Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03146

Experiment: PYE 4C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep3 28 days
3,298,454	-				-2.0
3,298,487	+				-2.3
3,298,503	-				+1.0
3,298,513	-				-1.7
3,298,535	-				-0.5
3,298,535	-				-1.0
3,298,535	-				+0.4
3,298,571	+				-0.4
3,298,591	-				-0.1
3,298,599	-				+1.7
3,298,608	+				-1.2
3,298,630	-				+0.9
3,298,653	+				+0.6
3,298,690	+				-1.8
3,298,701	+				-0.3
3,298,701	+				-1.7
3,298,701	+				+5.8
3,298,701	+				+0.5
3,298,709	-				-0.3
3,298,709	-				-3.2
3,298,730	-				+1.8
3,298,765	-				-3.5
3,298,836	+				-0.7
3,298,836	+				+0.9
3,298,836	+				+0.6
3,298,844	-				+1.3
3,298,862	+				-1.1
3,298,870	-				+2.0
3,298,881	-				-1.1
3,298,883	+				+0.9
3,298,891	-				-0.6
3,298,897	+				-2.1
3,298,913	+				-0.8
3,298,915	-				-0.5
3,298,915	-				-0.3
3,299,032	+				+0.0
3,299,053	-		CCNA_03146	0.11	+1.6
3,299,088	+		CCNA_03146	0.13	+1.1
3,299,088	+		CCNA_03146	0.13	-2.7
3,299,088	+		CCNA_03146	0.13	+4.1
3,299,099	+		CCNA_03146	0.13	-2.5
3,299,155	-		CCNA_03146	0.16	-1.0
3,299,190	-		CCNA_03146	0.18	+0.7
3,299,217	+		CCNA_03146	0.19	+0.2
3,299,317	-		CCNA_03146	0.24	-1.7
3,299,344	+		CCNA_03146	0.26	+2.5
3,299,364	-		CCNA_03146	0.27	-1.6
3,299,380	-		CCNA_03146	0.28	+1.5
3,299,412	-		CCNA_03146	0.29	-0.5
3,299,422	+		CCNA_03146	0.30	+3.7
3,299,430	-		CCNA_03146	0.30	+2.5
3,299,439	+		CCNA_03146	0.31	+1.0
3,299,447	-		CCNA_03146	0.31	-2.0
3,299,456	+		CCNA_03146	0.31	-1.2
3,299,456	+		CCNA_03146	0.31	+0.5
3,299,456	+		CCNA_03146	0.31	-1.0
3,299,464	-		CCNA_03146	0.32	+0.2
3,299,465	-		CCNA_03146	0.32	+0.4
3,299,476	+		CCNA_03146	0.32	+2.2
3,299,476	+		CCNA_03146	0.32	-0.4
3,299,476	-		CCNA_03146	0.32	+0.1
3,299,484	-		CCNA_03146	0.33	-0.1
3,299,484	-		CCNA_03146	0.33	+0.5
3,299,484	-		CCNA_03146	0.33	-2.4
3,299,484	-		CCNA_03146	0.33	-1.1
3,299,485	-		CCNA_03146	0.33	-0.7
3,299,510	-		CCNA_03146	0.34	-0.3
3,299,534	+		CCNA_03146	0.35	-2.8
3,299,548	+		CCNA_03146	0.36	+0.5
3,299,548	+		CCNA_03146	0.36	-2.0
3,299,556	-		CCNA_03146	0.37	+2.6
3,299,568	+		CCNA_03146	0.37	+2.2
3,299,570	-		CCNA_03146	0.37	+0.2
3,299,577	+		CCNA_03146	0.38	-0.1
3,299,579	+		CCNA_03146	0.38	+2.5
3,299,585	-		CCNA_03146	0.38	+0.9
3,299,609	+		CCNA_03146	0.39	-2.2
3,299,615	+		CCNA_03146	0.40	+1.4
3,299,615	+		CCNA_03146	0.40	+1.1
3,299,615	+		CCNA_03146	0.40	-0.7
3,299,615	+		CCNA_03146	0.40	-1.2
3,299,617	-		CCNA_03146	0.40	-1.8
3,299,623	-		CCNA_03146	0.40	+2.5
3,299,660	+		CCNA_03146	0.42	-1.1
3,299,668	-		CCNA_03146	0.42	-0.4
3,299,669	-		CCNA_03146	0.42	+2.5
3,299,670	-		CCNA_03146	0.42	-0.8
3,299,670	-		CCNA_03146	0.42	+0.2
3,299,670	-		CCNA_03146	0.42	-0.5
3,299,717	+		CCNA_03146	0.45	+0.4
3,299,734	+		CCNA_03146	0.46	+1.9
3,299,737	-		CCNA_03146	0.46	-0.7
3,299,748	-		CCNA_03146	0.46	-0.1
3,299,748	-		CCNA_03146	0.46	-2.7
3,299,783	+		CCNA_03146	0.48	+0.9
3,299,785	+		CCNA_03146	0.48	+0.8
3,299,799	+		CCNA_03146	0.49	+2.2
3,299,799	+		CCNA_03146	0.49	+0.2
3,299,829	+		CCNA_03146	0.50	+1.0
3,299,854	-		CCNA_03146	0.52	+0.9
3,299,856	+		CCNA_03146	0.52	-0.1
3,299,869	-		CCNA_03146	0.52	-2.2
3,299,879	+		CCNA_03146	0.53	+1.1
3,299,895	-		CCNA_03146	0.54	-1.7
3,299,900	-		CCNA_03146	0.54	+1.3
3,299,916	+		CCNA_03146	0.55	+1.3
3,299,916	+		CCNA_03146	0.55	+1.7
3,299,921	+		CCNA_03146	0.55	-3.8
3,299,940	-		CCNA_03146	0.56	-0.7
3,299,943	+		CCNA_03146	0.56	+0.6
3,299,945	-		CCNA_03146	0.56	-1.1
3,299,948	+		CCNA_03146	0.57	+2.9
3,299,948	+		CCNA_03146	0.57	+1.1
3,299,956	+		CCNA_03146	0.57	+2.9
3,299,956	-		CCNA_03146	0.57	-0.8
3,299,994	-		CCNA_03146	0.59	+0.2
3,300,008	+		CCNA_03146	0.60	+1.7
3,300,008	-		CCNA_03146	0.60	-1.7
3,300,016	-		CCNA_03146	0.60	-0.3
3,300,030	+		CCNA_03146	0.61	-0.2
3,300,038	-		CCNA_03146	0.61	-0.3
3,300,038	-		CCNA_03146	0.61	+0.0
3,300,066	+		CCNA_03146	0.63	+1.5
3,300,066	+		CCNA_03146	0.63	-1.3
3,300,066	+		CCNA_03146	0.63	-1.4
3,300,066	+		CCNA_03146	0.63	+0.8
3,300,066	+		CCNA_03146	0.63	+2.5
3,300,066	+		CCNA_03146	0.63	+1.5
3,300,074	-		CCNA_03146	0.63	-2.5
3,300,074	-		CCNA_03146	0.63	-0.7
3,300,074	-		CCNA_03146	0.63	-0.2
3,300,074	-		CCNA_03146	0.63	+2.4
3,300,074	-		CCNA_03146	0.63	-0.1
3,300,074	-		CCNA_03146	0.63	+0.1
3,300,074	-		CCNA_03146	0.63	-0.8
3,300,074	-		CCNA_03146	0.63	+3.8
3,300,074	-		CCNA_03146	0.63	+1.2
3,300,074	-				-0.3
3,300,079	-		CCNA_03146	0.63	+0.8
3,300,113	+		CCNA_03146	0.65	+0.1
3,300,134	-		CCNA_03146	0.66	-0.1
3,300,143	+		CCNA_03146	0.66	+4.1
3,300,144	-		CCNA_03146	0.67	-2.2
3,300,245	-		CCNA_03146	0.72	+0.6
3,300,258	+		CCNA_03146	0.72	-0.7
3,300,265	-		CCNA_03146	0.73	+1.5
3,300,270	-		CCNA_03146	0.73	+0.6
3,300,270	-		CCNA_03146	0.73	+0.7
3,300,278	-		CCNA_03146	0.73	+1.5
3,300,303	+		CCNA_03146	0.75	-0.7
3,300,311	-		CCNA_03146	0.75	-1.0
3,300,311	-		CCNA_03146	0.75	+2.5
3,300,311	-		CCNA_03146	0.75	+1.5
3,300,311	-		CCNA_03146	0.75	-0.1
3,300,311	-		CCNA_03146	0.75	+0.8
3,300,321	+		CCNA_03146	0.76	-0.6
3,300,321	+		CCNA_03146	0.76	+1.9
3,300,329	-		CCNA_03146	0.76	-1.8
3,300,329	-		CCNA_03146	0.76	-0.3
3,300,329	-		CCNA_03146	0.76	+1.4
3,300,341	+		CCNA_03146	0.77	+1.8
3,300,355	+		CCNA_03146	0.77	-2.8
3,300,362	+		CCNA_03146	0.78	+0.4
3,300,362	+		CCNA_03146	0.78	+0.8
3,300,370	-				-1.5
3,300,375	-		CCNA_03146	0.78	-0.2
3,300,375	-		CCNA_03146	0.78	-1.6
3,300,387	+		CCNA_03146	0.79	-1.6
3,300,413	+		CCNA_03146	0.80	-0.1
3,300,413	+		CCNA_03146	0.80	+0.1
3,300,413	+		CCNA_03146	0.80	+0.3
3,300,413	+		CCNA_03146	0.80	+1.9
3,300,413	+		CCNA_03146	0.80	+0.3
3,300,413	+		CCNA_03146	0.80	+1.7
3,300,413	+		CCNA_03146	0.80	+1.0
3,300,413	+		CCNA_03146	0.80	-1.8
3,300,413	+		CCNA_03146	0.80	-2.4
3,300,413	+		CCNA_03146	0.80	-1.6
3,300,413	+		CCNA_03146	0.80	+2.2
3,300,413	+		CCNA_03146	0.80	-0.1
3,300,421	-		CCNA_03146	0.81	-0.3
3,300,421	-		CCNA_03146	0.81	-0.6
3,300,421	-		CCNA_03146	0.81	-0.5
3,300,421	-		CCNA_03146	0.81	+0.5
3,300,421	-		CCNA_03146	0.81	-0.5
3,300,425	+		CCNA_03146	0.81	+1.9
3,300,440	+		CCNA_03146	0.82	+0.6
3,300,450	+		CCNA_03146	0.82	-0.1
3,300,458	-		CCNA_03146	0.83	+0.9
3,300,474	+		CCNA_03146	0.83	+1.0
3,300,474	+		CCNA_03146	0.83	+0.2
3,300,474	+		CCNA_03146	0.83	-2.7
3,300,474	+		CCNA_03146	0.83	+0.5
3,300,474	+		CCNA_03146	0.83	-0.3
3,300,474	+		CCNA_03146	0.83	+1.0
3,300,474	+		CCNA_03146	0.83	+1.3
3,300,474	+		CCNA_03146	0.83	-0.1
3,300,477	-		CCNA_03146	0.83	-1.0
3,300,479	+		CCNA_03146	0.84	+1.2
3,300,482	-		CCNA_03146	0.84	-0.1
3,300,482	-		CCNA_03146	0.84	-1.4
3,300,482	-		CCNA_03146	0.84	+1.4
3,300,482	-		CCNA_03146	0.84	+0.2
3,300,482	-		CCNA_03146	0.84	-0.1
3,300,482	-		CCNA_03146	0.84	-1.2
3,300,512	-		CCNA_03146	0.85	+4.5
3,300,513	-		CCNA_03146	0.85	+1.2
3,300,548	+		CCNA_03146	0.87	-0.6
3,300,556	-		CCNA_03146	0.88	+2.5
3,300,559	+		CCNA_03146	0.88	-0.2
3,300,577	+		CCNA_03146	0.89	-1.2
3,300,600	+		CCNA_03146	0.90	+0.2
3,300,600	+		CCNA_03146	0.90	-2.5
3,300,600	+		CCNA_03146	0.90	-2.0
3,300,608	-				-1.1
3,300,608	-				-0.2
3,300,608	-				-1.5
3,300,610	-				+1.4
3,300,625	-				-0.5
3,300,625	-				+2.4
3,300,674	+				-0.3
3,300,701	+				-0.7
3,300,706	+				+2.2
3,300,728	+				+0.8
3,300,789	-				-0.5
3,300,796	+				-3.0
3,300,804	-				+1.5
3,300,804	-				+0.6
3,300,839	+				+0.2
3,300,859	-				-0.7
3,300,861	-				-2.8
3,300,884	-				+0.2
3,300,886	+				+0.3
3,300,888	+				-0.7
3,300,903	+				+1.6
3,300,908	+				+1.3
3,300,911	-				-2.5
3,300,927	-				-0.8
3,300,928	+				+0.0
3,300,928	+				-0.7
3,300,936	-				-2.9
3,300,938	-				-2.4
3,300,987	+		CCNA_03147	0.16	+1.3
3,300,991	+		CCNA_03147	0.16	-2.9
3,300,992	+		CCNA_03147	0.16	+1.4
3,300,995	-		CCNA_03147	0.17	+0.5
3,301,000	-		CCNA_03147	0.18	+0.2
3,301,000	-		CCNA_03147	0.18	-1.5
3,301,000	-		CCNA_03147	0.18	+1.0
3,301,000	-		CCNA_03147	0.18	-0.0
3,301,000	-		CCNA_03147	0.18	+1.7
3,301,005	-		CCNA_03147	0.18	+0.9
3,301,033	-		CCNA_03147	0.23	+2.6
3,301,063	+		CCNA_03147	0.28	-1.1
3,301,063	+		CCNA_03147	0.28	-0.2
3,301,063	+		CCNA_03147	0.28	-3.6
3,301,063	+		CCNA_03147	0.28	-1.3
3,301,144	-		CCNA_03147	0.40	-0.8
3,301,144	-		CCNA_03147	0.40	-2.9
3,301,168	+		CCNA_03147	0.44	-1.0
3,301,191	-		CCNA_03147	0.48	-1.9
3,301,209	+		CCNA_03147	0.51	+0.2
3,301,212	-		CCNA_03147	0.51	-1.1
3,301,242	-		CCNA_03147	0.56	-1.6
3,301,248	+		CCNA_03147	0.57	+1.4
3,301,309	-		CCNA_03147	0.67	-0.1
3,301,325	+		CCNA_03147	0.69	-1.9
3,301,330	+		CCNA_03147	0.70	-1.9
3,301,346	+		CCNA_03147	0.73	-2.8
3,301,348	+		CCNA_03147	0.73	-0.5
3,301,348	+		CCNA_03147	0.73	+0.1
3,301,348	+		CCNA_03147	0.73	-0.8
3,301,348	+		CCNA_03147	0.73	+0.5
3,301,348	+		CCNA_03147	0.73	-3.0
3,301,351	-		CCNA_03147	0.73	-0.3
3,301,351	-		CCNA_03147	0.73	+0.7
3,301,356	-		CCNA_03147	0.74	-4.4
3,301,356	-		CCNA_03147	0.74	+0.0
3,301,356	-		CCNA_03147	0.74	-1.1
3,301,385	-		CCNA_03147	0.79	-0.9
3,301,401	+		CCNA_03147	0.81	-0.3
3,301,422	+		CCNA_03147	0.85	-0.2
3,301,429	+		CCNA_03147	0.86	-1.3
3,301,449	+		CCNA_03147	0.89	+0.2
3,301,449	+		CCNA_03147	0.89	+0.7
3,301,449	+		CCNA_03147	0.89	+1.0
3,301,457	-				-3.0
3,301,457	-				-2.2
3,301,457	-				-3.1
3,301,457	-				-0.8
3,301,457	-				-1.1
3,301,457	-				-3.1
3,301,457	-				+1.1
3,301,462	-				+0.9
3,301,507	+				-0.2
3,301,507	+				+0.5
3,301,507	+				-1.0
3,301,507	+				-1.4
3,301,507	+				-1.1
3,301,507	+				-0.8
3,301,507	+				-0.1
3,301,507	+				-1.2
3,301,507	+				-2.3
3,301,507	+				-1.7
3,301,507	+				+0.9
3,301,507	+				+0.4
3,301,512	+				-3.0
3,301,515	-				-1.8
3,301,515	-				+1.2
3,301,515	-				-2.4
3,301,515	-				+1.6
3,301,515	-				-1.9
3,301,515	-				+1.9
3,301,515	-				-2.0
3,301,515	-				-2.0
3,301,515	-				+0.5
3,301,517	+				+0.5
3,301,520	-				-3.4
3,301,525	-				-0.5
3,301,540	+				-1.6
3,301,541	+				-0.9
3,301,541	+				+0.1
3,301,541	+				-1.2
3,301,546	+				-0.5
3,301,548	-				-2.0
3,301,554	-				+2.5
3,301,606	+				+0.8
3,301,619	+				-1.6
3,301,623	+				-0.4
3,301,647	+				+0.2
3,301,664	+				+1.0
3,301,672	-				-0.3
3,301,716	+				-0.6
3,301,730	-				+1.5
3,301,730	-				-0.7
3,301,730	-				-0.1
3,301,734	+				+1.6
3,301,756	+				+0.1
3,301,769	+				+2.5
3,301,769	+				+0.7
3,301,769	+				-1.4
3,301,769	+				+2.3
3,301,769	+				-3.4
3,301,770	-				-0.4
3,301,777	-				+2.5
3,301,777	-				-0.1
3,301,777	-				+0.9
3,301,777	-				-0.3
3,301,777	-				+2.2
3,301,779	+				+0.0
3,301,789	-				+4.7
3,301,789	-				-1.4
3,301,789	-				-1.5
3,301,792	+				-3.0
3,301,795	-				-1.2