Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06890 and BWI76_RS06895 are separated by 19 nucleotides BWI76_RS06895 and BWI76_RS06900 overlap by 8 nucleotides BWI76_RS06900 and BWI76_RS06905 are separated by 74 nucleotides
BWI76_RS06890: BWI76_RS06890 - TonB-dependent receptor, at 1,446,341 to 1,448,581
_RS06890
BWI76_RS06895: BWI76_RS06895 - biopolymer transporter ExbB, at 1,448,601 to 1,449,248
_RS06895
BWI76_RS06900: BWI76_RS06900 - phospholipase D, at 1,449,241 to 1,450,491
_RS06900
BWI76_RS06905: BWI76_RS06905 - Cu+ exporting ATPase, at 1,450,566 to 1,453,067
_RS06905
Position (kb)
1449
1450
1451 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1448.512 kb on + strand at 1448.512 kb on + strand at 1448.520 kb on - strand at 1448.532 kb on - strand at 1448.550 kb on + strand at 1448.550 kb on + strand at 1448.558 kb on - strand at 1448.794 kb on + strand, within BWI76_RS06895 at 1448.841 kb on + strand, within BWI76_RS06895 at 1448.916 kb on - strand, within BWI76_RS06895 at 1449.106 kb on - strand, within BWI76_RS06895 at 1449.170 kb on - strand, within BWI76_RS06895 at 1449.319 kb on - strand at 1449.363 kb on + strand at 1449.368 kb on - strand, within BWI76_RS06900 at 1449.401 kb on - strand, within BWI76_RS06900 at 1449.450 kb on + strand, within BWI76_RS06900 at 1449.655 kb on + strand, within BWI76_RS06900 at 1449.701 kb on - strand, within BWI76_RS06900 at 1449.796 kb on + strand, within BWI76_RS06900 at 1449.943 kb on - strand, within BWI76_RS06900 at 1449.982 kb on + strand, within BWI76_RS06900 at 1450.018 kb on + strand, within BWI76_RS06900 at 1450.258 kb on + strand, within BWI76_RS06900 at 1450.410 kb on + strand at 1450.560 kb on - strand at 1450.563 kb on + strand at 1450.563 kb on + strand at 1450.585 kb on - strand at 1450.602 kb on - strand at 1450.817 kb on + strand, within BWI76_RS06905 at 1450.974 kb on - strand, within BWI76_RS06905 at 1451.369 kb on - strand, within BWI76_RS06905
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,448,512 + +0.1 1,448,512 + +0.2 1,448,520 - -0.4 1,448,532 - -0.6 1,448,550 + -0.5 1,448,550 + +0.2 1,448,558 - -1.1 1,448,794 + BWI76_RS06895 0.30 +0.3 1,448,841 + BWI76_RS06895 0.37 +0.2 1,448,916 - BWI76_RS06895 0.49 +0.7 1,449,106 - BWI76_RS06895 0.78 -2.9 1,449,170 - BWI76_RS06895 0.88 +0.3 1,449,319 - +2.0 1,449,363 + +0.3 1,449,368 - BWI76_RS06900 0.10 +0.6 1,449,401 - BWI76_RS06900 0.13 +0.8 1,449,450 + BWI76_RS06900 0.17 +0.3 1,449,655 + BWI76_RS06900 0.33 +0.6 1,449,701 - BWI76_RS06900 0.37 +0.4 1,449,796 + BWI76_RS06900 0.44 -0.7 1,449,943 - BWI76_RS06900 0.56 +0.6 1,449,982 + BWI76_RS06900 0.59 +1.7 1,450,018 + BWI76_RS06900 0.62 +0.4 1,450,258 + BWI76_RS06900 0.81 -0.0 1,450,410 + +0.3 1,450,560 - +0.3 1,450,563 + +0.2 1,450,563 + +0.0 1,450,585 - +1.3 1,450,602 - +0.2 1,450,817 + BWI76_RS06905 0.10 -1.5 1,450,974 - BWI76_RS06905 0.16 -0.9 1,451,369 - BWI76_RS06905 0.32 +0.4
Or see this region's nucleotide sequence