Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24875 and BWI76_RS24880 are separated by 13 nucleotides BWI76_RS24880 and BWI76_RS24885 are separated by 26 nucleotides BWI76_RS24885 and BWI76_RS24890 are separated by 5 nucleotides
BWI76_RS24875: BWI76_RS24875 - tagatose-1,6-bisphosphate aldolase, at 5,184,025 to 5,185,296
_RS24875
BWI76_RS24880: BWI76_RS24880 - PTS galactitol transporter subunit IIA, at 5,185,310 to 5,185,777
_RS24880
BWI76_RS24885: BWI76_RS24885 - PTS galactitol transporter subunit IIB, at 5,185,804 to 5,186,088
_RS24885
BWI76_RS24890: BWI76_RS24890 - PTS system galactitol-specific transporter subunit IIC, at 5,186,094 to 5,187,467
_RS24890
Position (kb) 5185
5186
5187 Strain fitness (log2 ratio) -2
-1
0
1 at 5184.871 kb on + strand, within BWI76_RS24875 at 5184.879 kb on - strand, within BWI76_RS24875 at 5184.879 kb on - strand, within BWI76_RS24875 at 5185.029 kb on - strand, within BWI76_RS24875 at 5185.049 kb on + strand, within BWI76_RS24875 at 5185.072 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.167 kb on + strand, within BWI76_RS24875 at 5185.175 kb on - strand at 5185.175 kb on - strand at 5185.175 kb on - strand at 5185.175 kb on - strand at 5185.242 kb on + strand at 5185.267 kb on + strand at 5185.437 kb on - strand, within BWI76_RS24880 at 5185.495 kb on + strand, within BWI76_RS24880 at 5185.495 kb on - strand, within BWI76_RS24880 at 5185.644 kb on - strand, within BWI76_RS24880 at 5185.837 kb on - strand, within BWI76_RS24885 at 5185.965 kb on - strand, within BWI76_RS24885 at 5185.991 kb on + strand, within BWI76_RS24885 at 5186.091 kb on + strand at 5186.200 kb on + strand at 5186.200 kb on + strand at 5186.349 kb on - strand, within BWI76_RS24890 at 5186.355 kb on + strand, within BWI76_RS24890 at 5186.496 kb on + strand, within BWI76_RS24890 at 5186.795 kb on - strand, within BWI76_RS24890 at 5186.815 kb on - strand, within BWI76_RS24890 at 5186.865 kb on - strand, within BWI76_RS24890
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,184,871 + BWI76_RS24875 0.67 +0.1 5,184,879 - BWI76_RS24875 0.67 +0.1 5,184,879 - BWI76_RS24875 0.67 -0.0 5,185,029 - BWI76_RS24875 0.79 -2.4 5,185,049 + BWI76_RS24875 0.81 -0.4 5,185,072 + BWI76_RS24875 0.82 -0.8 5,185,167 + BWI76_RS24875 0.90 +1.0 5,185,167 + BWI76_RS24875 0.90 +0.5 5,185,167 + BWI76_RS24875 0.90 -0.4 5,185,167 + BWI76_RS24875 0.90 +0.2 5,185,175 - -0.1 5,185,175 - -0.3 5,185,175 - -0.6 5,185,175 - +0.3 5,185,242 + +0.0 5,185,267 + +0.8 5,185,437 - BWI76_RS24880 0.27 +0.2 5,185,495 + BWI76_RS24880 0.40 +0.2 5,185,495 - BWI76_RS24880 0.40 -1.1 5,185,644 - BWI76_RS24880 0.71 -0.4 5,185,837 - BWI76_RS24885 0.12 +1.2 5,185,965 - BWI76_RS24885 0.56 -0.3 5,185,991 + BWI76_RS24885 0.66 +1.3 5,186,091 + -0.5 5,186,200 + +0.2 5,186,200 + -0.5 5,186,349 - BWI76_RS24890 0.19 -0.2 5,186,355 + BWI76_RS24890 0.19 +0.5 5,186,496 + BWI76_RS24890 0.29 +0.0 5,186,795 - BWI76_RS24890 0.51 +0.9 5,186,815 - BWI76_RS24890 0.52 +0.2 5,186,865 - BWI76_RS24890 0.56 -0.3
Or see this region's nucleotide sequence