Experiment: Pyruvate-Sulfite (60-20mM) with Chromate 50uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0753 and DVU0754 overlap by 4 nucleotides DVU0754 and DVU0755 are separated by 111 nucleotides DVU0755 and DVU0756 are separated by 211 nucleotides DVU0756 and DVU0757 overlap by 1 nucleotides
DVU0753: DVU0753 - amino acid ABC transporter, ATP-binding protein (TIGR), at 845,531 to 846,262
DVU0753
DVU0754: DVU0754 - hypothetical protein (TIGR), at 846,259 to 846,393
DVU0754
DVU0755: DVU0755 - sensor histidine kinase, putative (TIGR), at 846,505 to 847,872
DVU0755
DVU0756: DVU0756 - TPR domain protein (TIGR), at 848,084 to 848,797
DVU0756
DVU0757: DVU0757 - hypothetical protein (TIGR), at 848,797 to 849,117
DVU0757
Position (kb) 846
847
848 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 845.542 kb on + strand at 845.609 kb on - strand, within DVU0753 at 845.619 kb on + strand, within DVU0753 at 845.632 kb on - strand, within DVU0753 at 845.698 kb on - strand, within DVU0753 at 845.768 kb on + strand, within DVU0753 at 845.805 kb on - strand, within DVU0753 at 845.805 kb on - strand, within DVU0753 at 845.852 kb on - strand, within DVU0753 at 845.902 kb on + strand, within DVU0753 at 845.942 kb on - strand, within DVU0753 at 845.949 kb on + strand, within DVU0753 at 845.969 kb on - strand, within DVU0753 at 845.980 kb on - strand, within DVU0753 at 845.992 kb on + strand, within DVU0753 at 845.998 kb on + strand, within DVU0753 at 846.006 kb on - strand, within DVU0753 at 846.030 kb on + strand, within DVU0753 at 846.030 kb on + strand, within DVU0753 at 846.033 kb on - strand, within DVU0753 at 846.038 kb on - strand, within DVU0753 at 846.060 kb on + strand, within DVU0753 at 846.177 kb on - strand, within DVU0753 at 846.187 kb on - strand, within DVU0753 at 846.276 kb on - strand, within DVU0754 at 846.488 kb on + strand at 846.511 kb on - strand at 846.627 kb on - strand at 846.632 kb on - strand at 846.780 kb on - strand, within DVU0755 at 846.782 kb on - strand, within DVU0755 at 846.860 kb on + strand, within DVU0755 at 846.935 kb on - strand, within DVU0755 at 847.211 kb on + strand, within DVU0755 at 847.359 kb on + strand, within DVU0755 at 847.449 kb on - strand, within DVU0755 at 847.485 kb on + strand, within DVU0755 at 847.493 kb on - strand, within DVU0755 at 847.591 kb on - strand, within DVU0755 at 847.592 kb on - strand, within DVU0755 at 847.600 kb on + strand, within DVU0755 at 847.613 kb on - strand, within DVU0755 at 847.613 kb on - strand, within DVU0755 at 847.628 kb on + strand, within DVU0755 at 847.630 kb on - strand, within DVU0755 at 847.693 kb on + strand, within DVU0755 at 847.758 kb on + strand at 847.773 kb on - strand at 847.849 kb on + strand at 847.857 kb on - strand at 847.882 kb on + strand at 847.916 kb on + strand at 847.941 kb on + strand at 848.018 kb on - strand at 848.132 kb on + strand at 848.149 kb on + strand at 848.243 kb on + strand, within DVU0756 at 848.251 kb on - strand, within DVU0756 at 848.284 kb on + strand, within DVU0756 at 848.304 kb on + strand, within DVU0756 at 848.381 kb on - strand, within DVU0756 at 848.385 kb on + strand, within DVU0756 at 848.393 kb on - strand, within DVU0756 at 848.393 kb on - strand, within DVU0756 at 848.418 kb on - strand, within DVU0756 at 848.470 kb on - strand, within DVU0756 at 848.530 kb on - strand, within DVU0756 at 848.554 kb on - strand, within DVU0756 at 848.557 kb on - strand, within DVU0756 at 848.598 kb on - strand, within DVU0756 at 848.608 kb on + strand, within DVU0756 at 848.692 kb on - strand, within DVU0756
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Chromate 50uM remove 845,542 + -0.6 845,609 - DVU0753 0.11 -0.2 845,619 + DVU0753 0.12 -3.0 845,632 - DVU0753 0.14 +0.4 845,698 - DVU0753 0.23 -0.2 845,768 + DVU0753 0.32 -0.6 845,805 - DVU0753 0.37 -0.2 845,805 - DVU0753 0.37 +1.0 845,852 - DVU0753 0.44 -0.0 845,902 + DVU0753 0.51 -2.3 845,942 - DVU0753 0.56 -0.2 845,949 + DVU0753 0.57 -0.3 845,969 - DVU0753 0.60 -0.0 845,980 - DVU0753 0.61 +0.4 845,992 + DVU0753 0.63 +0.0 845,998 + DVU0753 0.64 -1.4 846,006 - DVU0753 0.65 -0.4 846,030 + DVU0753 0.68 -0.4 846,030 + DVU0753 0.68 +0.7 846,033 - DVU0753 0.69 -1.5 846,038 - DVU0753 0.69 -0.5 846,060 + DVU0753 0.72 -0.1 846,177 - DVU0753 0.88 -0.1 846,187 - DVU0753 0.90 +0.0 846,276 - DVU0754 0.13 +0.1 846,488 + -0.1 846,511 - +0.6 846,627 - +0.6 846,632 - +0.0 846,780 - DVU0755 0.20 -2.0 846,782 - DVU0755 0.20 +0.7 846,860 + DVU0755 0.26 -0.3 846,935 - DVU0755 0.31 -0.7 847,211 + DVU0755 0.52 -0.6 847,359 + DVU0755 0.62 -0.2 847,449 - DVU0755 0.69 -1.5 847,485 + DVU0755 0.72 -0.0 847,493 - DVU0755 0.72 -0.8 847,591 - DVU0755 0.79 +0.3 847,592 - DVU0755 0.79 +0.0 847,600 + DVU0755 0.80 -0.3 847,613 - DVU0755 0.81 +0.5 847,613 - DVU0755 0.81 -0.0 847,628 + DVU0755 0.82 +1.7 847,630 - DVU0755 0.82 -0.0 847,693 + DVU0755 0.87 -0.2 847,758 + -1.0 847,773 - -0.6 847,849 + -0.1 847,857 - -0.5 847,882 + -0.4 847,916 + +0.3 847,941 + -0.2 848,018 - -0.5 848,132 + +0.3 848,149 + +0.2 848,243 + DVU0756 0.22 +0.2 848,251 - DVU0756 0.23 +0.3 848,284 + DVU0756 0.28 -1.5 848,304 + DVU0756 0.31 +0.5 848,381 - DVU0756 0.42 +0.4 848,385 + DVU0756 0.42 +0.8 848,393 - DVU0756 0.43 +0.6 848,393 - DVU0756 0.43 +0.1 848,418 - DVU0756 0.47 -0.7 848,470 - DVU0756 0.54 -1.3 848,530 - DVU0756 0.62 -0.2 848,554 - DVU0756 0.66 -0.1 848,557 - DVU0756 0.66 +1.6 848,598 - DVU0756 0.72 +1.0 848,608 + DVU0756 0.73 -0.1 848,692 - DVU0756 0.85 +0.1
Or see this region's nucleotide sequence