Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07215 and BWI76_RS07220 are separated by 162 nucleotides BWI76_RS07220 and BWI76_RS07225 are separated by 39 nucleotides
BWI76_RS07215: BWI76_RS07215 - class A extended-spectrum beta-lactamase OXY-6-4, at 1,517,815 to 1,518,690
_RS07215
BWI76_RS07220: BWI76_RS07220 - oxidoreductase NAD-binding protein, at 1,518,853 to 1,519,884
_RS07220
BWI76_RS07225: BWI76_RS07225 - putative oxidoreductase, at 1,519,924 to 1,520,931
_RS07225
Position (kb)
1518
1519
1520 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1517.886 kb on - strand at 1517.889 kb on + strand at 1518.009 kb on + strand, within BWI76_RS07215 at 1518.148 kb on - strand, within BWI76_RS07215 at 1518.170 kb on - strand, within BWI76_RS07215 at 1518.172 kb on + strand, within BWI76_RS07215 at 1518.172 kb on + strand, within BWI76_RS07215 at 1518.220 kb on + strand, within BWI76_RS07215 at 1518.223 kb on - strand, within BWI76_RS07215 at 1518.225 kb on + strand, within BWI76_RS07215 at 1518.316 kb on + strand, within BWI76_RS07215 at 1518.319 kb on - strand, within BWI76_RS07215 at 1518.335 kb on - strand, within BWI76_RS07215 at 1518.444 kb on - strand, within BWI76_RS07215 at 1518.478 kb on - strand, within BWI76_RS07215 at 1518.532 kb on + strand, within BWI76_RS07215 at 1518.535 kb on - strand, within BWI76_RS07215 at 1518.535 kb on - strand, within BWI76_RS07215 at 1518.540 kb on - strand, within BWI76_RS07215 at 1518.597 kb on + strand at 1518.688 kb on - strand at 1518.697 kb on + strand at 1518.898 kb on + strand at 1518.943 kb on + strand at 1518.985 kb on - strand, within BWI76_RS07220 at 1519.007 kb on - strand, within BWI76_RS07220 at 1519.056 kb on + strand, within BWI76_RS07220 at 1519.206 kb on + strand, within BWI76_RS07220 at 1519.337 kb on - strand, within BWI76_RS07220 at 1519.443 kb on - strand, within BWI76_RS07220 at 1519.466 kb on - strand, within BWI76_RS07220 at 1519.566 kb on + strand, within BWI76_RS07220 at 1519.901 kb on - strand at 1519.990 kb on + strand at 1520.042 kb on - strand, within BWI76_RS07225 at 1520.222 kb on + strand, within BWI76_RS07225 at 1520.230 kb on - strand, within BWI76_RS07225 at 1520.485 kb on - strand, within BWI76_RS07225
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,517,886 - +0.5 1,517,889 + -0.4 1,518,009 + BWI76_RS07215 0.22 +0.6 1,518,148 - BWI76_RS07215 0.38 -0.2 1,518,170 - BWI76_RS07215 0.41 +0.2 1,518,172 + BWI76_RS07215 0.41 -0.8 1,518,172 + BWI76_RS07215 0.41 -0.6 1,518,220 + BWI76_RS07215 0.46 +0.3 1,518,223 - BWI76_RS07215 0.47 -0.1 1,518,225 + BWI76_RS07215 0.47 -0.5 1,518,316 + BWI76_RS07215 0.57 +0.1 1,518,319 - BWI76_RS07215 0.58 +0.0 1,518,335 - BWI76_RS07215 0.59 +0.5 1,518,444 - BWI76_RS07215 0.72 -0.3 1,518,478 - BWI76_RS07215 0.76 +0.4 1,518,532 + BWI76_RS07215 0.82 +0.5 1,518,535 - BWI76_RS07215 0.82 -0.1 1,518,535 - BWI76_RS07215 0.82 -1.3 1,518,540 - BWI76_RS07215 0.83 +0.2 1,518,597 + +2.0 1,518,688 - -0.4 1,518,697 + +0.7 1,518,898 + +0.1 1,518,943 + +0.1 1,518,985 - BWI76_RS07220 0.13 -0.5 1,519,007 - BWI76_RS07220 0.15 +0.1 1,519,056 + BWI76_RS07220 0.20 -1.4 1,519,206 + BWI76_RS07220 0.34 -1.0 1,519,337 - BWI76_RS07220 0.47 -2.0 1,519,443 - BWI76_RS07220 0.57 -0.1 1,519,466 - BWI76_RS07220 0.59 -0.9 1,519,566 + BWI76_RS07220 0.69 +0.0 1,519,901 - +0.3 1,519,990 + -1.5 1,520,042 - BWI76_RS07225 0.12 -0.4 1,520,222 + BWI76_RS07225 0.30 -0.2 1,520,230 - BWI76_RS07225 0.30 +0.9 1,520,485 - BWI76_RS07225 0.56 -0.2
Or see this region's nucleotide sequence