Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06240 and BWI76_RS06245 are separated by 123 nucleotides BWI76_RS06245 and BWI76_RS06250 are separated by 152 nucleotides
BWI76_RS06240: BWI76_RS06240 - branched-chain amino acid transport system 2 carrier protein BrnQ, at 1,310,162 to 1,311,481
_RS06240
BWI76_RS06245: BWI76_RS06245 - proline-specific permease ProY, at 1,311,605 to 1,312,975
_RS06245
BWI76_RS06250: BWI76_RS06250 - alpha-glycosidase, at 1,313,128 to 1,314,945
_RS06250
Position (kb)
1311
1312
1313 Strain fitness (log2 ratio)
-1
0
1
2 at 1311.041 kb on + strand, within BWI76_RS06240 at 1311.058 kb on - strand, within BWI76_RS06240 at 1311.155 kb on + strand, within BWI76_RS06240 at 1311.318 kb on - strand, within BWI76_RS06240 at 1311.352 kb on + strand at 1311.352 kb on + strand at 1311.386 kb on + strand at 1311.396 kb on + strand at 1311.487 kb on + strand at 1311.490 kb on + strand at 1311.490 kb on + strand at 1311.492 kb on + strand at 1311.552 kb on + strand at 1311.681 kb on + strand at 1312.024 kb on - strand, within BWI76_RS06245 at 1312.316 kb on - strand, within BWI76_RS06245 at 1312.316 kb on - strand, within BWI76_RS06245 at 1312.472 kb on + strand, within BWI76_RS06245 at 1312.971 kb on - strand at 1313.071 kb on + strand at 1313.089 kb on + strand at 1313.123 kb on - strand at 1313.145 kb on + strand at 1313.556 kb on + strand at 1313.584 kb on + strand, within BWI76_RS06250 at 1313.584 kb on + strand, within BWI76_RS06250
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 1,311,041 + BWI76_RS06240 0.67 -0.0 1,311,058 - BWI76_RS06240 0.68 -0.3 1,311,155 + BWI76_RS06240 0.75 +0.6 1,311,318 - BWI76_RS06240 0.88 -0.2 1,311,352 + -0.1 1,311,352 + -0.7 1,311,386 + -1.1 1,311,396 + +0.1 1,311,487 + +0.1 1,311,490 + -0.2 1,311,490 + +2.0 1,311,492 + +0.0 1,311,552 + -0.0 1,311,681 + +0.6 1,312,024 - BWI76_RS06245 0.31 -0.5 1,312,316 - BWI76_RS06245 0.52 +0.3 1,312,316 - BWI76_RS06245 0.52 +0.2 1,312,472 + BWI76_RS06245 0.63 -0.7 1,312,971 - +0.0 1,313,071 + -0.3 1,313,089 + +0.9 1,313,123 - +0.1 1,313,145 + +0.7 1,313,556 + -0.8 1,313,584 + BWI76_RS06250 0.25 -0.4 1,313,584 + BWI76_RS06250 0.25 -0.4
Or see this region's nucleotide sequence