Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22530 and BWI76_RS22535 overlap by 1 nucleotides BWI76_RS22535 and BWI76_RS22540 overlap by 4 nucleotides
BWI76_RS22530: BWI76_RS22530 - macrolide ABC transporter permease/ATP-binding protein MacB, at 4,696,113 to 4,698,056
_RS22530
BWI76_RS22535: BWI76_RS22535 - membrane fusion protein of a type I secretion system, at 4,698,056 to 4,699,216
_RS22535
BWI76_RS22540: BWI76_RS22540 - ABC transporter ATP-binding protein/permease, at 4,699,213 to 4,701,324
_RS22540
Position (kb) 4698
4699
4700 Strain fitness (log2 ratio) -2
-1
0
1 at 4697.212 kb on + strand, within BWI76_RS22530 at 4697.371 kb on + strand, within BWI76_RS22530 at 4697.526 kb on + strand, within BWI76_RS22530 at 4697.637 kb on - strand, within BWI76_RS22530 at 4697.759 kb on - strand, within BWI76_RS22530 at 4697.800 kb on - strand, within BWI76_RS22530 at 4698.030 kb on + strand at 4698.171 kb on - strand at 4698.195 kb on + strand, within BWI76_RS22535 at 4698.260 kb on - strand, within BWI76_RS22535 at 4698.260 kb on - strand, within BWI76_RS22535 at 4698.356 kb on + strand, within BWI76_RS22535 at 4698.477 kb on - strand, within BWI76_RS22535 at 4698.536 kb on - strand, within BWI76_RS22535 at 4698.536 kb on - strand, within BWI76_RS22535 at 4698.625 kb on + strand, within BWI76_RS22535 at 4698.668 kb on - strand, within BWI76_RS22535 at 4698.671 kb on + strand, within BWI76_RS22535 at 4698.764 kb on - strand, within BWI76_RS22535 at 4698.766 kb on + strand, within BWI76_RS22535 at 4698.784 kb on + strand, within BWI76_RS22535 at 4698.784 kb on + strand, within BWI76_RS22535 at 4698.784 kb on + strand, within BWI76_RS22535 at 4698.792 kb on - strand, within BWI76_RS22535 at 4698.792 kb on - strand, within BWI76_RS22535 at 4698.826 kb on - strand, within BWI76_RS22535 at 4698.832 kb on - strand, within BWI76_RS22535 at 4698.952 kb on - strand, within BWI76_RS22535 at 4698.999 kb on + strand, within BWI76_RS22535 at 4698.999 kb on + strand, within BWI76_RS22535 at 4699.193 kb on - strand at 4699.273 kb on - strand at 4699.309 kb on - strand at 4699.330 kb on - strand at 4699.409 kb on - strand at 4699.467 kb on + strand, within BWI76_RS22540 at 4699.475 kb on - strand, within BWI76_RS22540 at 4699.477 kb on - strand, within BWI76_RS22540 at 4699.572 kb on - strand, within BWI76_RS22540 at 4699.572 kb on - strand, within BWI76_RS22540 at 4699.672 kb on - strand, within BWI76_RS22540 at 4699.723 kb on + strand, within BWI76_RS22540 at 4699.891 kb on - strand, within BWI76_RS22540 at 4699.977 kb on - strand, within BWI76_RS22540 at 4700.012 kb on - strand, within BWI76_RS22540 at 4700.162 kb on + strand, within BWI76_RS22540 at 4700.198 kb on - strand, within BWI76_RS22540
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 4,697,212 + BWI76_RS22530 0.57 -0.5 4,697,371 + BWI76_RS22530 0.65 -1.2 4,697,526 + BWI76_RS22530 0.73 -0.5 4,697,637 - BWI76_RS22530 0.78 +0.4 4,697,759 - BWI76_RS22530 0.85 +0.1 4,697,800 - BWI76_RS22530 0.87 +0.3 4,698,030 + -0.8 4,698,171 - -0.1 4,698,195 + BWI76_RS22535 0.12 +0.3 4,698,260 - BWI76_RS22535 0.18 +1.2 4,698,260 - BWI76_RS22535 0.18 +0.8 4,698,356 + BWI76_RS22535 0.26 -0.3 4,698,477 - BWI76_RS22535 0.36 +0.1 4,698,536 - BWI76_RS22535 0.41 +0.9 4,698,536 - BWI76_RS22535 0.41 -0.2 4,698,625 + BWI76_RS22535 0.49 -0.2 4,698,668 - BWI76_RS22535 0.53 -1.7 4,698,671 + BWI76_RS22535 0.53 -0.1 4,698,764 - BWI76_RS22535 0.61 -0.1 4,698,766 + BWI76_RS22535 0.61 -0.5 4,698,784 + BWI76_RS22535 0.63 -0.2 4,698,784 + BWI76_RS22535 0.63 +0.3 4,698,784 + BWI76_RS22535 0.63 -0.5 4,698,792 - BWI76_RS22535 0.63 +0.3 4,698,792 - BWI76_RS22535 0.63 -0.5 4,698,826 - BWI76_RS22535 0.66 -1.5 4,698,832 - BWI76_RS22535 0.67 -0.0 4,698,952 - BWI76_RS22535 0.77 -0.4 4,698,999 + BWI76_RS22535 0.81 +0.1 4,698,999 + BWI76_RS22535 0.81 +0.5 4,699,193 - +0.7 4,699,273 - -0.3 4,699,309 - +0.4 4,699,330 - +0.1 4,699,409 - -0.1 4,699,467 + BWI76_RS22540 0.12 -0.5 4,699,475 - BWI76_RS22540 0.12 -0.8 4,699,477 - BWI76_RS22540 0.12 -2.1 4,699,572 - BWI76_RS22540 0.17 -0.2 4,699,572 - BWI76_RS22540 0.17 +0.2 4,699,672 - BWI76_RS22540 0.22 -0.5 4,699,723 + BWI76_RS22540 0.24 -0.3 4,699,891 - BWI76_RS22540 0.32 +0.3 4,699,977 - BWI76_RS22540 0.36 -0.1 4,700,012 - BWI76_RS22540 0.38 -0.0 4,700,162 + BWI76_RS22540 0.45 -0.2 4,700,198 - BWI76_RS22540 0.47 +0.1
Or see this region's nucleotide sequence