Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19965 and BWI76_RS19970 overlap by 11 nucleotides BWI76_RS19970 and BWI76_RS19975 overlap by 4 nucleotides
BWI76_RS19965: BWI76_RS19965 - sn-glycerol-3-phosphate dehydrogenase subunit A, at 4,181,729 to 4,183,351
_RS19965
BWI76_RS19970: BWI76_RS19970 - anaerobic glycerol-3-phosphate dehydrogenase subunit B, at 4,183,341 to 4,184,600
_RS19970
BWI76_RS19975: BWI76_RS19975 - sn-glycerol-3-phosphate dehydrogenase subunit C, at 4,184,597 to 4,185,776
_RS19975
Position (kb)
4183
4184
4185 Strain fitness (log2 ratio)
-1
0
1 at 4182.391 kb on - strand, within BWI76_RS19965 at 4183.052 kb on + strand, within BWI76_RS19965 at 4183.305 kb on + strand at 4183.393 kb on + strand at 4183.402 kb on - strand at 4183.647 kb on - strand, within BWI76_RS19970 at 4183.655 kb on + strand, within BWI76_RS19970 at 4184.257 kb on + strand, within BWI76_RS19970 at 4184.594 kb on + strand at 4184.825 kb on - strand, within BWI76_RS19975 at 4185.312 kb on + strand, within BWI76_RS19975 at 4185.313 kb on - strand at 4185.319 kb on + strand, within BWI76_RS19975 at 4185.319 kb on + strand, within BWI76_RS19975 at 4185.327 kb on - strand at 4185.327 kb on - strand, within BWI76_RS19975 at 4185.327 kb on - strand, within BWI76_RS19975 at 4185.327 kb on - strand, within BWI76_RS19975 at 4185.522 kb on - strand, within BWI76_RS19975
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,182,391 - BWI76_RS19965 0.41 -0.5 4,183,052 + BWI76_RS19965 0.82 +0.3 4,183,305 + -0.7 4,183,393 + -0.1 4,183,402 - -0.8 4,183,647 - BWI76_RS19970 0.24 +0.8 4,183,655 + BWI76_RS19970 0.25 +0.5 4,184,257 + BWI76_RS19970 0.73 -0.2 4,184,594 + +0.6 4,184,825 - BWI76_RS19975 0.19 +0.0 4,185,312 + BWI76_RS19975 0.61 -0.7 4,185,313 - +0.0 4,185,319 + BWI76_RS19975 0.61 -0.3 4,185,319 + BWI76_RS19975 0.61 +0.8 4,185,327 - +0.4 4,185,327 - BWI76_RS19975 0.62 -1.0 4,185,327 - BWI76_RS19975 0.62 +1.2 4,185,327 - BWI76_RS19975 0.62 +0.8 4,185,522 - BWI76_RS19975 0.78 -0.3
Or see this region's nucleotide sequence