Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2053

Experiment: L-Glutamine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N)
2,129,344	-				-1.7
2,129,344	-				+0.4
2,129,349	-				-0.5
2,129,357	+				-2.5
2,129,372	+				-2.6
2,129,392	-				-1.1
2,129,403	-		Synpcc7942_2052	0.10	-0.6
2,129,423	+		Synpcc7942_2052	0.12	-2.4
2,129,431	-		Synpcc7942_2052	0.13	+0.2
2,129,448	+		Synpcc7942_2052	0.15	-3.3
2,129,482	+		Synpcc7942_2052	0.19	-1.5
2,129,482	+		Synpcc7942_2052	0.19	-0.9
2,129,488	+		Synpcc7942_2052	0.20	-2.7
2,129,489	+		Synpcc7942_2052	0.20	-2.8
2,129,512	+		Synpcc7942_2052	0.23	-0.6
2,129,548	+		Synpcc7942_2052	0.27	-0.7
2,129,607	+		Synpcc7942_2052	0.34	-1.4
2,129,638	+		Synpcc7942_2052	0.37	-0.7
2,129,642	-		Synpcc7942_2052	0.38	-1.6
2,129,664	+		Synpcc7942_2052	0.40	-3.2
2,129,689	-		Synpcc7942_2052	0.43	-0.5
2,129,762	+		Synpcc7942_2052	0.51	-1.7
2,129,785	-		Synpcc7942_2052	0.54	-0.0
2,129,862	+		Synpcc7942_2052	0.63	-3.2
2,129,865	-		Synpcc7942_2052	0.63	-0.6
2,129,870	+		Synpcc7942_2052	0.64	-2.5
2,129,904	-		Synpcc7942_2052	0.68	-3.5
2,129,905	+		Synpcc7942_2052	0.68	-1.9
2,129,949	+		Synpcc7942_2052	0.73	+0.6
2,129,950	+		Synpcc7942_2052	0.73	-1.6
2,129,951	+		Synpcc7942_2052	0.73	-0.4
2,129,951	+		Synpcc7942_2052	0.73	+1.4
2,129,957	-				+1.0
2,130,008	+		Synpcc7942_2052	0.79	-2.1
2,130,044	+		Synpcc7942_2052	0.84	-2.2
2,130,051	+		Synpcc7942_2052	0.84	+0.2
2,130,051	-		Synpcc7942_2052	0.84	-1.4
2,130,081	+		Synpcc7942_2052	0.88	-1.8
2,130,096	-		Synpcc7942_2052	0.90	-2.1
2,130,166	+				+1.0
2,130,166	+				+0.4
2,130,166	+				+2.0
2,130,184	+				+0.2
2,130,217	-				+0.6
2,130,248	+				-1.1
2,130,271	+				-0.5
2,130,278	+				+1.0
2,130,280	-				-0.8
2,130,290	+				-0.7
2,130,338	-				-1.5
2,130,340	+				-1.8
2,130,340	+				-0.9
2,130,376	-				-1.0
2,130,382	+				+1.6
2,130,382	+				-1.5
2,130,382	+				-2.3
2,130,390	-				-0.7
2,130,390	-				-2.1
2,130,390	-				-1.1
2,130,390	-				+0.5
2,130,390	-				+0.5
2,130,390	-				-0.9
2,130,392	+				-1.7
2,130,392	+				-0.0
2,130,392	+				-0.2
2,130,392	+				+2.3
2,130,394	+				+0.8
2,130,397	+				+0.1
2,130,400	-				-1.7
2,130,400	-				+0.1
2,130,400	-				-2.0
2,130,400	-				-0.7
2,130,400	-				-0.8
2,130,407	+				-1.3
2,130,407	+				-0.6
2,130,409	+				+0.2
2,130,415	-				-0.4
2,130,425	-				-0.5
2,130,437	+				-0.8
2,130,437	+				+0.0
2,130,452	-				-2.0
2,130,457	+				-1.5
2,130,465	-				-1.0
2,130,496	+				-0.8
2,130,499	-				+0.3
2,130,515	+				-0.5
2,130,558	-		Synpcc7942_2053	0.12	-0.0
2,130,575	-		Synpcc7942_2053	0.13	+1.2
2,130,603	+		Synpcc7942_2053	0.14	-0.6
2,130,625	-		Synpcc7942_2053	0.15	+0.4
2,130,662	-		Synpcc7942_2053	0.17	-1.2
2,130,733	+		Synpcc7942_2053	0.21	-1.5
2,130,787	+		Synpcc7942_2053	0.24	-1.2
2,130,828	+		Synpcc7942_2053	0.26	-2.3
2,130,828	+		Synpcc7942_2053	0.26	-0.7
2,130,828	+		Synpcc7942_2053	0.26	-1.2
2,130,828	+		Synpcc7942_2053	0.26	-0.5
2,130,834	-		Synpcc7942_2053	0.26	-1.1
2,130,836	-		Synpcc7942_2053	0.26	-1.6
2,130,836	-		Synpcc7942_2053	0.26	+0.6
2,130,836	-		Synpcc7942_2053	0.26	-2.8
2,130,836	-		Synpcc7942_2053	0.26	-0.7
2,130,846	+		Synpcc7942_2053	0.27	-1.9
2,130,854	-		Synpcc7942_2053	0.27	-0.5
2,130,870	+		Synpcc7942_2053	0.28	-0.3
2,130,873	-		Synpcc7942_2053	0.28	-0.2
2,130,900	+		Synpcc7942_2053	0.30	-2.1
2,130,925	-		Synpcc7942_2053	0.31	-1.1
2,130,933	+		Synpcc7942_2053	0.31	-1.7
2,130,933	-		Synpcc7942_2053	0.31	-1.4
2,130,948	+		Synpcc7942_2053	0.32	-1.4
2,131,044	+		Synpcc7942_2053	0.37	+2.0
2,131,063	-		Synpcc7942_2053	0.38	-1.0
2,131,078	+		Synpcc7942_2053	0.39	-2.8
2,131,078	-		Synpcc7942_2053	0.39	-1.2
2,131,123	-		Synpcc7942_2053	0.41	-1.0
2,131,133	-		Synpcc7942_2053	0.42	+3.0
2,131,151	+		Synpcc7942_2053	0.43	+0.3
2,131,151	+		Synpcc7942_2053	0.43	-1.5
2,131,159	-		Synpcc7942_2053	0.43	-1.8
2,131,159	-		Synpcc7942_2053	0.43	-0.6
2,131,198	+		Synpcc7942_2053	0.45	-1.0
2,131,201	+		Synpcc7942_2053	0.45	+1.0
2,131,203	+		Synpcc7942_2053	0.45	-1.2
2,131,206	-		Synpcc7942_2053	0.45	-0.0
2,131,241	+		Synpcc7942_2053	0.47	-1.0
2,131,249	-		Synpcc7942_2053	0.48	-0.9
2,131,249	-		Synpcc7942_2053	0.48	-1.2
2,131,249	-		Synpcc7942_2053	0.48	-1.4
2,131,250	+		Synpcc7942_2053	0.48	-0.0
2,131,274	+		Synpcc7942_2053	0.49	-0.3
2,131,308	+		Synpcc7942_2053	0.51	-1.4
2,131,317	+		Synpcc7942_2053	0.51	+1.4
2,131,317	+		Synpcc7942_2053	0.51	+1.2
2,131,325	-		Synpcc7942_2053	0.52	-0.1
2,131,378	+		Synpcc7942_2053	0.54	+1.2
2,131,386	-		Synpcc7942_2053	0.55	-1.2
2,131,386	-		Synpcc7942_2053	0.55	-1.4
2,131,391	+		Synpcc7942_2053	0.55	-1.7
2,131,434	+		Synpcc7942_2053	0.57	-3.0
2,131,436	+		Synpcc7942_2053	0.57	-1.3
2,131,442	-		Synpcc7942_2053	0.58	-2.3
2,131,460	+		Synpcc7942_2053	0.59	-1.7
2,131,468	+		Synpcc7942_2053	0.59	-1.3
2,131,491	+		Synpcc7942_2053	0.60	-1.5
2,131,500	+		Synpcc7942_2053	0.61	-1.5
2,131,505	+		Synpcc7942_2053	0.61	+0.2
2,131,519	+		Synpcc7942_2053	0.62	+0.1
2,131,580	+		Synpcc7942_2053	0.65	-0.6
2,131,580	+		Synpcc7942_2053	0.65	-1.4
2,131,580	+		Synpcc7942_2053	0.65	-2.1
2,131,580	+		Synpcc7942_2053	0.65	+0.1
2,131,580	+		Synpcc7942_2053	0.65	-2.3
2,131,580	+		Synpcc7942_2053	0.65	-0.9
2,131,588	-		Synpcc7942_2053	0.65	-3.1
2,131,588	-		Synpcc7942_2053	0.65	-1.5
2,131,588	-		Synpcc7942_2053	0.65	-0.8
2,131,588	-		Synpcc7942_2053	0.65	-1.8
2,131,592	+		Synpcc7942_2053	0.65	+0.1
2,131,594	+		Synpcc7942_2053	0.66	-1.6
2,131,599	+		Synpcc7942_2053	0.66	-2.7
2,131,607	-		Synpcc7942_2053	0.66	-0.8
2,131,607	-		Synpcc7942_2053	0.66	-1.2
2,131,621	+		Synpcc7942_2053	0.67	-1.0
2,131,654	+		Synpcc7942_2053	0.69	-0.2
2,131,654	+		Synpcc7942_2053	0.69	-0.8
2,131,654	+		Synpcc7942_2053	0.69	+1.3
2,131,654	+		Synpcc7942_2053	0.69	-1.7
2,131,656	-				+0.2
2,131,662	-		Synpcc7942_2053	0.69	-1.5
2,131,662	-		Synpcc7942_2053	0.69	-1.7
2,131,681	-		Synpcc7942_2053	0.70	+0.5
2,131,700	-		Synpcc7942_2053	0.71	-1.0
2,131,729	+		Synpcc7942_2053	0.73	-1.4
2,131,729	+		Synpcc7942_2053	0.73	-0.5
2,131,737	-		Synpcc7942_2053	0.73	-1.8
2,131,749	-		Synpcc7942_2053	0.74	-1.7
2,131,759	-		Synpcc7942_2053	0.74	-2.5
2,131,810	-		Synpcc7942_2053	0.77	-0.3
2,131,810	-		Synpcc7942_2053	0.77	-2.4
2,131,814	+		Synpcc7942_2053	0.77	-1.3
2,131,816	+		Synpcc7942_2053	0.77	+0.1
2,131,816	+		Synpcc7942_2053	0.77	-1.6
2,131,816	+		Synpcc7942_2053	0.77	-1.9
2,131,819	-		Synpcc7942_2053	0.77	+0.2
2,131,824	-		Synpcc7942_2053	0.77	-2.2
2,131,824	-		Synpcc7942_2053	0.77	-0.6
2,131,872	+		Synpcc7942_2053	0.80	-3.3
2,131,926	-		Synpcc7942_2053	0.83	-1.3
2,131,935	+		Synpcc7942_2053	0.83	-0.3
2,131,943	-		Synpcc7942_2053	0.84	-1.8
2,131,956	+		Synpcc7942_2053	0.84	+0.4
2,131,964	-		Synpcc7942_2053	0.85	-1.8
2,132,039	-		Synpcc7942_2053	0.89	-1.1
2,132,070	+				-0.7
2,132,107	+				-3.0
2,132,114	+				-3.2
2,132,132	+				-0.8
2,132,151	+				-0.9
2,132,178	+				-0.0
2,132,246	+				-0.9
2,132,247	+				-2.2
2,132,253	+				+1.0
2,132,254	-				-1.4
2,132,276	-				+3.0
2,132,314	+				+1.2
2,132,322	-				-0.4
2,132,322	-				-0.5
2,132,383	+		Synpcc7942_2054	0.13	-1.9
2,132,386	+		Synpcc7942_2054	0.14	+2.5
2,132,388	+		Synpcc7942_2054	0.14	+0.4
2,132,409	+		Synpcc7942_2054	0.16	+2.2
2,132,441	+		Synpcc7942_2054	0.20	-0.2
2,132,495	+		Synpcc7942_2054	0.25	+1.7
2,132,502	-		Synpcc7942_2054	0.26	+2.0
2,132,505	+				+0.6
2,132,505	+		Synpcc7942_2054	0.26	-1.1
2,132,513	-		Synpcc7942_2054	0.27	+4.5
2,132,513	-		Synpcc7942_2054	0.27	+1.8
2,132,513	-		Synpcc7942_2054	0.27	-1.7
2,132,528	-		Synpcc7942_2054	0.29	+0.4
2,132,565	+		Synpcc7942_2054	0.33	+2.3
2,132,603	+		Synpcc7942_2054	0.37	-1.4
2,132,612	-		Synpcc7942_2054	0.38	+1.9
2,132,615	-		Synpcc7942_2054	0.38	+0.1
2,132,699	+		Synpcc7942_2054	0.47	-1.0
2,132,704	+		Synpcc7942_2054	0.48	-0.4
2,132,727	+		Synpcc7942_2054	0.50	+0.6
2,132,729	+		Synpcc7942_2054	0.50	-0.2
2,132,735	-		Synpcc7942_2054	0.51	+2.5
2,132,737	-		Synpcc7942_2054	0.51	+0.2
2,132,745	-		Synpcc7942_2054	0.52	-2.2
2,132,748	+		Synpcc7942_2054	0.52	+1.1
2,132,778	-		Synpcc7942_2054	0.55	+1.6
2,132,792	-		Synpcc7942_2054	0.57	-1.3
2,132,809	-		Synpcc7942_2054	0.59	+2.2
2,132,811	+		Synpcc7942_2054	0.59	+1.8
2,132,811	+		Synpcc7942_2054	0.59	-1.5
2,132,811	+		Synpcc7942_2054	0.59	+1.4
2,132,819	-		Synpcc7942_2054	0.60	+1.5
2,132,821	-		Synpcc7942_2054	0.60	-0.4
2,132,842	+		Synpcc7942_2054	0.62	-0.9
2,132,855	+		Synpcc7942_2054	0.64	-1.2
2,132,861	-		Synpcc7942_2054	0.64	-1.8
2,132,901	+		Synpcc7942_2054	0.68	+1.9
2,132,910	+		Synpcc7942_2054	0.69	+1.2
2,132,910	+		Synpcc7942_2054	0.69	+0.4
2,132,925	-		Synpcc7942_2054	0.71	-0.8
2,132,930	-		Synpcc7942_2054	0.72	-0.5
2,132,931	-		Synpcc7942_2054	0.72	-3.4
2,132,939	-		Synpcc7942_2054	0.73	-1.3
2,132,946	-		Synpcc7942_2054	0.73	-1.3
2,132,973	-		Synpcc7942_2054	0.76	+2.4
2,133,035	+		Synpcc7942_2054	0.83	-2.5
2,133,043	+		Synpcc7942_2054	0.84	-0.9
2,133,043	-		Synpcc7942_2054	0.84	-0.8
2,133,051	-		Synpcc7942_2054	0.84	-0.7
2,133,063	-		Synpcc7942_2054	0.86	-1.7
2,133,071	+		Synpcc7942_2054	0.87	-0.2
2,133,071	+		Synpcc7942_2054	0.87	-0.6
2,133,071	+		Synpcc7942_2054	0.87	+0.6
2,133,079	-		Synpcc7942_2054	0.87	-1.3
2,133,079	-		Synpcc7942_2054	0.87	+1.6
2,133,087	-		Synpcc7942_2054	0.88	+0.8
2,133,115	+				-1.3
2,133,115	+				+2.6
2,133,115	+				-0.4
2,133,117	+				-1.8
2,133,125	-				+2.5
2,133,125	-				-2.6
2,133,125	-				-1.1
2,133,125	-				+1.5
2,133,125	-				-2.0
2,133,137	+				+1.0
2,133,256	-				-1.2