Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02650 and BWI76_RS02655 are separated by 138 nucleotides BWI76_RS02655 and BWI76_RS02660 are separated by 337 nucleotides BWI76_RS02660 and BWI76_RS02665 are separated by 5 nucleotides
BWI76_RS02650: BWI76_RS02650 - MFS transporter, at 540,528 to 541,721
_RS02650
BWI76_RS02655: BWI76_RS02655 - hypothetical protein, at 541,860 to 542,135
_RS02655
BWI76_RS02660: BWI76_RS02660 - 30S ribosomal protein S6, at 542,473 to 542,868
_RS02660
BWI76_RS02665: BWI76_RS02665 - primosomal replication protein N, at 542,874 to 543,188
_RS02665
Position (kb) 541
542
543 Strain fitness (log2 ratio) -2
-1
0
1
2 at 540.892 kb on - strand, within BWI76_RS02650 at 540.892 kb on - strand, within BWI76_RS02650 at 541.050 kb on + strand, within BWI76_RS02650 at 541.079 kb on + strand, within BWI76_RS02650 at 541.106 kb on - strand, within BWI76_RS02650 at 541.113 kb on - strand, within BWI76_RS02650 at 541.115 kb on + strand, within BWI76_RS02650 at 541.178 kb on + strand, within BWI76_RS02650 at 541.351 kb on - strand, within BWI76_RS02650 at 541.457 kb on + strand, within BWI76_RS02650 at 541.457 kb on + strand, within BWI76_RS02650 at 541.457 kb on + strand at 541.465 kb on - strand, within BWI76_RS02650 at 541.465 kb on - strand, within BWI76_RS02650 at 541.465 kb on - strand, within BWI76_RS02650 at 541.487 kb on - strand, within BWI76_RS02650 at 541.824 kb on + strand at 541.874 kb on - strand at 541.940 kb on - strand, within BWI76_RS02655 at 542.146 kb on + strand at 542.146 kb on + strand at 542.146 kb on + strand at 542.146 kb on + strand at 542.154 kb on - strand at 542.154 kb on - strand at 542.154 kb on - strand at 542.154 kb on - strand at 542.164 kb on - strand at 542.193 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 540,892 - BWI76_RS02650 0.30 -0.4 540,892 - BWI76_RS02650 0.30 -1.3 541,050 + BWI76_RS02650 0.44 -0.1 541,079 + BWI76_RS02650 0.46 +0.9 541,106 - BWI76_RS02650 0.48 +0.4 541,113 - BWI76_RS02650 0.49 -1.6 541,115 + BWI76_RS02650 0.49 +0.1 541,178 + BWI76_RS02650 0.54 +1.6 541,351 - BWI76_RS02650 0.69 -0.5 541,457 + BWI76_RS02650 0.78 -0.2 541,457 + BWI76_RS02650 0.78 +0.7 541,457 + +2.2 541,465 - BWI76_RS02650 0.78 +0.3 541,465 - BWI76_RS02650 0.78 +0.2 541,465 - BWI76_RS02650 0.78 -0.7 541,487 - BWI76_RS02650 0.80 +0.3 541,824 + +1.0 541,874 - +1.5 541,940 - BWI76_RS02655 0.29 +0.4 542,146 + +0.1 542,146 + +0.0 542,146 + +0.0 542,146 + +0.4 542,154 - +0.0 542,154 - -0.7 542,154 - -0.0 542,154 - -0.4 542,164 - -2.1 542,193 + +0.1
Or see this region's nucleotide sequence