Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1660

Experiment: Spectinomycin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.01 mg/ml
1,963,664	+		Pf6N2E2_1657	0.73	+0.2
1,963,665	-		Pf6N2E2_1657	0.73	+0.5
1,963,678	+		Pf6N2E2_1657	0.74	-0.1
1,963,679	-		Pf6N2E2_1657	0.74	+0.5
1,963,679	-		Pf6N2E2_1657	0.74	-0.5
1,963,799	+		Pf6N2E2_1657	0.84	+0.5
1,963,799	+		Pf6N2E2_1657	0.84	-0.2
1,963,799	+		Pf6N2E2_1657	0.84	-0.0
1,963,835	+		Pf6N2E2_1657	0.87	+0.5
1,963,869	+		Pf6N2E2_1657	0.90	+0.2
1,963,869	+		Pf6N2E2_1657	0.90	+1.2
1,963,869	+		Pf6N2E2_1657	0.90	+0.8
1,963,869	+		Pf6N2E2_1657	0.90	-0.4
1,963,869	+		Pf6N2E2_1657	0.90	+0.1
1,963,869	+		Pf6N2E2_1657	0.90	-0.6
1,963,869	+		Pf6N2E2_1657	0.90	-0.5
1,963,870	-		Pf6N2E2_1657	0.90	-0.5
1,963,870	-		Pf6N2E2_1657	0.90	-0.1
1,963,870	-		Pf6N2E2_1657	0.90	+0.3
1,963,870	-		Pf6N2E2_1657	0.90	-1.5
1,963,870	-		Pf6N2E2_1657	0.90	+0.2
1,963,870	-		Pf6N2E2_1657	0.90	-0.5
1,963,870	-		Pf6N2E2_1657	0.90	+0.7
1,963,870	-		Pf6N2E2_1657	0.90	-0.0
1,963,870	-		Pf6N2E2_1657	0.90	-1.0
1,963,870	-		Pf6N2E2_1657	0.90	+0.8
1,963,949	+				+0.9
1,963,949	+				-0.0
1,963,950	-				+0.4
1,963,979	+				-0.4
1,963,980	-				-0.9
1,963,980	-				-0.1
1,964,001	+				+0.8
1,964,097	-				+0.1
1,964,302	-				-0.2
1,964,313	-				-0.2
1,964,313	-				+0.2
1,964,366	-		Pf6N2E2_1659	0.21	-0.7
1,964,481	-				-0.4
1,964,481	-				-1.6
1,964,502	-				-3.4
1,964,723	+		Pf6N2E2_1660	0.13	-4.2
1,964,723	+		Pf6N2E2_1660	0.13	-1.1
1,964,723	+		Pf6N2E2_1660	0.13	-1.7
1,965,105	+		Pf6N2E2_1660	0.46	-2.7
1,965,736	+				-1.1
1,965,736	+				-2.5
1,965,737	-				-3.5
1,965,737	-				-2.7
1,965,737	-				-1.1
1,965,877	+				-2.4
1,965,970	+				-4.1
1,966,485	-		Pf6N2E2_1661	0.24	-1.4
1,966,485	-		Pf6N2E2_1661	0.24	-3.0
1,966,485	-		Pf6N2E2_1661	0.24	-3.4
1,966,485	-		Pf6N2E2_1661	0.24	-3.0
1,966,562	-		Pf6N2E2_1661	0.26	-2.9
1,966,684	+		Pf6N2E2_1661	0.30	-1.9
1,966,685	-		Pf6N2E2_1661	0.30	-4.1
1,966,705	+		Pf6N2E2_1661	0.31	-3.0