Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23310 and BWI76_RS23315 overlap by 8 nucleotides BWI76_RS23315 and BWI76_RS23320 are separated by 23 nucleotides BWI76_RS23320 and BWI76_RS23325 are separated by 19 nucleotides BWI76_RS23325 and BWI76_RS23330 are separated by 94 nucleotides
BWI76_RS23310: BWI76_RS23310 - lysophospholipid transporter LplT, at 4,860,872 to 4,862,065
_RS23310
BWI76_RS23315: BWI76_RS23315 - acyl-[ACP]--phospholipid O-acyltransferase, at 4,862,058 to 4,864,217
_RS23315
BWI76_RS23320: BWI76_RS23320 - hypothetical protein, at 4,864,241 to 4,864,432
_RS23320
BWI76_RS23325: BWI76_RS23325 - hypothetical protein, at 4,864,452 to 4,864,745
_RS23325
BWI76_RS23330: BWI76_RS23330 - transcriptional regulator GalR, at 4,864,840 to 4,865,856
_RS23330
Position (kb) 4862
4863
4864
4865 Strain fitness (log2 ratio) -2
-1
0
1 at 4861.061 kb on - strand, within BWI76_RS23310 at 4861.395 kb on - strand, within BWI76_RS23310 at 4861.515 kb on + strand, within BWI76_RS23310 at 4861.614 kb on - strand, within BWI76_RS23310 at 4861.778 kb on + strand, within BWI76_RS23310 at 4861.806 kb on - strand, within BWI76_RS23310 at 4862.132 kb on - strand at 4862.147 kb on - strand at 4862.682 kb on + strand, within BWI76_RS23315 at 4862.897 kb on + strand, within BWI76_RS23315 at 4862.915 kb on + strand, within BWI76_RS23315 at 4862.957 kb on + strand, within BWI76_RS23315 at 4863.068 kb on - strand, within BWI76_RS23315 at 4863.333 kb on + strand, within BWI76_RS23315 at 4863.340 kb on + strand, within BWI76_RS23315 at 4863.340 kb on + strand, within BWI76_RS23315 at 4863.341 kb on - strand, within BWI76_RS23315 at 4863.341 kb on - strand, within BWI76_RS23315 at 4863.355 kb on + strand, within BWI76_RS23315 at 4863.667 kb on + strand, within BWI76_RS23315 at 4863.927 kb on + strand, within BWI76_RS23315 at 4864.174 kb on - strand at 4864.174 kb on - strand at 4864.313 kb on - strand, within BWI76_RS23320 at 4864.485 kb on + strand, within BWI76_RS23325 at 4864.485 kb on + strand, within BWI76_RS23325 at 4864.495 kb on + strand, within BWI76_RS23325 at 4864.529 kb on + strand, within BWI76_RS23325 at 4864.729 kb on + strand at 4864.737 kb on - strand at 4864.753 kb on - strand at 4865.021 kb on + strand, within BWI76_RS23330 at 4865.038 kb on + strand, within BWI76_RS23330 at 4865.092 kb on + strand, within BWI76_RS23330
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,861,061 - BWI76_RS23310 0.16 -0.4 4,861,395 - BWI76_RS23310 0.44 -0.4 4,861,515 + BWI76_RS23310 0.54 +0.2 4,861,614 - BWI76_RS23310 0.62 +0.6 4,861,778 + BWI76_RS23310 0.76 -0.1 4,861,806 - BWI76_RS23310 0.78 -0.3 4,862,132 - +1.5 4,862,147 - -0.4 4,862,682 + BWI76_RS23315 0.29 +0.3 4,862,897 + BWI76_RS23315 0.39 +0.1 4,862,915 + BWI76_RS23315 0.40 -0.5 4,862,957 + BWI76_RS23315 0.42 +0.4 4,863,068 - BWI76_RS23315 0.47 +1.2 4,863,333 + BWI76_RS23315 0.59 +0.6 4,863,340 + BWI76_RS23315 0.59 +0.5 4,863,340 + BWI76_RS23315 0.59 -0.7 4,863,341 - BWI76_RS23315 0.59 -0.5 4,863,341 - BWI76_RS23315 0.59 +0.5 4,863,355 + BWI76_RS23315 0.60 -0.7 4,863,667 + BWI76_RS23315 0.74 -0.7 4,863,927 + BWI76_RS23315 0.87 +1.3 4,864,174 - +0.7 4,864,174 - -0.5 4,864,313 - BWI76_RS23320 0.38 +0.7 4,864,485 + BWI76_RS23325 0.11 -1.8 4,864,485 + BWI76_RS23325 0.11 +0.1 4,864,495 + BWI76_RS23325 0.15 +0.3 4,864,529 + BWI76_RS23325 0.26 -0.2 4,864,729 + -0.0 4,864,737 - -0.6 4,864,753 - -0.1 4,865,021 + BWI76_RS23330 0.18 +0.3 4,865,038 + BWI76_RS23330 0.19 +1.0 4,865,092 + BWI76_RS23330 0.25 +0.2
Or see this region's nucleotide sequence