Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0700 and Synpcc7942_0701 are separated by 54 nucleotides Synpcc7942_0701 and Synpcc7942_0702 overlap by 4 nucleotides Synpcc7942_0702 and smf are separated by 26 nucleotides
Synpcc7942_0700: Synpcc7942_0700 - hypothetical protein, at 691,824 to 692,744
_0700
Synpcc7942_0701: Synpcc7942_0701 - hypothetical protein, at 692,799 to 693,260
_0701
Synpcc7942_0702: Synpcc7942_0702 - hypothetical protein, at 693,257 to 694,045
_0702
Synpcc7942_0703: smf - DNA processing protein DprA, putative, at 694,072 to 695,280
smf
Position (kb) 692
693
694 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 691.829 kb on - strand at 691.847 kb on + strand at 691.847 kb on - strand at 691.847 kb on - strand at 691.883 kb on + strand at 691.920 kb on + strand, within Synpcc7942_0700 at 691.990 kb on + strand, within Synpcc7942_0700 at 692.006 kb on - strand, within Synpcc7942_0700 at 692.065 kb on + strand, within Synpcc7942_0700 at 692.192 kb on - strand, within Synpcc7942_0700 at 692.193 kb on + strand, within Synpcc7942_0700 at 692.193 kb on + strand, within Synpcc7942_0700 at 692.193 kb on + strand, within Synpcc7942_0700 at 692.203 kb on + strand, within Synpcc7942_0700 at 692.203 kb on + strand, within Synpcc7942_0700 at 692.233 kb on - strand, within Synpcc7942_0700 at 692.243 kb on - strand, within Synpcc7942_0700 at 692.256 kb on - strand, within Synpcc7942_0700 at 692.273 kb on + strand, within Synpcc7942_0700 at 692.291 kb on + strand, within Synpcc7942_0700 at 692.300 kb on + strand, within Synpcc7942_0700 at 692.339 kb on + strand, within Synpcc7942_0700 at 692.339 kb on + strand, within Synpcc7942_0700 at 692.339 kb on + strand, within Synpcc7942_0700 at 692.339 kb on + strand, within Synpcc7942_0700 at 692.347 kb on - strand, within Synpcc7942_0700 at 692.357 kb on - strand, within Synpcc7942_0700 at 692.374 kb on + strand, within Synpcc7942_0700 at 692.429 kb on + strand, within Synpcc7942_0700 at 692.434 kb on + strand, within Synpcc7942_0700 at 692.434 kb on + strand, within Synpcc7942_0700 at 692.434 kb on + strand, within Synpcc7942_0700 at 692.434 kb on + strand, within Synpcc7942_0700 at 692.434 kb on + strand, within Synpcc7942_0700 at 692.437 kb on - strand, within Synpcc7942_0700 at 692.486 kb on - strand, within Synpcc7942_0700 at 692.535 kb on + strand, within Synpcc7942_0700 at 692.664 kb on + strand at 692.664 kb on - strand at 692.691 kb on - strand at 692.693 kb on + strand at 692.696 kb on - strand at 692.698 kb on + strand at 692.714 kb on + strand at 692.724 kb on + strand at 692.732 kb on - strand at 692.732 kb on - strand at 692.732 kb on - strand at 692.732 kb on - strand at 692.773 kb on + strand at 692.783 kb on + strand at 692.791 kb on - strand at 692.801 kb on - strand at 692.824 kb on + strand at 692.858 kb on + strand, within Synpcc7942_0701 at 692.881 kb on + strand, within Synpcc7942_0701 at 692.930 kb on - strand, within Synpcc7942_0701 at 692.933 kb on + strand, within Synpcc7942_0701 at 693.007 kb on + strand, within Synpcc7942_0701 at 693.015 kb on - strand, within Synpcc7942_0701 at 693.037 kb on + strand, within Synpcc7942_0701 at 693.037 kb on + strand, within Synpcc7942_0701 at 693.041 kb on + strand, within Synpcc7942_0701 at 693.045 kb on - strand, within Synpcc7942_0701 at 693.046 kb on + strand, within Synpcc7942_0701 at 693.047 kb on + strand, within Synpcc7942_0701 at 693.051 kb on + strand, within Synpcc7942_0701 at 693.051 kb on + strand, within Synpcc7942_0701 at 693.059 kb on - strand, within Synpcc7942_0701 at 693.075 kb on - strand, within Synpcc7942_0701 at 693.085 kb on - strand, within Synpcc7942_0701 at 693.085 kb on - strand, within Synpcc7942_0701 at 693.095 kb on + strand, within Synpcc7942_0701 at 693.095 kb on + strand, within Synpcc7942_0701 at 693.103 kb on - strand, within Synpcc7942_0701 at 693.149 kb on + strand, within Synpcc7942_0701 at 693.199 kb on + strand, within Synpcc7942_0701 at 693.207 kb on + strand, within Synpcc7942_0701 at 693.207 kb on + strand, within Synpcc7942_0701 at 693.207 kb on + strand, within Synpcc7942_0701 at 693.230 kb on + strand at 693.230 kb on + strand at 693.230 kb on + strand at 693.230 kb on + strand at 693.230 kb on + strand at 693.230 kb on + strand at 693.230 kb on + strand at 693.238 kb on - strand at 693.240 kb on + strand at 693.240 kb on + strand at 693.240 kb on + strand at 693.240 kb on + strand at 693.240 kb on + strand at 693.240 kb on + strand at 693.245 kb on + strand at 693.245 kb on + strand at 693.245 kb on + strand at 693.248 kb on - strand at 693.248 kb on - strand at 693.250 kb on + strand at 693.296 kb on + strand at 693.300 kb on + strand at 693.306 kb on - strand at 693.328 kb on + strand at 693.500 kb on - strand, within Synpcc7942_0702 at 693.544 kb on + strand, within Synpcc7942_0702 at 693.567 kb on - strand, within Synpcc7942_0702 at 693.578 kb on - strand, within Synpcc7942_0702 at 693.587 kb on - strand, within Synpcc7942_0702 at 693.625 kb on + strand, within Synpcc7942_0702 at 693.627 kb on - strand, within Synpcc7942_0702 at 693.628 kb on - strand, within Synpcc7942_0702 at 693.632 kb on - strand, within Synpcc7942_0702 at 693.691 kb on + strand, within Synpcc7942_0702 at 693.691 kb on + strand, within Synpcc7942_0702 at 693.699 kb on - strand, within Synpcc7942_0702 at 693.703 kb on + strand, within Synpcc7942_0702 at 693.711 kb on - strand, within Synpcc7942_0702 at 693.711 kb on - strand, within Synpcc7942_0702 at 693.728 kb on + strand, within Synpcc7942_0702 at 693.748 kb on - strand, within Synpcc7942_0702 at 693.772 kb on + strand, within Synpcc7942_0702 at 693.775 kb on - strand, within Synpcc7942_0702 at 693.775 kb on - strand, within Synpcc7942_0702 at 693.780 kb on - strand, within Synpcc7942_0702 at 693.790 kb on - strand, within Synpcc7942_0702 at 693.791 kb on - strand, within Synpcc7942_0702 at 693.805 kb on - strand, within Synpcc7942_0702 at 693.857 kb on + strand, within Synpcc7942_0702 at 693.862 kb on + strand, within Synpcc7942_0702 at 693.862 kb on + strand, within Synpcc7942_0702 at 693.870 kb on - strand, within Synpcc7942_0702 at 693.870 kb on - strand, within Synpcc7942_0702 at 693.895 kb on + strand, within Synpcc7942_0702 at 693.895 kb on + strand, within Synpcc7942_0702 at 693.895 kb on + strand, within Synpcc7942_0702 at 693.898 kb on - strand, within Synpcc7942_0702 at 693.934 kb on + strand, within Synpcc7942_0702 at 693.942 kb on - strand, within Synpcc7942_0702 at 693.942 kb on - strand, within Synpcc7942_0702 at 693.975 kb on - strand at 693.978 kb on + strand at 693.983 kb on - strand at 693.983 kb on - strand at 693.988 kb on - strand at 693.996 kb on - strand at 693.996 kb on - strand at 694.006 kb on - strand at 694.029 kb on - strand at 694.047 kb on - strand at 694.069 kb on + strand at 694.075 kb on + strand at 694.077 kb on - strand at 694.080 kb on + strand at 694.128 kb on + strand at 694.134 kb on + strand at 694.139 kb on + strand at 694.141 kb on - strand at 694.147 kb on - strand at 694.153 kb on + strand at 694.158 kb on + strand at 694.163 kb on + strand at 694.163 kb on - strand at 694.166 kb on - strand at 694.171 kb on - strand at 694.195 kb on - strand, within smf at 694.200 kb on - strand, within smf at 694.206 kb on - strand, within smf at 694.216 kb on + strand, within smf at 694.243 kb on + strand, within smf at 694.246 kb on - strand, within smf at 694.259 kb on + strand, within smf at 694.260 kb on - strand, within smf
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 691,829 - -0.9 691,847 + +0.4 691,847 - -0.0 691,847 - -0.2 691,883 + -0.0 691,920 + Synpcc7942_0700 0.10 +0.3 691,990 + Synpcc7942_0700 0.18 -0.9 692,006 - Synpcc7942_0700 0.20 +0.0 692,065 + Synpcc7942_0700 0.26 +0.4 692,192 - Synpcc7942_0700 0.40 -0.7 692,193 + Synpcc7942_0700 0.40 -0.2 692,193 + Synpcc7942_0700 0.40 -0.9 692,193 + Synpcc7942_0700 0.40 +0.7 692,203 + Synpcc7942_0700 0.41 -1.3 692,203 + Synpcc7942_0700 0.41 +0.6 692,233 - Synpcc7942_0700 0.44 -1.3 692,243 - Synpcc7942_0700 0.45 -0.7 692,256 - Synpcc7942_0700 0.47 -0.9 692,273 + Synpcc7942_0700 0.49 -0.5 692,291 + Synpcc7942_0700 0.51 +0.2 692,300 + Synpcc7942_0700 0.52 +0.5 692,339 + Synpcc7942_0700 0.56 -0.2 692,339 + Synpcc7942_0700 0.56 -0.4 692,339 + Synpcc7942_0700 0.56 -0.1 692,339 + Synpcc7942_0700 0.56 -1.3 692,347 - Synpcc7942_0700 0.57 -0.1 692,357 - Synpcc7942_0700 0.58 -0.4 692,374 + Synpcc7942_0700 0.60 +0.3 692,429 + Synpcc7942_0700 0.66 +0.2 692,434 + Synpcc7942_0700 0.66 -0.5 692,434 + Synpcc7942_0700 0.66 -1.2 692,434 + Synpcc7942_0700 0.66 +0.9 692,434 + Synpcc7942_0700 0.66 +1.0 692,434 + Synpcc7942_0700 0.66 +1.4 692,437 - Synpcc7942_0700 0.67 +0.6 692,486 - Synpcc7942_0700 0.72 +1.0 692,535 + Synpcc7942_0700 0.77 +1.5 692,664 + -0.1 692,664 - +0.3 692,691 - -0.1 692,693 + -0.8 692,696 - +0.3 692,698 + -0.8 692,714 + +0.1 692,724 + +0.7 692,732 - -1.3 692,732 - +1.7 692,732 - +0.5 692,732 - -2.0 692,773 + +0.2 692,783 + -1.0 692,791 - +0.3 692,801 - -2.1 692,824 + -0.0 692,858 + Synpcc7942_0701 0.13 +0.0 692,881 + Synpcc7942_0701 0.18 +1.1 692,930 - Synpcc7942_0701 0.28 +1.7 692,933 + Synpcc7942_0701 0.29 +0.8 693,007 + Synpcc7942_0701 0.45 +0.6 693,015 - Synpcc7942_0701 0.47 -0.1 693,037 + Synpcc7942_0701 0.52 +0.5 693,037 + Synpcc7942_0701 0.52 -0.7 693,041 + Synpcc7942_0701 0.52 +1.7 693,045 - Synpcc7942_0701 0.53 -1.8 693,046 + Synpcc7942_0701 0.53 +0.3 693,047 + Synpcc7942_0701 0.54 +0.2 693,051 + Synpcc7942_0701 0.55 +0.1 693,051 + Synpcc7942_0701 0.55 +0.3 693,059 - Synpcc7942_0701 0.56 -1.0 693,075 - Synpcc7942_0701 0.60 +0.6 693,085 - Synpcc7942_0701 0.62 +1.3 693,085 - Synpcc7942_0701 0.62 +0.1 693,095 + Synpcc7942_0701 0.64 +0.2 693,095 + Synpcc7942_0701 0.64 +0.4 693,103 - Synpcc7942_0701 0.66 +0.6 693,149 + Synpcc7942_0701 0.76 +1.4 693,199 + Synpcc7942_0701 0.87 +1.6 693,207 + Synpcc7942_0701 0.88 +0.7 693,207 + Synpcc7942_0701 0.88 -1.3 693,207 + Synpcc7942_0701 0.88 +0.1 693,230 + -0.5 693,230 + +0.5 693,230 + -0.5 693,230 + +1.5 693,230 + +0.2 693,230 + +2.4 693,230 + +0.9 693,238 - +0.3 693,240 + +0.3 693,240 + +0.7 693,240 + +0.3 693,240 + -0.4 693,240 + +0.1 693,240 + -0.3 693,245 + +0.1 693,245 + +0.5 693,245 + -2.1 693,248 - +1.5 693,248 - +0.2 693,250 + -0.2 693,296 + +1.1 693,300 + +0.9 693,306 - +0.0 693,328 + +0.3 693,500 - Synpcc7942_0702 0.31 -0.9 693,544 + Synpcc7942_0702 0.36 +0.9 693,567 - Synpcc7942_0702 0.39 +0.3 693,578 - Synpcc7942_0702 0.41 -0.4 693,587 - Synpcc7942_0702 0.42 +0.1 693,625 + Synpcc7942_0702 0.47 -0.0 693,627 - Synpcc7942_0702 0.47 +0.5 693,628 - Synpcc7942_0702 0.47 +0.1 693,632 - Synpcc7942_0702 0.48 +0.7 693,691 + Synpcc7942_0702 0.55 -0.8 693,691 + Synpcc7942_0702 0.55 -1.4 693,699 - Synpcc7942_0702 0.56 -0.4 693,703 + Synpcc7942_0702 0.57 -0.3 693,711 - Synpcc7942_0702 0.58 -0.4 693,711 - Synpcc7942_0702 0.58 +0.4 693,728 + Synpcc7942_0702 0.60 -0.1 693,748 - Synpcc7942_0702 0.62 -0.1 693,772 + Synpcc7942_0702 0.65 +1.2 693,775 - Synpcc7942_0702 0.66 -0.2 693,775 - Synpcc7942_0702 0.66 +0.4 693,780 - Synpcc7942_0702 0.66 +0.7 693,790 - Synpcc7942_0702 0.68 +0.7 693,791 - Synpcc7942_0702 0.68 -1.2 693,805 - Synpcc7942_0702 0.69 -0.1 693,857 + Synpcc7942_0702 0.76 -0.4 693,862 + Synpcc7942_0702 0.77 -0.2 693,862 + Synpcc7942_0702 0.77 +2.0 693,870 - Synpcc7942_0702 0.78 -0.5 693,870 - Synpcc7942_0702 0.78 -0.5 693,895 + Synpcc7942_0702 0.81 +0.8 693,895 + Synpcc7942_0702 0.81 -1.3 693,895 + Synpcc7942_0702 0.81 +0.7 693,898 - Synpcc7942_0702 0.81 -0.6 693,934 + Synpcc7942_0702 0.86 +1.1 693,942 - Synpcc7942_0702 0.87 +0.2 693,942 - Synpcc7942_0702 0.87 +0.5 693,975 - +1.6 693,978 + +0.7 693,983 - +0.9 693,983 - -0.3 693,988 - +0.0 693,996 - +0.7 693,996 - -0.7 694,006 - +0.4 694,029 - -0.7 694,047 - +0.3 694,069 + -0.0 694,075 + +0.2 694,077 - +0.2 694,080 + -1.0 694,128 + -1.7 694,134 + -2.2 694,139 + -0.4 694,141 - -1.7 694,147 - -2.9 694,153 + +0.6 694,158 + +0.2 694,163 + -2.1 694,163 - +0.7 694,166 - -3.5 694,171 - -0.7 694,195 - smf Synpcc7942_0703 0.10 +0.9 694,200 - smf Synpcc7942_0703 0.11 -0.5 694,206 - smf Synpcc7942_0703 0.11 +1.0 694,216 + smf Synpcc7942_0703 0.12 +0.1 694,243 + smf Synpcc7942_0703 0.14 +1.2 694,246 - smf Synpcc7942_0703 0.14 +0.0 694,259 + smf Synpcc7942_0703 0.15 +0.4 694,260 - smf Synpcc7942_0703 0.16 -0.4
Or see this region's nucleotide sequence