Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02775 and BWI76_RS02780 overlap by 4 nucleotides BWI76_RS02780 and BWI76_RS02785 are separated by 2 nucleotides BWI76_RS02785 and BWI76_RS02790 are separated by 156 nucleotides
BWI76_RS02775: BWI76_RS02775 - outer membrane protein assembly factor, at 563,214 to 564,947
_RS02775
BWI76_RS02780: BWI76_RS02780 - translocation and assembly module TamB, at 564,944 to 568,720
_RS02780
BWI76_RS02785: BWI76_RS02785 - AIG2 family protein, at 568,723 to 569,067
_RS02785
BWI76_RS02790: BWI76_RS02790 - inorganic pyrophosphatase, at 569,224 to 569,751
_RS02790
Position (kb) 564
565
566
567
568
569 Strain fitness (log2 ratio) -1
0
1 at 564.194 kb on - strand, within BWI76_RS02775 at 564.211 kb on + strand, within BWI76_RS02775 at 564.344 kb on - strand, within BWI76_RS02775 at 564.458 kb on + strand, within BWI76_RS02775 at 564.466 kb on + strand, within BWI76_RS02775 at 564.596 kb on + strand, within BWI76_RS02775 at 564.965 kb on + strand at 565.182 kb on + strand at 565.321 kb on + strand at 565.348 kb on - strand, within BWI76_RS02780 at 565.358 kb on - strand, within BWI76_RS02780 at 565.546 kb on + strand, within BWI76_RS02780 at 565.580 kb on - strand, within BWI76_RS02780 at 565.698 kb on + strand, within BWI76_RS02780 at 565.706 kb on - strand, within BWI76_RS02780 at 565.706 kb on - strand, within BWI76_RS02780 at 565.769 kb on + strand, within BWI76_RS02780 at 565.774 kb on + strand, within BWI76_RS02780 at 566.105 kb on - strand, within BWI76_RS02780 at 566.116 kb on - strand, within BWI76_RS02780 at 566.172 kb on - strand, within BWI76_RS02780 at 566.185 kb on + strand, within BWI76_RS02780 at 566.307 kb on + strand, within BWI76_RS02780 at 566.323 kb on - strand, within BWI76_RS02780 at 566.345 kb on - strand, within BWI76_RS02780 at 566.362 kb on - strand, within BWI76_RS02780 at 566.466 kb on + strand, within BWI76_RS02780 at 566.466 kb on + strand, within BWI76_RS02780 at 566.466 kb on + strand, within BWI76_RS02780 at 566.474 kb on - strand, within BWI76_RS02780 at 566.507 kb on + strand, within BWI76_RS02780 at 566.550 kb on + strand, within BWI76_RS02780 at 566.697 kb on + strand, within BWI76_RS02780 at 566.824 kb on + strand, within BWI76_RS02780 at 567.018 kb on - strand, within BWI76_RS02780 at 567.064 kb on + strand, within BWI76_RS02780 at 567.065 kb on - strand, within BWI76_RS02780 at 567.094 kb on - strand, within BWI76_RS02780 at 567.179 kb on + strand, within BWI76_RS02780 at 567.250 kb on + strand, within BWI76_RS02780 at 567.376 kb on - strand, within BWI76_RS02780 at 567.419 kb on + strand, within BWI76_RS02780 at 567.444 kb on + strand, within BWI76_RS02780 at 567.573 kb on - strand, within BWI76_RS02780 at 567.941 kb on + strand, within BWI76_RS02780 at 567.987 kb on + strand, within BWI76_RS02780 at 568.111 kb on + strand, within BWI76_RS02780 at 568.372 kb on + strand at 568.379 kb on - strand at 568.394 kb on + strand at 568.475 kb on - strand at 568.530 kb on + strand at 568.550 kb on + strand at 568.571 kb on - strand at 568.622 kb on + strand at 568.685 kb on - strand at 568.745 kb on + strand at 568.980 kb on - strand, within BWI76_RS02785 at 569.011 kb on + strand, within BWI76_RS02785 at 569.019 kb on - strand, within BWI76_RS02785
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 564,194 - BWI76_RS02775 0.57 +1.1 564,211 + BWI76_RS02775 0.57 +1.5 564,344 - BWI76_RS02775 0.65 +0.1 564,458 + BWI76_RS02775 0.72 -0.1 564,466 + BWI76_RS02775 0.72 -0.0 564,596 + BWI76_RS02775 0.80 +0.8 564,965 + +0.4 565,182 + -0.1 565,321 + +1.0 565,348 - BWI76_RS02780 0.11 +0.4 565,358 - BWI76_RS02780 0.11 +0.8 565,546 + BWI76_RS02780 0.16 +0.4 565,580 - BWI76_RS02780 0.17 +0.9 565,698 + BWI76_RS02780 0.20 +0.4 565,706 - BWI76_RS02780 0.20 +0.2 565,706 - BWI76_RS02780 0.20 +0.8 565,769 + BWI76_RS02780 0.22 +0.7 565,774 + BWI76_RS02780 0.22 +0.2 566,105 - BWI76_RS02780 0.31 +0.4 566,116 - BWI76_RS02780 0.31 +0.3 566,172 - BWI76_RS02780 0.33 +0.6 566,185 + BWI76_RS02780 0.33 +0.2 566,307 + BWI76_RS02780 0.36 +0.7 566,323 - BWI76_RS02780 0.37 +0.7 566,345 - BWI76_RS02780 0.37 +0.1 566,362 - BWI76_RS02780 0.38 +0.1 566,466 + BWI76_RS02780 0.40 +0.5 566,466 + BWI76_RS02780 0.40 -0.3 566,466 + BWI76_RS02780 0.40 +0.5 566,474 - BWI76_RS02780 0.41 +0.7 566,507 + BWI76_RS02780 0.41 +0.8 566,550 + BWI76_RS02780 0.43 +0.9 566,697 + BWI76_RS02780 0.46 +0.4 566,824 + BWI76_RS02780 0.50 +0.3 567,018 - BWI76_RS02780 0.55 +0.7 567,064 + BWI76_RS02780 0.56 +0.6 567,065 - BWI76_RS02780 0.56 -0.4 567,094 - BWI76_RS02780 0.57 -0.2 567,179 + BWI76_RS02780 0.59 -1.1 567,250 + BWI76_RS02780 0.61 +0.1 567,376 - BWI76_RS02780 0.64 +0.1 567,419 + BWI76_RS02780 0.66 +1.2 567,444 + BWI76_RS02780 0.66 +0.7 567,573 - BWI76_RS02780 0.70 +0.2 567,941 + BWI76_RS02780 0.79 +0.2 567,987 + BWI76_RS02780 0.81 +0.3 568,111 + BWI76_RS02780 0.84 +0.3 568,372 + +0.6 568,379 - +0.5 568,394 + +0.4 568,475 - -0.2 568,530 + +0.6 568,550 + -0.5 568,571 - +0.1 568,622 + +0.3 568,685 - -0.6 568,745 + -0.4 568,980 - BWI76_RS02785 0.74 +0.5 569,011 + BWI76_RS02785 0.83 -0.1 569,019 - BWI76_RS02785 0.86 +0.8
Or see this region's nucleotide sequence