Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12715

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS12710 and BWI76_RS12715 are separated by 193 nucleotidesBWI76_RS12715 and BWI76_RS12720 are separated by 82 nucleotidesBWI76_RS12720 and BWI76_RS12725 are separated by 154 nucleotides BWI76_RS12710: BWI76_RS12710 - tRNA 2-thiocytidine(32) synthetase TtcA, at 2,649,641 to 2,650,576 _RS12710 BWI76_RS12715: BWI76_RS12715 - universal stress protein F, at 2,650,770 to 2,651,204 _RS12715 BWI76_RS12720: BWI76_RS12720 - KTSC domain-containing protein, at 2,651,287 to 2,651,499 _RS12720 BWI76_RS12725: BWI76_RS12725 - outer membrane pore protein N, non-specific, at 2,651,654 to 2,652,802 _RS12725 Position (kb) 2650 2651 2652Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2649.825 kb on - strand, within BWI76_RS12710at 2649.843 kb on + strand, within BWI76_RS12710at 2649.878 kb on - strand, within BWI76_RS12710at 2649.944 kb on - strand, within BWI76_RS12710at 2650.099 kb on + strand, within BWI76_RS12710at 2650.159 kb on + strand, within BWI76_RS12710at 2650.198 kb on - strand, within BWI76_RS12710at 2650.426 kb on + strand, within BWI76_RS12710at 2650.673 kb on - strandat 2650.765 kb on - strandat 2650.843 kb on - strand, within BWI76_RS12715at 2651.016 kb on - strand, within BWI76_RS12715at 2651.016 kb on - strand, within BWI76_RS12715at 2651.041 kb on + strand, within BWI76_RS12715at 2651.041 kb on + strand, within BWI76_RS12715at 2651.041 kb on + strand, within BWI76_RS12715at 2651.049 kb on - strand, within BWI76_RS12715at 2651.062 kb on + strand, within BWI76_RS12715at 2651.388 kb on + strand, within BWI76_RS12720at 2651.390 kb on + strand, within BWI76_RS12720at 2651.390 kb on + strand, within BWI76_RS12720at 2651.398 kb on - strand, within BWI76_RS12720at 2651.398 kb on - strand, within BWI76_RS12720at 2651.403 kb on + strand, within BWI76_RS12720at 2651.405 kb on - strand, within BWI76_RS12720at 2651.445 kb on + strand, within BWI76_RS12720at 2651.480 kb on + strandat 2651.488 kb on - strandat 2651.494 kb on + strandat 2651.504 kb on + strandat 2651.527 kb on + strandat 2651.535 kb on - strandat 2651.545 kb on - strandat 2651.634 kb on + strandat 2651.639 kb on - strandat 2651.652 kb on + strandat 2651.652 kb on + strandat 2651.652 kb on + strandat 2651.652 kb on + strandat 2651.652 kb on + strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.660 kb on - strandat 2651.679 kb on - strandat 2651.727 kb on + strandat 2651.730 kb on + strandat 2651.748 kb on - strandat 2651.752 kb on + strandat 2651.770 kb on - strand, within BWI76_RS12725at 2651.776 kb on - strand, within BWI76_RS12725at 2651.791 kb on - strand, within BWI76_RS12725at 2651.845 kb on + strand, within BWI76_RS12725at 2651.853 kb on + strand, within BWI76_RS12725at 2651.853 kb on - strand, within BWI76_RS12725at 2651.858 kb on + strand, within BWI76_RS12725at 2651.858 kb on + strand, within BWI76_RS12725at 2651.858 kb on + strand, within BWI76_RS12725at 2651.858 kb on + strand, within BWI76_RS12725at 2651.858 kb on + strand, within BWI76_RS12725at 2651.861 kb on - strand, within BWI76_RS12725at 2651.868 kb on + strand, within BWI76_RS12725at 2651.868 kb on + strand, within BWI76_RS12725at 2651.868 kb on + strandat 2651.868 kb on + strand, within BWI76_RS12725at 2651.868 kb on + strand, within BWI76_RS12725at 2651.868 kb on + strand, within BWI76_RS12725at 2651.868 kb on + strand, within BWI76_RS12725at 2651.868 kb on + strand, within BWI76_RS12725at 2651.874 kb on + strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strandat 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.876 kb on - strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strandat 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.880 kb on + strand, within BWI76_RS12725at 2651.882 kb on - strand, within BWI76_RS12725at 2651.888 kb on + strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.888 kb on - strand, within BWI76_RS12725at 2651.890 kb on + strand, within BWI76_RS12725at 2651.893 kb on + strand, within BWI76_RS12725at 2651.893 kb on + strand, within BWI76_RS12725at 2651.897 kb on + strand, within BWI76_RS12725at 2651.897 kb on + strand, within BWI76_RS12725at 2651.898 kb on - strand, within BWI76_RS12725at 2651.904 kb on + strand, within BWI76_RS12725at 2651.904 kb on + strand, within BWI76_RS12725at 2651.904 kb on + strand, within BWI76_RS12725at 2651.919 kb on + strand, within BWI76_RS12725at 2651.922 kb on - strand, within BWI76_RS12725at 2651.930 kb on + strand, within BWI76_RS12725at 2651.937 kb on - strand, within BWI76_RS12725at 2651.989 kb on - strand, within BWI76_RS12725at 2652.039 kb on - strand, within BWI76_RS12725at 2652.053 kb on + strand, within BWI76_RS12725at 2652.071 kb on + strand, within BWI76_RS12725at 2652.071 kb on + strand, within BWI76_RS12725at 2652.071 kb on + strand, within BWI76_RS12725at 2652.152 kb on + strand, within BWI76_RS12725at 2652.152 kb on + strand, within BWI76_RS12725at 2652.152 kb on + strand, within BWI76_RS12725at 2652.152 kb on + strand, within BWI76_RS12725at 2652.159 kb on + strand, within BWI76_RS12725at 2652.159 kb on + strand, within BWI76_RS12725at 2652.159 kb on + strand, within BWI76_RS12725at 2652.160 kb on - strand, within BWI76_RS12725at 2652.160 kb on - strand, within BWI76_RS12725at 2652.163 kb on + strand, within BWI76_RS12725at 2652.167 kb on - strand, within BWI76_RS12725at 2652.177 kb on + strand, within BWI76_RS12725at 2652.177 kb on + strand, within BWI76_RS12725at 2652.182 kb on + strand, within BWI76_RS12725at 2652.187 kb on + strand, within BWI76_RS12725

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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2,649,825 - BWI76_RS12710 0.20 +0.3
2,649,843 + BWI76_RS12710 0.22 -1.2
2,649,878 - BWI76_RS12710 0.25 +0.2
2,649,944 - BWI76_RS12710 0.32 -0.5
2,650,099 + BWI76_RS12710 0.49 +0.6
2,650,159 + BWI76_RS12710 0.55 +0.3
2,650,198 - BWI76_RS12710 0.60 +1.2
2,650,426 + BWI76_RS12710 0.84 -0.3
2,650,673 - -0.2
2,650,765 - -0.4
2,650,843 - BWI76_RS12715 0.17 +0.3
2,651,016 - BWI76_RS12715 0.57 +0.5
2,651,016 - BWI76_RS12715 0.57 +0.1
2,651,041 + BWI76_RS12715 0.62 +0.1
2,651,041 + BWI76_RS12715 0.62 +1.5
2,651,041 + BWI76_RS12715 0.62 -0.2
2,651,049 - BWI76_RS12715 0.64 +1.0
2,651,062 + BWI76_RS12715 0.67 +0.4
2,651,388 + BWI76_RS12720 0.47 +0.5
2,651,390 + BWI76_RS12720 0.48 +0.7
2,651,390 + BWI76_RS12720 0.48 +0.4
2,651,398 - BWI76_RS12720 0.52 -0.2
2,651,398 - BWI76_RS12720 0.52 +0.6
2,651,403 + BWI76_RS12720 0.54 +1.0
2,651,405 - BWI76_RS12720 0.55 +0.1
2,651,445 + BWI76_RS12720 0.74 -0.8
2,651,480 + +0.1
2,651,488 - -1.0
2,651,494 + +0.5
2,651,504 + -0.5
2,651,527 + -1.3
2,651,535 - -0.1
2,651,545 - -0.0
2,651,634 + -0.2
2,651,639 - -0.5
2,651,652 + +0.1
2,651,652 + -0.3
2,651,652 + +0.7
2,651,652 + +1.0
2,651,652 + +1.0
2,651,660 - -0.1
2,651,660 - -0.2
2,651,660 - -0.3
2,651,660 - -2.3
2,651,660 - -1.7
2,651,660 - -0.2
2,651,660 - -0.1
2,651,660 - -0.1
2,651,660 - +0.3
2,651,660 - +0.6
2,651,679 - -0.3
2,651,727 + -0.2
2,651,730 + +0.8
2,651,748 - -0.5
2,651,752 + -0.8
2,651,770 - BWI76_RS12725 0.10 +1.1
2,651,776 - BWI76_RS12725 0.11 -0.2
2,651,791 - BWI76_RS12725 0.12 +0.5
2,651,845 + BWI76_RS12725 0.17 -0.7
2,651,853 + BWI76_RS12725 0.17 -0.6
2,651,853 - BWI76_RS12725 0.17 +0.2
2,651,858 + BWI76_RS12725 0.18 -1.8
2,651,858 + BWI76_RS12725 0.18 -0.5
2,651,858 + BWI76_RS12725 0.18 -0.1
2,651,858 + BWI76_RS12725 0.18 +1.4
2,651,858 + BWI76_RS12725 0.18 +0.0
2,651,861 - BWI76_RS12725 0.18 +1.1
2,651,868 + BWI76_RS12725 0.19 +0.5
2,651,868 + BWI76_RS12725 0.19 -0.3
2,651,868 + -0.8
2,651,868 + BWI76_RS12725 0.19 -0.5
2,651,868 + BWI76_RS12725 0.19 +1.2
2,651,868 + BWI76_RS12725 0.19 -1.8
2,651,868 + BWI76_RS12725 0.19 -1.4
2,651,868 + BWI76_RS12725 0.19 -0.6
2,651,874 + BWI76_RS12725 0.19 +1.1
2,651,876 - BWI76_RS12725 0.19 -0.2
2,651,876 - BWI76_RS12725 0.19 +0.6
2,651,876 - BWI76_RS12725 0.19 +0.7
2,651,876 - BWI76_RS12725 0.19 -0.4
2,651,876 - +0.8
2,651,876 - BWI76_RS12725 0.19 +0.7
2,651,876 - BWI76_RS12725 0.19 +1.9
2,651,876 - BWI76_RS12725 0.19 -0.2
2,651,876 - BWI76_RS12725 0.19 -1.3
2,651,876 - BWI76_RS12725 0.19 -0.4
2,651,876 - BWI76_RS12725 0.19 +0.3
2,651,876 - BWI76_RS12725 0.19 -0.4
2,651,880 + BWI76_RS12725 0.20 -1.1
2,651,880 + BWI76_RS12725 0.20 +0.2
2,651,880 + BWI76_RS12725 0.20 +1.1
2,651,880 + BWI76_RS12725 0.20 +0.3
2,651,880 + +1.2
2,651,880 + BWI76_RS12725 0.20 -0.8
2,651,880 + BWI76_RS12725 0.20 +2.1
2,651,880 + BWI76_RS12725 0.20 +1.1
2,651,880 + BWI76_RS12725 0.20 +0.0
2,651,880 + BWI76_RS12725 0.20 +0.7
2,651,880 + BWI76_RS12725 0.20 +0.0
2,651,880 + BWI76_RS12725 0.20 +0.1
2,651,880 + BWI76_RS12725 0.20 -0.6
2,651,880 + BWI76_RS12725 0.20 +0.7
2,651,880 + BWI76_RS12725 0.20 +0.5
2,651,880 + BWI76_RS12725 0.20 -0.9
2,651,880 + BWI76_RS12725 0.20 +0.3
2,651,880 + BWI76_RS12725 0.20 -0.3
2,651,880 + BWI76_RS12725 0.20 +0.5
2,651,880 + BWI76_RS12725 0.20 +0.9
2,651,880 + BWI76_RS12725 0.20 +0.3
2,651,880 + BWI76_RS12725 0.20 -1.0
2,651,880 + BWI76_RS12725 0.20 +2.4
2,651,880 + BWI76_RS12725 0.20 +1.0
2,651,882 - BWI76_RS12725 0.20 +0.0
2,651,888 + BWI76_RS12725 0.20 -1.2
2,651,888 - BWI76_RS12725 0.20 -0.3
2,651,888 - BWI76_RS12725 0.20 +0.5
2,651,888 - BWI76_RS12725 0.20 +0.6
2,651,888 - BWI76_RS12725 0.20 -0.0
2,651,888 - BWI76_RS12725 0.20 +0.6
2,651,888 - BWI76_RS12725 0.20 +0.3
2,651,888 - BWI76_RS12725 0.20 -0.1
2,651,888 - BWI76_RS12725 0.20 -1.6
2,651,888 - BWI76_RS12725 0.20 +0.2
2,651,888 - BWI76_RS12725 0.20 -0.0
2,651,888 - BWI76_RS12725 0.20 +1.0
2,651,888 - BWI76_RS12725 0.20 +0.5
2,651,888 - BWI76_RS12725 0.20 +0.4
2,651,888 - BWI76_RS12725 0.20 +0.5
2,651,888 - BWI76_RS12725 0.20 +0.4
2,651,888 - BWI76_RS12725 0.20 -0.1
2,651,888 - BWI76_RS12725 0.20 +0.2
2,651,888 - BWI76_RS12725 0.20 -0.7
2,651,888 - BWI76_RS12725 0.20 +0.2
2,651,888 - BWI76_RS12725 0.20 -1.2
2,651,890 + BWI76_RS12725 0.21 -0.5
2,651,893 + BWI76_RS12725 0.21 +0.7
2,651,893 + BWI76_RS12725 0.21 +0.2
2,651,897 + BWI76_RS12725 0.21 -0.2
2,651,897 + BWI76_RS12725 0.21 +1.2
2,651,898 - BWI76_RS12725 0.21 -0.5
2,651,904 + BWI76_RS12725 0.22 -0.0
2,651,904 + BWI76_RS12725 0.22 +0.4
2,651,904 + BWI76_RS12725 0.22 +0.1
2,651,919 + BWI76_RS12725 0.23 +0.8
2,651,922 - BWI76_RS12725 0.23 -0.5
2,651,930 + BWI76_RS12725 0.24 +1.0
2,651,937 - BWI76_RS12725 0.25 -0.9
2,651,989 - BWI76_RS12725 0.29 +0.6
2,652,039 - BWI76_RS12725 0.34 +0.2
2,652,053 + BWI76_RS12725 0.35 -0.2
2,652,071 + BWI76_RS12725 0.36 -1.2
2,652,071 + BWI76_RS12725 0.36 +0.3
2,652,071 + BWI76_RS12725 0.36 -0.7
2,652,152 + BWI76_RS12725 0.43 +0.4
2,652,152 + BWI76_RS12725 0.43 +0.4
2,652,152 + BWI76_RS12725 0.43 -0.3
2,652,152 + BWI76_RS12725 0.43 -0.3
2,652,159 + BWI76_RS12725 0.44 -0.6
2,652,159 + BWI76_RS12725 0.44 +0.0
2,652,159 + BWI76_RS12725 0.44 -0.2
2,652,160 - BWI76_RS12725 0.44 +0.3
2,652,160 - BWI76_RS12725 0.44 -2.8
2,652,163 + BWI76_RS12725 0.44 +2.8
2,652,167 - BWI76_RS12725 0.45 -0.7
2,652,177 + BWI76_RS12725 0.46 -0.4
2,652,177 + BWI76_RS12725 0.46 -0.3
2,652,182 + BWI76_RS12725 0.46 +1.0
2,652,187 + BWI76_RS12725 0.46 +0.0

Or see this region's nucleotide sequence