Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10840 and BWI76_RS10845 are separated by 122 nucleotides BWI76_RS10845 and BWI76_RS10850 overlap by 4 nucleotides BWI76_RS10850 and BWI76_RS10855 are separated by 78 nucleotides
BWI76_RS10840: BWI76_RS10840 - membrane protein, at 2,290,506 to 2,291,294
_RS10840
BWI76_RS10845: BWI76_RS10845 - DNA-binding response regulator, at 2,291,417 to 2,292,112
_RS10845
BWI76_RS10850: BWI76_RS10850 - two-component sensor histidine kinase, at 2,292,109 to 2,293,305
_RS10850
BWI76_RS10855: BWI76_RS10855 - RND family efflux transporter MFP subunit, at 2,293,384 to 2,294,532
_RS10855
Position (kb)
2292
2293
2294 Strain fitness (log2 ratio)
-2
-1
0
1 at 2291.271 kb on - strand at 2291.536 kb on + strand, within BWI76_RS10845 at 2291.544 kb on - strand, within BWI76_RS10845 at 2291.617 kb on - strand, within BWI76_RS10845 at 2291.719 kb on + strand, within BWI76_RS10845 at 2291.720 kb on + strand, within BWI76_RS10845 at 2292.001 kb on - strand, within BWI76_RS10845 at 2292.097 kb on - strand at 2292.325 kb on + strand, within BWI76_RS10850 at 2292.438 kb on + strand, within BWI76_RS10850 at 2292.729 kb on + strand, within BWI76_RS10850 at 2292.958 kb on + strand, within BWI76_RS10850 at 2293.394 kb on + strand at 2293.427 kb on - strand at 2293.486 kb on + strand at 2293.656 kb on + strand, within BWI76_RS10855 at 2294.037 kb on - strand, within BWI76_RS10855
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,291,271 - +0.1 2,291,536 + BWI76_RS10845 0.17 -0.0 2,291,544 - BWI76_RS10845 0.18 +0.4 2,291,617 - BWI76_RS10845 0.29 +0.3 2,291,719 + BWI76_RS10845 0.43 -0.3 2,291,720 + BWI76_RS10845 0.44 -1.1 2,292,001 - BWI76_RS10845 0.84 -2.0 2,292,097 - +0.5 2,292,325 + BWI76_RS10850 0.18 +0.1 2,292,438 + BWI76_RS10850 0.27 -0.8 2,292,729 + BWI76_RS10850 0.52 -2.1 2,292,958 + BWI76_RS10850 0.71 -0.4 2,293,394 + -1.2 2,293,427 - -0.3 2,293,486 + -0.1 2,293,656 + BWI76_RS10855 0.24 +0.2 2,294,037 - BWI76_RS10855 0.57 -0.1
Or see this region's nucleotide sequence