Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02727

Experiment: PYE 4C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep3 28 days
2,889,194	-				+0.7
2,889,216	+				-0.6
2,889,246	+				+0.7
2,889,256	+				+2.2
2,889,264	-				-0.9
2,889,276	+				-1.5
2,889,282	-				+0.4
2,889,306	-				-0.4
2,889,338	+				+1.8
2,889,338	+				-1.9
2,889,338	+				-0.1
2,889,338	+				+1.7
2,889,345	+		CCNA_02726	0.11	-1.3
2,889,346	-		CCNA_02726	0.11	+1.1
2,889,346	-		CCNA_02726	0.11	+1.0
2,889,346	-		CCNA_02726	0.11	+0.6
2,889,346	-		CCNA_02726	0.11	+0.3
2,889,346	-		CCNA_02726	0.11	-0.9
2,889,346	-		CCNA_02726	0.11	-3.3
2,889,346	-		CCNA_02726	0.11	+0.1
2,889,346	-		CCNA_02726	0.11	+2.9
2,889,346	-		CCNA_02726	0.11	+0.6
2,889,346	-		CCNA_02726	0.11	+1.0
2,889,346	-		CCNA_02726	0.11	-1.2
2,889,350	+		CCNA_02726	0.12	-2.7
2,889,350	+		CCNA_02726	0.12	-2.5
2,889,358	+		CCNA_02726	0.13	-1.0
2,889,366	-		CCNA_02726	0.15	-2.2
2,889,373	-		CCNA_02726	0.16	+0.3
2,889,393	+		CCNA_02726	0.20	+0.1
2,889,408	+		CCNA_02726	0.23	+0.6
2,889,415	+		CCNA_02726	0.24	-1.9
2,889,416	-		CCNA_02726	0.24	+1.4
2,889,435	+		CCNA_02726	0.28	-0.7
2,889,443	-		CCNA_02726	0.29	+1.2
2,889,443	-		CCNA_02726	0.29	-0.6
2,889,443	-		CCNA_02726	0.29	-0.8
2,889,443	-		CCNA_02726	0.29	+3.1
2,889,443	-		CCNA_02726	0.29	-0.5
2,889,443	-		CCNA_02726	0.29	-0.1
2,889,443	-		CCNA_02726	0.29	+0.1
2,889,444	-		CCNA_02726	0.30	-1.0
2,889,484	-		CCNA_02726	0.37	-0.7
2,889,484	-		CCNA_02726	0.37	+1.1
2,889,488	-		CCNA_02726	0.38	-1.8
2,889,497	+		CCNA_02726	0.40	-0.1
2,889,505	-		CCNA_02726	0.41	-1.4
2,889,505	-		CCNA_02726	0.41	-0.2
2,889,511	+		CCNA_02726	0.42	+1.7
2,889,511	+		CCNA_02726	0.42	+2.7
2,889,519	-		CCNA_02726	0.44	-2.8
2,889,533	+		CCNA_02726	0.46	-0.7
2,889,548	+		CCNA_02726	0.49	-1.8
2,889,548	+		CCNA_02726	0.49	+1.9
2,889,556	+		CCNA_02726	0.51	+1.7
2,889,556	+		CCNA_02726	0.51	-0.3
2,889,556	-		CCNA_02726	0.51	+1.7
2,889,566	-		CCNA_02726	0.53	-0.1
2,889,593	+		CCNA_02726	0.58	-1.3
2,889,593	+		CCNA_02726	0.58	-0.1
2,889,593	+		CCNA_02726	0.58	+0.4
2,889,593	+		CCNA_02726	0.58	-0.7
2,889,593	+		CCNA_02726	0.58	-1.8
2,889,601	-		CCNA_02726	0.59	+0.3
2,889,601	-				+1.1
2,889,601	-		CCNA_02726	0.59	-1.0
2,889,601	-		CCNA_02726	0.59	+2.5
2,889,601	-		CCNA_02726	0.59	+2.0
2,889,613	-		CCNA_02726	0.61	+0.9
2,889,613	-		CCNA_02726	0.61	+0.7
2,889,630	-		CCNA_02726	0.65	-0.3
2,889,630	-		CCNA_02726	0.65	-1.1
2,889,630	-		CCNA_02726	0.65	-2.4
2,889,632	+		CCNA_02726	0.65	+1.1
2,889,632	+		CCNA_02726	0.65	-1.4
2,889,632	+		CCNA_02726	0.65	+2.7
2,889,640	-		CCNA_02726	0.66	-0.7
2,889,640	-		CCNA_02726	0.66	-1.1
2,889,647	-		CCNA_02726	0.68	+0.7
2,889,693	-		CCNA_02726	0.76	+2.7
2,889,764	-		CCNA_02726	0.90	+2.7
2,889,803	+				-1.4
2,889,812	-				-0.1
2,889,821	-				-2.1
2,889,945	-				+0.4
2,889,959	+				+1.7
2,889,996	-				-2.2
2,890,016	-		CCNA_03973	0.12	+0.4
2,890,018	-		CCNA_03973	0.13	+0.1
2,890,018	-		CCNA_03973	0.13	+0.2
2,890,044	-		CCNA_03973	0.30	-1.0
2,890,100	-		CCNA_03973	0.65	-0.2
2,890,104	+		CCNA_03973	0.67	+1.5
2,890,105	+		CCNA_03973	0.68	+0.4
2,890,192	+				+0.7
2,890,200	-				+0.7
2,890,204	-				+4.7
2,890,263	+		CCNA_02727	0.15	+0.4
2,890,263	+		CCNA_02727	0.15	-3.0
2,890,263	+		CCNA_02727	0.15	+0.2
2,890,263	+		CCNA_02727	0.15	-2.0
2,890,263	+		CCNA_02727	0.15	+3.8
2,890,263	+		CCNA_02727	0.15	+1.6
2,890,271	-		CCNA_02727	0.16	-2.4
2,890,274	+		CCNA_02727	0.17	-0.8
2,890,277	-		CCNA_02727	0.17	+1.0
2,890,281	+		CCNA_02727	0.17	+0.9
2,890,282	-		CCNA_02727	0.18	-0.2
2,890,287	+		CCNA_02727	0.18	-2.8
2,890,297	+		CCNA_02727	0.20	-0.6
2,890,302	+		CCNA_02727	0.20	-1.3
2,890,305	-		CCNA_02727	0.21	+0.3
2,890,315	-		CCNA_02727	0.22	-0.9
2,890,328	+		CCNA_02727	0.23	-2.1
2,890,355	+		CCNA_02727	0.27	-2.1
2,890,355	+		CCNA_02727	0.27	-1.2
2,890,363	-		CCNA_02727	0.28	-0.5
2,890,389	+		CCNA_02727	0.31	-2.0
2,890,389	+		CCNA_02727	0.31	+2.5
2,890,397	-		CCNA_02727	0.32	-1.9
2,890,398	-		CCNA_02727	0.32	-1.1
2,890,403	-		CCNA_02727	0.33	+1.7
2,890,405	+		CCNA_02727	0.33	-2.9
2,890,423	-		CCNA_02727	0.35	-0.6
2,890,430	+		CCNA_02727	0.36	-0.9
2,890,430	+		CCNA_02727	0.36	+0.1
2,890,430	+		CCNA_02727	0.36	-2.4
2,890,430	+		CCNA_02727	0.36	-2.1
2,890,430	+		CCNA_02727	0.36	-3.8
2,890,430	+		CCNA_02727	0.36	-3.2
2,890,430	+		CCNA_02727	0.36	+0.5
2,890,430	+		CCNA_02727	0.36	+0.0
2,890,430	+		CCNA_02727	0.36	+0.1
2,890,438	-		CCNA_02727	0.37	-0.3
2,890,438	-		CCNA_02727	0.37	-1.5
2,890,438	-		CCNA_02727	0.37	+0.1
2,890,438	-		CCNA_02727	0.37	-1.6
2,890,438	-		CCNA_02727	0.37	-1.6
2,890,456	-		CCNA_02727	0.40	-0.1
2,890,489	-		CCNA_02727	0.44	-0.8
2,890,551	+		CCNA_02727	0.52	+2.3
2,890,568	+		CCNA_02727	0.54	+1.1
2,890,575	+		CCNA_02727	0.55	+1.4
2,890,646	+		CCNA_02727	0.64	-0.0
2,890,668	+		CCNA_02727	0.67	-0.8
2,890,668	+		CCNA_02727	0.67	+1.9
2,890,671	-		CCNA_02727	0.67	+2.1
2,890,676	-		CCNA_02727	0.68	+5.0
2,890,701	+		CCNA_02727	0.71	-1.7
2,890,706	+		CCNA_02727	0.71	+2.7
2,890,709	-		CCNA_02727	0.72	-0.8
2,890,709	-		CCNA_02727	0.72	-1.0
2,890,709	-		CCNA_02727	0.72	-0.3
2,890,709	-		CCNA_02727	0.72	+0.1
2,890,714	-		CCNA_02727	0.72	+1.3
2,890,722	+		CCNA_02727	0.73	-2.8
2,890,724	+		CCNA_02727	0.74	-0.2
2,890,780	+		CCNA_02727	0.81	+0.6
2,890,788	-		CCNA_02727	0.82	+0.4
2,890,788	-		CCNA_02727	0.82	-1.2
2,890,788	-		CCNA_02727	0.82	+0.7
2,890,805	-		CCNA_02727	0.84	+2.7
2,890,848	+		CCNA_02727	0.89	+1.2
2,890,848	+		CCNA_02727	0.89	+1.4
2,890,848	+		CCNA_02727	0.89	+0.1
2,890,848	+		CCNA_02727	0.89	+1.3
2,890,856	-				+3.0
2,890,856	-				-1.9
2,890,913	+				-1.2
2,890,933	+				+0.6
2,890,967	+				-0.4
2,890,967	+				+1.0
2,890,967	+				-1.2
2,890,967	+				+1.3
2,890,972	+				+0.8
2,890,975	-				-2.0
2,890,975	-				+1.9
2,890,975	-				-0.5
2,890,975	-				+2.7
2,890,989	-				-2.1
2,890,991	-				+0.4
2,891,004	-				-2.6
2,891,073	+				+0.1
2,891,084	+				-0.9
2,891,088	-				+3.9
2,891,143	+		CCNA_02728	0.12	+1.3
2,891,143	+		CCNA_02728	0.12	+1.0
2,891,146	-		CCNA_02728	0.13	+0.0
2,891,148	+		CCNA_02728	0.13	+0.3
2,891,151	-		CCNA_02728	0.14	+1.7
2,891,166	+		CCNA_02728	0.19	+1.5
2,891,173	+		CCNA_02728	0.22	+1.0
2,891,196	+		CCNA_02728	0.29	+1.5
2,891,196	+		CCNA_02728	0.29	+1.6
2,891,196	+		CCNA_02728	0.29	+2.4
2,891,196	+		CCNA_02728	0.29	-1.2
2,891,196	+		CCNA_02728	0.29	+1.4
2,891,199	-		CCNA_02728	0.30	-2.6
2,891,204	-		CCNA_02728	0.32	+1.6
2,891,204	-		CCNA_02728	0.32	+2.1
2,891,204	-		CCNA_02728	0.32	-0.5
2,891,234	-		CCNA_02728	0.42	+0.1
2,891,274	+		CCNA_02728	0.55	+2.7
2,891,274	+		CCNA_02728	0.55	+1.6
2,891,305	+		CCNA_02728	0.65	+0.8
2,891,313	-		CCNA_02728	0.67	+1.7
2,891,313	-		CCNA_02728	0.67	-0.3
2,891,315	+		CCNA_02728	0.68	+1.1
2,891,315	+		CCNA_02728	0.68	+1.4
2,891,373	+		CCNA_02728	0.87	+1.5
2,891,382	+				+0.8
2,891,401	+				+1.8
2,891,464	+				-1.8
2,891,487	+				+2.2
2,891,495	-				-2.6
2,891,566	-				+1.4
2,891,578	-				+1.1
2,891,578	-				+0.7
2,891,580	+				+1.4
2,891,580	+				-1.2
2,891,597	+				+0.6
2,891,602	+				+0.6
2,891,602	+				+0.0
2,891,610	-				+1.1
2,891,624	+				-0.0
2,891,632	-				-1.0
2,891,638	-				+0.0
2,891,698	-				+0.4
2,891,717	+		CCNA_02729	0.10	+1.2
2,891,725	-		CCNA_02729	0.11	-1.2
2,891,761	-		CCNA_02729	0.13	-0.3
2,891,787	-		CCNA_02729	0.14	-1.3
2,891,812	-		CCNA_02729	0.15	-3.4
2,891,857	+		CCNA_02729	0.17	+0.1
2,891,857	+		CCNA_02729	0.17	-1.6
2,891,865	-		CCNA_02729	0.18	+0.1
2,891,870	-		CCNA_02729	0.18	+1.7
2,891,903	-		CCNA_02729	0.20	+2.8
2,891,905	+		CCNA_02729	0.20	+0.7