759
760 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 757.453 kb on - strand, within Synpcc7942_0764 at 757.497 kb on + strand, within Synpcc7942_0764 at 757.512 kb on + strand, within Synpcc7942_0764 at 757.547 kb on - strand, within Synpcc7942_0764 at 757.579 kb on - strand at 757.987 kb on + strand, within Synpcc7942_0765 at 758.039 kb on - strand, within Synpcc7942_0765 at 758.079 kb on + strand at 758.093 kb on + strand, within Synpcc7942_0765 at 758.093 kb on + strand, within Synpcc7942_0765 at 758.101 kb on - strand, within Synpcc7942_0765 at 758.122 kb on - strand, within Synpcc7942_0765 at 758.129 kb on + strand, within Synpcc7942_0765 at 758.142 kb on + strand, within Synpcc7942_0765 at 758.172 kb on + strand, within Synpcc7942_0765 at 758.177 kb on + strand, within Synpcc7942_0765 at 758.188 kb on + strand, within Synpcc7942_0765 at 758.212 kb on + strand, within Synpcc7942_0765 at 758.227 kb on + strand, within Synpcc7942_0765 at 758.242 kb on + strand, within Synpcc7942_0765 at 758.255 kb on - strand, within Synpcc7942_0765 at 758.257 kb on + strand, within Synpcc7942_0765 at 758.258 kb on - strand, within Synpcc7942_0765 at 758.265 kb on + strand, within Synpcc7942_0765 at 758.270 kb on + strand, within Synpcc7942_0765 at 758.295 kb on - strand at 758.353 kb on + strand at 758.393 kb on + strand at 758.409 kb on + strand at 758.420 kb on + strand at 758.420 kb on + strand at 758.437 kb on + strand at 758.437 kb on - strand at 758.520 kb on + strand, within Synpcc7942_0766 at 758.520 kb on + strand, within Synpcc7942_0766 at 758.525 kb on + strand, within Synpcc7942_0766 at 758.525 kb on + strand, within Synpcc7942_0766 at 758.528 kb on - strand, within Synpcc7942_0766 at 758.528 kb on - strand, within Synpcc7942_0766 at 758.528 kb on - strand, within Synpcc7942_0766 at 758.542 kb on + strand, within Synpcc7942_0766 at 758.547 kb on + strand, within Synpcc7942_0766 at 758.578 kb on + strand, within Synpcc7942_0766 at 758.603 kb on + strand, within Synpcc7942_0766 at 758.604 kb on - strand, within Synpcc7942_0766 at 758.613 kb on - strand, within Synpcc7942_0766 at 758.614 kb on - strand, within Synpcc7942_0766 at 758.615 kb on + strand, within Synpcc7942_0766 at 758.615 kb on + strand, within Synpcc7942_0766 at 758.616 kb on - strand, within Synpcc7942_0766 at 758.627 kb on + strand, within Synpcc7942_0766 at 758.655 kb on + strand, within Synpcc7942_0766 at 758.657 kb on - strand, within Synpcc7942_0766 at 758.681 kb on + strand, within Synpcc7942_0766 at 758.691 kb on + strand, within Synpcc7942_0766 at 758.703 kb on + strand, within Synpcc7942_0766 at 758.712 kb on + strand, within Synpcc7942_0766 at 758.735 kb on + strand, within Synpcc7942_0766 at 758.740 kb on + strand, within Synpcc7942_0766 at 758.743 kb on - strand, within Synpcc7942_0766 at 758.748 kb on - strand, within Synpcc7942_0766 at 758.750 kb on + strand, within Synpcc7942_0766 at 758.761 kb on + strand, within Synpcc7942_0766 at 758.763 kb on - strand, within Synpcc7942_0766 at 758.767 kb on + strand, within Synpcc7942_0766 at 758.767 kb on + strand, within Synpcc7942_0766 at 758.767 kb on + strand, within Synpcc7942_0766 at 758.768 kb on - strand, within Synpcc7942_0766 at 758.768 kb on - strand, within Synpcc7942_0766 at 758.769 kb on - strand, within Synpcc7942_0766 at 758.779 kb on - strand, within Synpcc7942_0766 at 758.793 kb on - strand, within Synpcc7942_0766 at 758.809 kb on + strand, within Synpcc7942_0766 at 758.818 kb on - strand, within Synpcc7942_0766 at 758.818 kb on - strand, within Synpcc7942_0766 at 758.823 kb on - strand, within Synpcc7942_0766 at 758.835 kb on + strand, within Synpcc7942_0766 at 758.835 kb on + strand, within Synpcc7942_0766 at 758.843 kb on - strand, within Synpcc7942_0766 at 758.845 kb on + strand, within Synpcc7942_0766 at 758.845 kb on + strand, within Synpcc7942_0766 at 758.853 kb on - strand, within Synpcc7942_0766 at 758.853 kb on - strand, within Synpcc7942_0766 at 758.866 kb on - strand at 758.878 kb on + strand, within Synpcc7942_0766 at 758.893 kb on + strand, within Synpcc7942_0766 at 758.911 kb on - strand, within Synpcc7942_0766 at 758.912 kb on + strand, within Synpcc7942_0766 at 758.913 kb on + strand, within Synpcc7942_0766 at 758.913 kb on + strand, within Synpcc7942_0766 at 758.921 kb on + strand, within Synpcc7942_0766 at 758.921 kb on - strand, within Synpcc7942_0766 at 758.921 kb on - strand, within Synpcc7942_0766 at 758.923 kb on + strand, within Synpcc7942_0766 at 758.931 kb on - strand, within Synpcc7942_0766 at 758.970 kb on + strand, within Synpcc7942_0766 at 758.980 kb on + strand at 758.986 kb on - strand at 758.986 kb on - strand at 758.990 kb on + strand at 759.000 kb on + strand at 759.024 kb on + strand at 759.033 kb on + strand at 759.034 kb on - strand at 759.038 kb on + strand at 759.039 kb on - strand at 759.039 kb on - strand at 759.044 kb on + strand at 759.045 kb on + strand at 759.045 kb on + strand at 759.046 kb on - strand at 759.046 kb on - strand at 759.049 kb on - strand at 759.051 kb on - strand at 759.053 kb on - strand at 759.053 kb on - strand at 759.079 kb on + strand at 759.099 kb on + strand at 759.100 kb on + strand at 759.112 kb on - strand at 759.120 kb on - strand at 759.157 kb on - strand at 759.221 kb on + strand at 759.264 kb on - strand at 759.264 kb on - strand at 759.280 kb on + strand at 759.280 kb on + strand at 759.363 kb on + strand at 759.363 kb on + strand at 759.363 kb on + strand at 759.371 kb on - strand at 759.371 kb on - strand at 759.371 kb on - strand at 759.386 kb on + strand at 759.394 kb on - strand at 759.394 kb on - strand at 759.394 kb on - strand at 759.394 kb on - strand at 759.437 kb on - strand at 759.449 kb on + strand at 759.451 kb on + strand at 759.456 kb on + strand at 759.469 kb on - strand, within Synpcc7942_0767 at 759.474 kb on - strand, within Synpcc7942_0767 at 759.487 kb on + strand, within Synpcc7942_0767 at 759.495 kb on - strand, within Synpcc7942_0767 at 759.511 kb on + strand, within Synpcc7942_0767 at 759.519 kb on - strand, within Synpcc7942_0767 at 759.522 kb on + strand, within Synpcc7942_0767 at 759.530 kb on - strand, within Synpcc7942_0767 at 759.530 kb on - strand, within Synpcc7942_0767 at 759.530 kb on - strand, within Synpcc7942_0767 at 759.530 kb on - strand, within Synpcc7942_0767 at 759.536 kb on + strand, within Synpcc7942_0767 at 759.537 kb on - strand, within Synpcc7942_0767 at 759.570 kb on + strand, within Synpcc7942_0767 at 759.573 kb on - strand, within Synpcc7942_0767 at 759.573 kb on - strand, within Synpcc7942_0767 at 759.578 kb on - strand, within Synpcc7942_0767 at 759.584 kb on - strand, within Synpcc7942_0767 at 759.629 kb on + strand, within Synpcc7942_0767 at 759.653 kb on + strand, within Synpcc7942_0767 at 759.653 kb on + strand, within Synpcc7942_0767 at 759.698 kb on + strand, within Synpcc7942_0767 at 759.698 kb on + strand, within Synpcc7942_0767 at 759.698 kb on + strand, within Synpcc7942_0767 at 759.698 kb on + strand, within Synpcc7942_0767 at 759.706 kb on - strand, within Synpcc7942_0767 at 759.711 kb on + strand, within Synpcc7942_0767 at 759.711 kb on - strand, within Synpcc7942_0767 at 759.730 kb on + strand, within Synpcc7942_0767 at 759.730 kb on + strand, within Synpcc7942_0767 at 759.738 kb on - strand, within Synpcc7942_0767 at 759.785 kb on - strand, within Synpcc7942_0767 at 759.814 kb on + strand at 759.834 kb on - strand at 759.913 kb on - strand at 759.961 kb on + strand at 759.973 kb on + strand at 759.978 kb on + strand at 760.015 kb on + strand at 760.015 kb on + strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand at 760.023 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 757,453 - Synpcc7942_0764 0.40 -2.0 757,497 + Synpcc7942_0764 0.59 -0.4 757,512 + Synpcc7942_0764 0.65 -1.4 757,547 - Synpcc7942_0764 0.80 -1.9 757,579 - -0.1 757,987 + Synpcc7942_0765 0.30 -0.3 758,039 - Synpcc7942_0765 0.41 -0.3 758,079 + -0.2 758,093 + Synpcc7942_0765 0.52 -1.8 758,093 + Synpcc7942_0765 0.52 +0.5 758,101 - Synpcc7942_0765 0.54 -0.5 758,122 - Synpcc7942_0765 0.58 -0.6 758,129 + Synpcc7942_0765 0.59 -0.5 758,142 + Synpcc7942_0765 0.62 +2.4 758,172 + Synpcc7942_0765 0.68 +1.7 758,177 + Synpcc7942_0765 0.69 -1.4 758,188 + Synpcc7942_0765 0.71 +3.7 758,212 + Synpcc7942_0765 0.76 +1.7 758,227 + Synpcc7942_0765 0.79 -0.4 758,242 + Synpcc7942_0765 0.82 -1.1 758,255 - Synpcc7942_0765 0.85 -0.0 758,257 + Synpcc7942_0765 0.85 -0.1 758,258 - Synpcc7942_0765 0.86 +3.1 758,265 + Synpcc7942_0765 0.87 +1.0 758,270 + Synpcc7942_0765 0.88 +0.9 758,295 - +0.4 758,353 + +0.4 758,393 + -1.0 758,409 + +1.7 758,420 + +1.4 758,420 + +0.9 758,437 + +1.9 758,437 - -0.0 758,520 + Synpcc7942_0766 0.20 -0.7 758,520 + Synpcc7942_0766 0.20 -1.0 758,525 + Synpcc7942_0766 0.21 +1.2 758,525 + Synpcc7942_0766 0.21 -1.7 758,528 - Synpcc7942_0766 0.21 +0.1 758,528 - Synpcc7942_0766 0.21 +1.5 758,528 - Synpcc7942_0766 0.21 +0.1 758,542 + Synpcc7942_0766 0.23 +0.0 758,547 + Synpcc7942_0766 0.24 -1.6 758,578 + Synpcc7942_0766 0.29 -1.0 758,603 + Synpcc7942_0766 0.33 +0.3 758,604 - Synpcc7942_0766 0.33 -0.1 758,613 - Synpcc7942_0766 0.34 -0.9 758,614 - Synpcc7942_0766 0.35 -1.4 758,615 + Synpcc7942_0766 0.35 +2.2 758,615 + Synpcc7942_0766 0.35 -1.4 758,616 - Synpcc7942_0766 0.35 -2.4 758,627 + Synpcc7942_0766 0.37 -0.2 758,655 + Synpcc7942_0766 0.41 -0.5 758,657 - Synpcc7942_0766 0.41 +0.1 758,681 + Synpcc7942_0766 0.45 -1.0 758,691 + Synpcc7942_0766 0.46 +0.6 758,703 + Synpcc7942_0766 0.48 -1.1 758,712 + Synpcc7942_0766 0.50 -0.6 758,735 + Synpcc7942_0766 0.53 +0.0 758,740 + Synpcc7942_0766 0.54 -0.2 758,743 - Synpcc7942_0766 0.54 -0.8 758,748 - Synpcc7942_0766 0.55 +0.4 758,750 + Synpcc7942_0766 0.56 -1.4 758,761 + Synpcc7942_0766 0.57 -1.1 758,763 - Synpcc7942_0766 0.58 +0.3 758,767 + Synpcc7942_0766 0.58 -0.3 758,767 + Synpcc7942_0766 0.58 -0.8 758,767 + Synpcc7942_0766 0.58 -2.1 758,768 - Synpcc7942_0766 0.58 +0.6 758,768 - Synpcc7942_0766 0.58 -1.6 758,769 - Synpcc7942_0766 0.58 -1.4 758,779 - Synpcc7942_0766 0.60 +1.2 758,793 - Synpcc7942_0766 0.62 -0.3 758,809 + Synpcc7942_0766 0.65 -0.5 758,818 - Synpcc7942_0766 0.66 -0.6 758,818 - Synpcc7942_0766 0.66 -0.3 758,823 - Synpcc7942_0766 0.67 +0.0 758,835 + Synpcc7942_0766 0.69 +1.2 758,835 + Synpcc7942_0766 0.69 -2.6 758,843 - Synpcc7942_0766 0.70 -0.4 758,845 + Synpcc7942_0766 0.70 -0.6 758,845 + Synpcc7942_0766 0.70 +1.3 758,853 - Synpcc7942_0766 0.71 +2.3 758,853 - Synpcc7942_0766 0.71 -0.1 758,866 - +0.3 758,878 + Synpcc7942_0766 0.75 +1.4 758,893 + Synpcc7942_0766 0.78 +0.6 758,911 - Synpcc7942_0766 0.80 +1.8 758,912 + Synpcc7942_0766 0.81 -1.3 758,913 + Synpcc7942_0766 0.81 -0.9 758,913 + Synpcc7942_0766 0.81 +1.5 758,921 + Synpcc7942_0766 0.82 -0.1 758,921 - Synpcc7942_0766 0.82 -1.0 758,921 - Synpcc7942_0766 0.82 -0.8 758,923 + Synpcc7942_0766 0.82 -1.1 758,931 - Synpcc7942_0766 0.83 -3.2 758,970 + Synpcc7942_0766 0.90 -2.0 758,980 + -0.7 758,986 - +2.2 758,986 - -0.7 758,990 + -0.3 759,000 + +1.4 759,024 + +1.5 759,033 + +2.8 759,034 - +2.4 759,038 + -0.3 759,039 - +1.7 759,039 - -0.0 759,044 + +0.0 759,045 + -0.7 759,045 + +1.4 759,046 - +0.0 759,046 - -0.3 759,049 - +2.3 759,051 - -0.8 759,053 - -1.2 759,053 - -0.5 759,079 + -0.5 759,099 + -1.7 759,100 + -0.3 759,112 - -0.5 759,120 - -1.1 759,157 - -0.6 759,221 + -0.6 759,264 - +2.4 759,264 - -1.6 759,280 + +1.3 759,280 + +0.9 759,363 + -1.0 759,363 + -0.6 759,363 + -1.0 759,371 - -1.5 759,371 - +1.5 759,371 - -1.5 759,386 + +1.0 759,394 - -1.6 759,394 - -0.2 759,394 - -0.7 759,394 - +2.3 759,437 - -0.2 759,449 + -0.6 759,451 + -0.5 759,456 + -0.1 759,469 - Synpcc7942_0767 0.13 -0.5 759,474 - Synpcc7942_0767 0.14 +1.8 759,487 + Synpcc7942_0767 0.17 +1.5 759,495 - Synpcc7942_0767 0.19 +0.0 759,511 + Synpcc7942_0767 0.23 -1.6 759,519 - Synpcc7942_0767 0.24 -0.4 759,522 + Synpcc7942_0767 0.25 -1.4 759,530 - Synpcc7942_0767 0.27 -0.5 759,530 - Synpcc7942_0767 0.27 -0.3 759,530 - Synpcc7942_0767 0.27 +1.2 759,530 - Synpcc7942_0767 0.27 +0.8 759,536 + Synpcc7942_0767 0.28 -0.3 759,537 - Synpcc7942_0767 0.29 -1.4 759,570 + Synpcc7942_0767 0.36 +1.7 759,573 - Synpcc7942_0767 0.37 -1.0 759,573 - Synpcc7942_0767 0.37 +0.4 759,578 - Synpcc7942_0767 0.38 -0.7 759,584 - Synpcc7942_0767 0.39 -0.8 759,629 + Synpcc7942_0767 0.50 -4.1 759,653 + Synpcc7942_0767 0.55 -0.2 759,653 + Synpcc7942_0767 0.55 -0.6 759,698 + Synpcc7942_0767 0.66 +1.3 759,698 + Synpcc7942_0767 0.66 +0.5 759,698 + Synpcc7942_0767 0.66 -1.0 759,698 + Synpcc7942_0767 0.66 -0.3 759,706 - Synpcc7942_0767 0.67 +0.2 759,711 + Synpcc7942_0767 0.69 -0.3 759,711 - Synpcc7942_0767 0.69 -0.4 759,730 + Synpcc7942_0767 0.73 +0.1 759,730 + Synpcc7942_0767 0.73 +0.2 759,738 - Synpcc7942_0767 0.75 -1.2 759,785 - Synpcc7942_0767 0.86 +1.7 759,814 + -1.7 759,834 - -1.1 759,913 - +0.5 759,961 + +1.0 759,973 + -1.0 759,978 + -1.4 760,015 + +2.0 760,015 + +1.7 760,023 - -1.0 760,023 - -0.7 760,023 - +1.4 760,023 - -0.3 760,023 - -1.5 760,023 - -1.1 760,023 - +1.2 760,023 - +1.3 760,023 - +0.6
Or see this region's nucleotide sequence