Experiment: Pyruvate-Sulfite (60-20mM) with Chromate 50uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0852 and DVU0853 are separated by 55 nucleotides DVU0853 and DVU0854 are separated by 500 nucleotides
DVU0852: DVU0852 - extracellular solute-binding protein, putative (TIGR), at 941,500 to 942,297
DVU0852
DVU0853: DVU0853 - conserved hypothetical protein (TIGR), at 942,353 to 943,537
DVU0853
DVU0854: DVU0854 - NirD protein, putative (TIGR), at 944,038 to 944,568
DVU0854
Position (kb) 942
943
944 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 941.470 kb on + strand at 941.628 kb on + strand, within DVU0852 at 941.636 kb on - strand, within DVU0852 at 941.670 kb on - strand, within DVU0852 at 941.708 kb on + strand, within DVU0852 at 941.716 kb on - strand, within DVU0852 at 941.748 kb on - strand, within DVU0852 at 941.748 kb on - strand, within DVU0852 at 941.821 kb on + strand, within DVU0852 at 941.821 kb on + strand, within DVU0852 at 941.899 kb on + strand, within DVU0852 at 941.899 kb on + strand, within DVU0852 at 941.899 kb on + strand, within DVU0852 at 941.907 kb on - strand, within DVU0852 at 941.924 kb on - strand, within DVU0852 at 941.924 kb on - strand, within DVU0852 at 941.965 kb on + strand, within DVU0852 at 941.975 kb on - strand, within DVU0852 at 942.060 kb on + strand, within DVU0852 at 942.069 kb on + strand, within DVU0852 at 942.113 kb on - strand, within DVU0852 at 942.129 kb on + strand, within DVU0852 at 942.137 kb on - strand, within DVU0852 at 942.324 kb on - strand at 942.375 kb on + strand at 942.383 kb on - strand at 942.393 kb on - strand at 942.528 kb on + strand, within DVU0853 at 942.562 kb on + strand, within DVU0853 at 942.562 kb on + strand, within DVU0853 at 942.607 kb on + strand, within DVU0853 at 942.722 kb on - strand, within DVU0853 at 942.725 kb on + strand, within DVU0853 at 942.842 kb on - strand, within DVU0853 at 942.864 kb on + strand, within DVU0853 at 942.872 kb on - strand, within DVU0853 at 942.882 kb on + strand, within DVU0853 at 942.890 kb on - strand, within DVU0853 at 942.927 kb on + strand, within DVU0853 at 942.927 kb on + strand, within DVU0853 at 942.927 kb on + strand, within DVU0853 at 942.935 kb on - strand, within DVU0853 at 942.935 kb on - strand, within DVU0853 at 942.935 kb on - strand, within DVU0853 at 943.055 kb on - strand, within DVU0853 at 943.144 kb on + strand, within DVU0853 at 943.215 kb on + strand, within DVU0853 at 943.232 kb on - strand, within DVU0853 at 943.232 kb on - strand, within DVU0853 at 943.232 kb on - strand, within DVU0853 at 943.275 kb on - strand, within DVU0853 at 943.285 kb on - strand, within DVU0853 at 943.316 kb on + strand, within DVU0853 at 943.414 kb on + strand, within DVU0853 at 943.422 kb on - strand at 943.424 kb on + strand at 943.510 kb on - strand at 943.510 kb on - strand at 943.530 kb on - strand at 943.594 kb on - strand at 943.681 kb on + strand at 943.695 kb on + strand at 943.736 kb on + strand at 943.736 kb on + strand at 943.744 kb on - strand at 943.788 kb on - strand at 943.802 kb on + strand at 943.810 kb on - strand at 943.882 kb on + strand at 943.883 kb on + strand at 943.895 kb on + strand at 943.905 kb on - strand at 943.988 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Chromate 50uM remove 941,470 + -0.1 941,628 + DVU0852 0.16 +0.1 941,636 - DVU0852 0.17 -0.7 941,670 - DVU0852 0.21 -1.0 941,708 + DVU0852 0.26 +0.3 941,716 - DVU0852 0.27 -0.8 941,748 - DVU0852 0.31 -1.3 941,748 - DVU0852 0.31 +0.2 941,821 + DVU0852 0.40 -1.9 941,821 + DVU0852 0.40 +0.6 941,899 + DVU0852 0.50 -0.1 941,899 + DVU0852 0.50 -0.7 941,899 + DVU0852 0.50 -0.2 941,907 - DVU0852 0.51 +0.6 941,924 - DVU0852 0.53 +1.6 941,924 - DVU0852 0.53 -0.3 941,965 + DVU0852 0.58 -0.2 941,975 - DVU0852 0.60 -0.1 942,060 + DVU0852 0.70 +0.4 942,069 + DVU0852 0.71 -1.0 942,113 - DVU0852 0.77 -0.1 942,129 + DVU0852 0.79 -0.2 942,137 - DVU0852 0.80 +0.5 942,324 - -0.1 942,375 + +0.1 942,383 - +0.2 942,393 - -0.1 942,528 + DVU0853 0.15 +1.4 942,562 + DVU0853 0.18 +0.0 942,562 + DVU0853 0.18 +0.0 942,607 + DVU0853 0.21 +0.7 942,722 - DVU0853 0.31 -0.0 942,725 + DVU0853 0.31 -0.1 942,842 - DVU0853 0.41 +0.1 942,864 + DVU0853 0.43 +0.0 942,872 - DVU0853 0.44 -0.8 942,882 + DVU0853 0.45 +1.1 942,890 - DVU0853 0.45 +0.1 942,927 + DVU0853 0.48 -0.1 942,927 + DVU0853 0.48 +0.2 942,927 + DVU0853 0.48 +0.5 942,935 - DVU0853 0.49 -4.1 942,935 - DVU0853 0.49 -0.2 942,935 - DVU0853 0.49 -0.4 943,055 - DVU0853 0.59 -1.2 943,144 + DVU0853 0.67 -0.2 943,215 + DVU0853 0.73 -0.3 943,232 - DVU0853 0.74 -0.7 943,232 - DVU0853 0.74 +0.1 943,232 - DVU0853 0.74 +0.3 943,275 - DVU0853 0.78 +2.3 943,285 - DVU0853 0.79 +0.1 943,316 + DVU0853 0.81 +1.5 943,414 + DVU0853 0.90 +0.3 943,422 - +1.0 943,424 + +0.2 943,510 - -1.9 943,510 - -0.5 943,530 - -0.2 943,594 - -0.5 943,681 + -0.3 943,695 + -0.4 943,736 + -0.8 943,736 + +0.1 943,744 - +0.1 943,788 - +0.1 943,802 + -0.3 943,810 - -1.0 943,882 + -0.3 943,883 + -5.1 943,895 + -0.5 943,905 - -0.1 943,988 - -0.3
Or see this region's nucleotide sequence