Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5190

Experiment: Spectinomycin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.01 mg/ml
5,984,788	+		Pf6N2E2_5188	0.15	+0.3
5,984,788	+		Pf6N2E2_5188	0.15	+2.1
5,984,797	+		Pf6N2E2_5188	0.17	-0.0
5,984,798	-		Pf6N2E2_5188	0.17	+1.2
5,984,846	-		Pf6N2E2_5188	0.27	+1.2
5,985,004	+		Pf6N2E2_5188	0.62	+0.2
5,985,004	+		Pf6N2E2_5188	0.62	+0.0
5,985,004	+		Pf6N2E2_5188	0.62	-0.2
5,985,005	-		Pf6N2E2_5188	0.62	-0.3
5,985,005	-		Pf6N2E2_5188	0.62	-0.8
5,985,070	+		Pf6N2E2_5188	0.77	+0.1
5,985,070	+		Pf6N2E2_5188	0.77	+0.6
5,985,112	+		Pf6N2E2_5188	0.86	-1.5
5,985,295	-		Pf6N2E2_5189	0.17	-0.8
5,985,643	+				+0.4
5,985,644	-				+0.1
5,985,655	+				+0.1
5,985,655	+				-0.9
5,985,656	-				+0.2
5,985,742	+				-0.3
5,985,742	+				+0.2
5,985,742	+				+0.7
5,985,742	+				+0.1
5,985,773	+				-1.4
5,985,773	+				-0.9
5,985,773	+				-0.1
5,985,774	-				-1.2
5,985,790	-				-1.1
5,985,871	+		Pf6N2E2_5190	0.17	-1.8
5,985,947	+		Pf6N2E2_5190	0.29	-0.7
5,985,947	+		Pf6N2E2_5190	0.29	-1.0
5,985,947	+		Pf6N2E2_5190	0.29	-0.8
5,985,947	+		Pf6N2E2_5190	0.29	-1.6
5,985,948	-		Pf6N2E2_5190	0.29	-1.4
5,985,948	-		Pf6N2E2_5190	0.29	+1.1
5,985,948	-		Pf6N2E2_5190	0.29	-1.5
5,985,968	+		Pf6N2E2_5190	0.32	-1.2
5,985,968	+		Pf6N2E2_5190	0.32	-2.0
5,985,968	+		Pf6N2E2_5190	0.32	-2.3
5,985,968	+		Pf6N2E2_5190	0.32	-0.7
5,985,968	+		Pf6N2E2_5190	0.32	-1.9
5,985,968	+		Pf6N2E2_5190	0.32	-2.0
5,985,968	+		Pf6N2E2_5190	0.32	-0.6
5,985,969	-		Pf6N2E2_5190	0.32	-2.2
5,985,969	-		Pf6N2E2_5190	0.32	-0.3
5,985,969	-		Pf6N2E2_5190	0.32	-0.6
5,985,969	-		Pf6N2E2_5190	0.32	+2.1
5,985,969	-		Pf6N2E2_5190	0.32	-1.0
5,985,969	-		Pf6N2E2_5190	0.32	-0.7
5,985,969	-		Pf6N2E2_5190	0.32	-1.6
5,985,969	-		Pf6N2E2_5190	0.32	-1.9
5,986,141	+		Pf6N2E2_5190	0.59	-2.5
5,986,142	-		Pf6N2E2_5190	0.59	-1.0
5,986,142	-		Pf6N2E2_5190	0.59	-1.5
5,986,142	-		Pf6N2E2_5190	0.59	+0.2
5,986,142	-		Pf6N2E2_5190	0.59	-0.2
5,986,144	+		Pf6N2E2_5190	0.59	-0.1
5,986,144	+		Pf6N2E2_5190	0.59	-1.2
5,986,144	+		Pf6N2E2_5190	0.59	-1.6
5,986,144	+		Pf6N2E2_5190	0.59	-0.5
5,986,145	-		Pf6N2E2_5190	0.59	-1.5
5,986,145	-		Pf6N2E2_5190	0.59	-0.8
5,986,145	-		Pf6N2E2_5190	0.59	-0.9
5,986,245	+		Pf6N2E2_5190	0.75	-1.0
5,986,245	+		Pf6N2E2_5190	0.75	-1.0
5,986,306	+		Pf6N2E2_5190	0.84	-1.9
5,986,306	+		Pf6N2E2_5190	0.84	-1.4
5,986,307	-		Pf6N2E2_5190	0.84	-0.6
5,986,307	-		Pf6N2E2_5190	0.84	-2.3
5,986,307	-		Pf6N2E2_5190	0.84	+0.1
5,986,516	-		Pf6N2E2_5191	0.19	-0.4
5,986,516	-		Pf6N2E2_5191	0.19	+0.5
5,986,516	-		Pf6N2E2_5191	0.19	+0.6
5,986,545	+		Pf6N2E2_5191	0.24	+1.2
5,986,569	+		Pf6N2E2_5191	0.29	-0.2
5,986,643	+		Pf6N2E2_5191	0.43	+0.4
5,986,643	+		Pf6N2E2_5191	0.43	+0.2
5,986,643	+		Pf6N2E2_5191	0.43	+0.5
5,986,644	-		Pf6N2E2_5191	0.43	+0.1
5,986,692	+		Pf6N2E2_5191	0.52	-0.3
5,986,692	+		Pf6N2E2_5191	0.52	+0.6
5,986,692	+		Pf6N2E2_5191	0.52	-0.4
5,986,692	+		Pf6N2E2_5191	0.52	-0.1
5,986,692	+		Pf6N2E2_5191	0.52	-0.0
5,986,692	+		Pf6N2E2_5191	0.52	-0.1
5,986,692	+		Pf6N2E2_5191	0.52	-0.1
5,986,692	+		Pf6N2E2_5191	0.52	+0.2
5,986,692	+		Pf6N2E2_5191	0.52	+0.4
5,986,692	+		Pf6N2E2_5191	0.52	+0.2
5,986,692	+		Pf6N2E2_5191	0.52	-0.6
5,986,692	+		Pf6N2E2_5191	0.52	+0.2
5,986,692	+		Pf6N2E2_5191	0.52	+0.2
5,986,692	+		Pf6N2E2_5191	0.52	+0.2
5,986,692	+		Pf6N2E2_5191	0.52	+0.1
5,986,692	+		Pf6N2E2_5191	0.52	-0.4
5,986,692	+		Pf6N2E2_5191	0.52	+0.6
5,986,692	+		Pf6N2E2_5191	0.52	+1.0
5,986,692	+		Pf6N2E2_5191	0.52	+0.4
5,986,692	+		Pf6N2E2_5191	0.52	-1.2
5,986,692	+		Pf6N2E2_5191	0.52	+0.3
5,986,693	-		Pf6N2E2_5191	0.52	-0.7
5,986,693	-		Pf6N2E2_5191	0.52	+0.7
5,986,693	-		Pf6N2E2_5191	0.52	+0.8
5,986,693	-		Pf6N2E2_5191	0.52	+0.8
5,986,693	-		Pf6N2E2_5191	0.52	-1.5
5,986,693	-		Pf6N2E2_5191	0.52	-0.9
5,986,693	-		Pf6N2E2_5191	0.52	+0.3
5,986,693	-		Pf6N2E2_5191	0.52	-0.9
5,986,693	-		Pf6N2E2_5191	0.52	+0.1
5,986,693	-		Pf6N2E2_5191	0.52	-0.4
5,986,693	-		Pf6N2E2_5191	0.52	-0.2
5,986,693	-		Pf6N2E2_5191	0.52	-2.5
5,986,894	-				+0.5
5,986,894	-				-0.4
5,986,939	+				-0.1
5,986,939	+				+0.1
5,986,939	+				+0.6
5,986,940	-				+0.5
5,986,964	+				-0.1
5,987,022	+				-0.2
5,987,022	+				-1.3
5,987,023	-				+0.2
5,987,050	+				-0.5
5,987,050	+				+0.7
5,987,050	+				+0.3
5,987,050	+				-0.7
5,987,050	+				-0.8
5,987,050	+				-0.5
5,987,050	+				+0.2
5,987,051	-				-0.9
5,987,051	-				+0.6
5,987,051	-				+0.6
5,987,051	-				-0.0
5,987,051	-				-0.7
5,987,051	-				-0.1
5,987,051	-				+0.4
5,987,156	-				+0.2
5,987,243	+		Pf6N2E2_5192	0.10	-0.3
5,987,243	+		Pf6N2E2_5192	0.10	+1.2
5,987,243	+		Pf6N2E2_5192	0.10	-1.1
5,987,243	+		Pf6N2E2_5192	0.10	-1.5