Experiment: Pyruvate-Sulfite (60-20mM) with Chromate 50uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaC and DVU0290 are separated by 15 nucleotides DVU0290 and potA are separated by 24 nucleotides potA and DVU0292 overlap by 16 nucleotides
DVU0289: moaC - molybdenum cofactor biosynthesis protein C (TIGR), at 333,951 to 334,577
moaC
DVU0290: DVU0290 - lipoprotein, putative (TIGR), at 334,593 to 335,201
DVU0290
DVU0291: potA - ABC transporter, ATP-binding protein (TIGR), at 335,226 to 336,290
potA
DVU0292: DVU0292 - hypothetical protein (TIGR), at 336,275 to 337,381
DVU0292
Position (kb) 335
336
337 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 334.273 kb on + strand, within moaC at 334.278 kb on + strand, within moaC at 334.281 kb on - strand, within moaC at 334.281 kb on - strand, within moaC at 334.301 kb on + strand, within moaC at 334.325 kb on + strand, within moaC at 334.325 kb on + strand, within moaC at 334.360 kb on + strand, within moaC at 334.368 kb on - strand, within moaC at 334.532 kb on + strand at 334.616 kb on + strand at 334.652 kb on + strand at 334.660 kb on - strand, within DVU0290 at 334.660 kb on - strand, within DVU0290 at 334.684 kb on + strand, within DVU0290 at 334.797 kb on + strand, within DVU0290 at 334.806 kb on - strand, within DVU0290 at 334.932 kb on + strand, within DVU0290 at 334.932 kb on + strand, within DVU0290 at 334.940 kb on - strand, within DVU0290 at 334.998 kb on - strand, within DVU0290 at 335.012 kb on + strand, within DVU0290 at 335.012 kb on + strand, within DVU0290 at 335.012 kb on + strand, within DVU0290 at 335.020 kb on - strand, within DVU0290 at 335.020 kb on - strand, within DVU0290 at 335.044 kb on + strand, within DVU0290 at 335.179 kb on + strand at 335.244 kb on - strand at 335.254 kb on - strand at 335.293 kb on - strand at 335.347 kb on + strand, within potA at 335.366 kb on + strand, within potA at 335.394 kb on - strand, within potA at 335.408 kb on - strand, within potA at 335.460 kb on - strand, within potA at 335.482 kb on - strand, within potA at 335.484 kb on + strand, within potA at 335.560 kb on - strand, within potA at 335.672 kb on + strand, within potA at 335.680 kb on - strand, within potA at 335.708 kb on + strand, within potA at 335.716 kb on - strand, within potA at 335.787 kb on + strand, within potA at 335.833 kb on + strand, within potA at 335.854 kb on + strand, within potA at 335.885 kb on - strand, within potA at 335.900 kb on - strand, within potA at 335.943 kb on - strand, within potA at 335.962 kb on + strand, within potA at 335.962 kb on + strand, within potA at 336.005 kb on + strand, within potA at 336.033 kb on + strand, within potA at 336.153 kb on + strand, within potA at 336.158 kb on + strand, within potA at 336.159 kb on - strand, within potA at 336.232 kb on - strand at 336.264 kb on + strand at 336.264 kb on + strand at 336.264 kb on + strand at 336.272 kb on - strand at 336.288 kb on + strand at 336.310 kb on + strand at 336.335 kb on - strand at 336.386 kb on - strand, within DVU0292 at 336.403 kb on + strand, within DVU0292 at 336.510 kb on + strand, within DVU0292 at 336.650 kb on + strand, within DVU0292 at 336.650 kb on + strand, within DVU0292 at 336.658 kb on - strand, within DVU0292 at 336.686 kb on - strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.830 kb on - strand, within DVU0292 at 336.844 kb on - strand, within DVU0292 at 336.861 kb on - strand, within DVU0292 at 336.873 kb on - strand, within DVU0292 at 336.900 kb on + strand, within DVU0292 at 336.908 kb on - strand, within DVU0292 at 336.968 kb on + strand, within DVU0292 at 337.025 kb on + strand, within DVU0292 at 337.025 kb on + strand, within DVU0292 at 337.028 kb on - strand, within DVU0292 at 337.152 kb on - strand, within DVU0292 at 337.208 kb on + strand, within DVU0292 at 337.237 kb on + strand, within DVU0292
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Chromate 50uM remove 334,273 + moaC DVU0289 0.51 -0.5 334,278 + moaC DVU0289 0.52 +0.2 334,281 - moaC DVU0289 0.53 +0.4 334,281 - moaC DVU0289 0.53 -0.5 334,301 + moaC DVU0289 0.56 -0.1 334,325 + moaC DVU0289 0.60 -0.4 334,325 + moaC DVU0289 0.60 -0.3 334,360 + moaC DVU0289 0.65 -0.3 334,368 - moaC DVU0289 0.67 -0.3 334,532 + +0.7 334,616 + -0.2 334,652 + -0.3 334,660 - DVU0290 0.11 +0.9 334,660 - DVU0290 0.11 +0.8 334,684 + DVU0290 0.15 -0.8 334,797 + DVU0290 0.33 +1.5 334,806 - DVU0290 0.35 -0.8 334,932 + DVU0290 0.56 -0.7 334,932 + DVU0290 0.56 -0.7 334,940 - DVU0290 0.57 -0.8 334,998 - DVU0290 0.67 -0.7 335,012 + DVU0290 0.69 +0.8 335,012 + DVU0290 0.69 +0.2 335,012 + DVU0290 0.69 -2.8 335,020 - DVU0290 0.70 +0.9 335,020 - DVU0290 0.70 -0.1 335,044 + DVU0290 0.74 +0.4 335,179 + -0.2 335,244 - -0.9 335,254 - -0.0 335,293 - -0.6 335,347 + potA DVU0291 0.11 +0.9 335,366 + potA DVU0291 0.13 -2.3 335,394 - potA DVU0291 0.16 -0.8 335,408 - potA DVU0291 0.17 -1.5 335,460 - potA DVU0291 0.22 -1.7 335,482 - potA DVU0291 0.24 -0.3 335,484 + potA DVU0291 0.24 -0.6 335,560 - potA DVU0291 0.31 -0.6 335,672 + potA DVU0291 0.42 -0.2 335,680 - potA DVU0291 0.43 -0.2 335,708 + potA DVU0291 0.45 -1.0 335,716 - potA DVU0291 0.46 -0.5 335,787 + potA DVU0291 0.53 -0.1 335,833 + potA DVU0291 0.57 -0.0 335,854 + potA DVU0291 0.59 +0.0 335,885 - potA DVU0291 0.62 -0.3 335,900 - potA DVU0291 0.63 -3.2 335,943 - potA DVU0291 0.67 -0.4 335,962 + potA DVU0291 0.69 +0.2 335,962 + potA DVU0291 0.69 -1.0 336,005 + potA DVU0291 0.73 -0.8 336,033 + potA DVU0291 0.76 -1.1 336,153 + potA DVU0291 0.87 +0.7 336,158 + potA DVU0291 0.88 +0.0 336,159 - potA DVU0291 0.88 -0.2 336,232 - +0.7 336,264 + +0.3 336,264 + +0.2 336,264 + +0.3 336,272 - +0.1 336,288 + -0.0 336,310 + -0.1 336,335 - -0.0 336,386 - DVU0292 0.10 +0.1 336,403 + DVU0292 0.12 -0.7 336,510 + DVU0292 0.21 +0.6 336,650 + DVU0292 0.34 -1.1 336,650 + DVU0292 0.34 +0.3 336,658 - DVU0292 0.35 -1.1 336,686 - DVU0292 0.37 +1.3 336,822 + DVU0292 0.49 +0.2 336,822 + DVU0292 0.49 -0.5 336,822 + DVU0292 0.49 -0.5 336,830 - DVU0292 0.50 -1.2 336,844 - DVU0292 0.51 -0.3 336,861 - DVU0292 0.53 +0.2 336,873 - DVU0292 0.54 +0.5 336,900 + DVU0292 0.56 -1.4 336,908 - DVU0292 0.57 -0.9 336,968 + DVU0292 0.63 -1.3 337,025 + DVU0292 0.68 -0.2 337,025 + DVU0292 0.68 -0.4 337,028 - DVU0292 0.68 +0.1 337,152 - DVU0292 0.79 -0.3 337,208 + DVU0292 0.84 -0.5 337,237 + DVU0292 0.87 +0.1
Or see this region's nucleotide sequence