Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0807 and sps are separated by 171 nucleotides sps and Synpcc7942_0809 are separated by 92 nucleotides
Synpcc7942_0807: Synpcc7942_0807 - hypothetical protein, at 799,840 to 800,679
_0807
Synpcc7942_0808: sps - HAD-superfamily hydrolase subfamily IIB, at 800,851 to 802,980
sps
Synpcc7942_0809: Synpcc7942_0809 - hypothetical protein, at 803,073 to 804,815
_0809
Position (kb) 800
801
802
803 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 799.857 kb on - strand at 799.900 kb on + strand at 799.910 kb on - strand at 799.910 kb on - strand at 799.927 kb on + strand, within Synpcc7942_0807 at 799.935 kb on - strand, within Synpcc7942_0807 at 799.945 kb on - strand, within Synpcc7942_0807 at 799.957 kb on + strand, within Synpcc7942_0807 at 799.957 kb on + strand, within Synpcc7942_0807 at 799.963 kb on - strand, within Synpcc7942_0807 at 800.012 kb on + strand, within Synpcc7942_0807 at 800.087 kb on - strand, within Synpcc7942_0807 at 800.126 kb on + strand at 800.133 kb on - strand, within Synpcc7942_0807 at 800.134 kb on - strand, within Synpcc7942_0807 at 800.141 kb on + strand, within Synpcc7942_0807 at 800.149 kb on - strand, within Synpcc7942_0807 at 800.177 kb on + strand, within Synpcc7942_0807 at 800.195 kb on + strand, within Synpcc7942_0807 at 800.195 kb on + strand, within Synpcc7942_0807 at 800.220 kb on + strand, within Synpcc7942_0807 at 800.229 kb on - strand, within Synpcc7942_0807 at 800.261 kb on + strand, within Synpcc7942_0807 at 800.268 kb on + strand, within Synpcc7942_0807 at 800.269 kb on + strand, within Synpcc7942_0807 at 800.291 kb on + strand, within Synpcc7942_0807 at 800.314 kb on + strand, within Synpcc7942_0807 at 800.316 kb on + strand, within Synpcc7942_0807 at 800.339 kb on - strand, within Synpcc7942_0807 at 800.350 kb on - strand, within Synpcc7942_0807 at 800.350 kb on - strand, within Synpcc7942_0807 at 800.372 kb on - strand, within Synpcc7942_0807 at 800.372 kb on - strand, within Synpcc7942_0807 at 800.372 kb on - strand, within Synpcc7942_0807 at 800.397 kb on + strand, within Synpcc7942_0807 at 800.405 kb on - strand, within Synpcc7942_0807 at 800.429 kb on + strand, within Synpcc7942_0807 at 800.594 kb on + strand, within Synpcc7942_0807 at 800.682 kb on + strand at 800.682 kb on - strand at 800.702 kb on + strand at 800.745 kb on + strand at 800.755 kb on + strand at 800.766 kb on - strand at 800.769 kb on - strand at 800.794 kb on - strand at 800.801 kb on - strand at 800.842 kb on - strand at 800.857 kb on - strand at 800.857 kb on - strand at 800.880 kb on + strand at 800.895 kb on - strand at 800.917 kb on - strand at 800.919 kb on + strand at 800.987 kb on - strand at 801.070 kb on + strand, within sps at 801.070 kb on + strand, within sps at 801.071 kb on + strand, within sps at 801.130 kb on + strand, within sps at 801.140 kb on + strand, within sps at 801.183 kb on + strand, within sps at 801.186 kb on - strand, within sps at 801.196 kb on + strand, within sps at 801.198 kb on + strand, within sps at 801.206 kb on - strand at 801.245 kb on + strand, within sps at 801.285 kb on - strand, within sps at 801.367 kb on - strand at 801.415 kb on + strand, within sps at 801.447 kb on - strand, within sps at 801.457 kb on - strand, within sps at 801.501 kb on + strand, within sps at 801.559 kb on - strand, within sps at 801.597 kb on - strand, within sps at 801.656 kb on + strand, within sps at 801.724 kb on - strand, within sps at 801.743 kb on - strand, within sps at 801.752 kb on + strand at 801.759 kb on - strand, within sps at 801.762 kb on - strand, within sps at 801.764 kb on - strand, within sps at 801.773 kb on + strand, within sps at 801.781 kb on - strand, within sps at 801.962 kb on + strand, within sps at 801.970 kb on - strand, within sps at 801.970 kb on - strand, within sps at 801.986 kb on + strand, within sps at 801.988 kb on - strand, within sps at 801.996 kb on + strand, within sps at 802.015 kb on + strand, within sps at 802.015 kb on + strand, within sps at 802.015 kb on + strand, within sps at 802.015 kb on + strand, within sps at 802.023 kb on - strand, within sps at 802.023 kb on - strand, within sps at 802.023 kb on - strand, within sps at 802.023 kb on - strand, within sps at 802.089 kb on - strand, within sps at 802.090 kb on - strand, within sps at 802.110 kb on + strand at 802.116 kb on + strand, within sps at 802.118 kb on - strand, within sps at 802.118 kb on - strand, within sps at 802.119 kb on - strand, within sps at 802.140 kb on + strand, within sps at 802.148 kb on - strand, within sps at 802.149 kb on - strand, within sps at 802.173 kb on - strand, within sps at 802.191 kb on - strand, within sps at 802.246 kb on + strand, within sps at 802.247 kb on - strand, within sps at 802.254 kb on - strand, within sps at 802.254 kb on - strand, within sps at 802.328 kb on - strand, within sps at 802.331 kb on + strand, within sps at 802.331 kb on + strand, within sps at 802.338 kb on + strand, within sps at 802.343 kb on + strand, within sps at 802.346 kb on - strand, within sps at 802.351 kb on - strand, within sps at 802.391 kb on + strand, within sps at 802.412 kb on + strand, within sps at 802.412 kb on + strand, within sps at 802.420 kb on - strand at 802.430 kb on - strand, within sps at 802.455 kb on - strand, within sps at 802.553 kb on + strand, within sps at 802.575 kb on - strand, within sps at 802.580 kb on - strand, within sps at 802.580 kb on - strand, within sps at 802.593 kb on + strand, within sps at 802.598 kb on + strand, within sps at 802.598 kb on + strand, within sps at 802.604 kb on - strand, within sps at 802.616 kb on - strand, within sps at 802.662 kb on + strand, within sps at 802.669 kb on + strand, within sps at 802.670 kb on + strand at 802.670 kb on + strand, within sps at 802.671 kb on - strand, within sps at 802.677 kb on - strand, within sps at 802.677 kb on - strand, within sps at 802.687 kb on + strand, within sps at 802.690 kb on - strand, within sps at 802.695 kb on - strand, within sps at 802.697 kb on + strand, within sps at 802.712 kb on - strand, within sps at 802.749 kb on + strand, within sps at 802.756 kb on + strand, within sps at 802.772 kb on + strand at 802.784 kb on - strand at 802.784 kb on - strand at 802.802 kb on - strand at 802.841 kb on + strand at 802.847 kb on + strand at 802.857 kb on + strand at 802.861 kb on - strand at 802.861 kb on - strand at 802.863 kb on + strand at 802.871 kb on - strand at 802.871 kb on - strand at 802.873 kb on - strand at 802.878 kb on - strand at 802.882 kb on - strand at 802.882 kb on - strand at 802.919 kb on - strand at 802.937 kb on + strand at 802.940 kb on - strand at 802.981 kb on + strand at 802.992 kb on - strand at 803.010 kb on + strand at 803.017 kb on - strand at 803.053 kb on - strand at 803.056 kb on + strand at 803.067 kb on + strand at 803.121 kb on - strand at 803.131 kb on + strand at 803.139 kb on - strand at 803.144 kb on + strand at 803.162 kb on - strand at 803.170 kb on + strand at 803.175 kb on + strand at 803.193 kb on + strand at 803.203 kb on + strand at 803.203 kb on + strand at 803.211 kb on - strand at 803.213 kb on + strand at 803.216 kb on + strand at 803.216 kb on + strand at 803.234 kb on - strand at 803.260 kb on + strand, within Synpcc7942_0809 at 803.260 kb on + strand, within Synpcc7942_0809 at 803.260 kb on + strand, within Synpcc7942_0809 at 803.268 kb on - strand, within Synpcc7942_0809 at 803.278 kb on - strand, within Synpcc7942_0809 at 803.283 kb on + strand at 803.289 kb on + strand, within Synpcc7942_0809 at 803.289 kb on + strand, within Synpcc7942_0809 at 803.289 kb on + strand, within Synpcc7942_0809 at 803.289 kb on + strand, within Synpcc7942_0809 at 803.297 kb on - strand, within Synpcc7942_0809 at 803.297 kb on - strand, within Synpcc7942_0809 at 803.297 kb on - strand, within Synpcc7942_0809 at 803.326 kb on - strand, within Synpcc7942_0809 at 803.362 kb on - strand, within Synpcc7942_0809 at 803.381 kb on + strand, within Synpcc7942_0809 at 803.384 kb on - strand, within Synpcc7942_0809 at 803.394 kb on - strand, within Synpcc7942_0809 at 803.410 kb on - strand, within Synpcc7942_0809 at 803.429 kb on + strand, within Synpcc7942_0809 at 803.448 kb on + strand, within Synpcc7942_0809 at 803.450 kb on - strand, within Synpcc7942_0809 at 803.483 kb on + strand, within Synpcc7942_0809 at 803.519 kb on - strand, within Synpcc7942_0809 at 803.519 kb on - strand, within Synpcc7942_0809 at 803.552 kb on - strand, within Synpcc7942_0809 at 803.569 kb on - strand, within Synpcc7942_0809 at 803.595 kb on - strand, within Synpcc7942_0809 at 803.595 kb on - strand, within Synpcc7942_0809 at 803.614 kb on + strand, within Synpcc7942_0809 at 803.621 kb on - strand, within Synpcc7942_0809 at 803.621 kb on - strand, within Synpcc7942_0809 at 803.633 kb on - strand, within Synpcc7942_0809 at 803.639 kb on + strand, within Synpcc7942_0809 at 803.677 kb on - strand, within Synpcc7942_0809 at 803.719 kb on + strand, within Synpcc7942_0809 at 803.731 kb on + strand, within Synpcc7942_0809 at 803.782 kb on + strand, within Synpcc7942_0809 at 803.792 kb on - strand, within Synpcc7942_0809 at 803.858 kb on - strand, within Synpcc7942_0809 at 803.858 kb on - strand, within Synpcc7942_0809 at 803.863 kb on - strand, within Synpcc7942_0809 at 803.880 kb on - strand, within Synpcc7942_0809
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 799,857 - +1.7 799,900 + -1.3 799,910 - -1.0 799,910 - +2.5 799,927 + Synpcc7942_0807 0.10 -2.3 799,935 - Synpcc7942_0807 0.11 +0.0 799,945 - Synpcc7942_0807 0.12 -1.2 799,957 + Synpcc7942_0807 0.14 -1.1 799,957 + Synpcc7942_0807 0.14 +1.5 799,963 - Synpcc7942_0807 0.15 +0.2 800,012 + Synpcc7942_0807 0.20 -0.8 800,087 - Synpcc7942_0807 0.29 +2.1 800,126 + +0.4 800,133 - Synpcc7942_0807 0.35 -0.8 800,134 - Synpcc7942_0807 0.35 -1.7 800,141 + Synpcc7942_0807 0.36 -2.4 800,149 - Synpcc7942_0807 0.37 -1.1 800,177 + Synpcc7942_0807 0.40 -1.0 800,195 + Synpcc7942_0807 0.42 +1.8 800,195 + Synpcc7942_0807 0.42 +0.1 800,220 + Synpcc7942_0807 0.45 -2.0 800,229 - Synpcc7942_0807 0.46 +0.1 800,261 + Synpcc7942_0807 0.50 -1.0 800,268 + Synpcc7942_0807 0.51 +0.1 800,269 + Synpcc7942_0807 0.51 +0.3 800,291 + Synpcc7942_0807 0.54 -0.9 800,314 + Synpcc7942_0807 0.56 +2.2 800,316 + Synpcc7942_0807 0.57 -1.0 800,339 - Synpcc7942_0807 0.59 +1.2 800,350 - Synpcc7942_0807 0.61 -0.6 800,350 - Synpcc7942_0807 0.61 +2.3 800,372 - Synpcc7942_0807 0.63 -2.1 800,372 - Synpcc7942_0807 0.63 +2.1 800,372 - Synpcc7942_0807 0.63 -0.5 800,397 + Synpcc7942_0807 0.66 -1.6 800,405 - Synpcc7942_0807 0.67 -0.1 800,429 + Synpcc7942_0807 0.70 +1.9 800,594 + Synpcc7942_0807 0.90 +2.4 800,682 + -0.4 800,682 - -1.9 800,702 + -0.1 800,745 + -1.6 800,755 + -0.6 800,766 - +0.7 800,769 - +0.2 800,794 - -0.4 800,801 - -2.1 800,842 - -0.1 800,857 - -1.5 800,857 - +1.6 800,880 + -0.9 800,895 - +0.1 800,917 - +1.4 800,919 + -0.7 800,987 - +0.1 801,070 + sps Synpcc7942_0808 0.10 +1.9 801,070 + sps Synpcc7942_0808 0.10 +1.9 801,071 + sps Synpcc7942_0808 0.10 +1.9 801,130 + sps Synpcc7942_0808 0.13 -0.2 801,140 + sps Synpcc7942_0808 0.14 +2.9 801,183 + sps Synpcc7942_0808 0.16 +0.1 801,186 - sps Synpcc7942_0808 0.16 +0.5 801,196 + sps Synpcc7942_0808 0.16 +1.6 801,198 + sps Synpcc7942_0808 0.16 +0.8 801,206 - +0.9 801,245 + sps Synpcc7942_0808 0.18 -0.5 801,285 - sps Synpcc7942_0808 0.20 +2.1 801,367 - +0.6 801,415 + sps Synpcc7942_0808 0.26 -0.6 801,447 - sps Synpcc7942_0808 0.28 +1.9 801,457 - sps Synpcc7942_0808 0.28 +2.9 801,501 + sps Synpcc7942_0808 0.31 -0.1 801,559 - sps Synpcc7942_0808 0.33 -0.8 801,597 - sps Synpcc7942_0808 0.35 +0.8 801,656 + sps Synpcc7942_0808 0.38 +0.5 801,724 - sps Synpcc7942_0808 0.41 -1.4 801,743 - sps Synpcc7942_0808 0.42 -1.0 801,752 + +0.6 801,759 - sps Synpcc7942_0808 0.43 -1.5 801,762 - sps Synpcc7942_0808 0.43 -0.3 801,764 - sps Synpcc7942_0808 0.43 +1.9 801,773 + sps Synpcc7942_0808 0.43 +0.0 801,781 - sps Synpcc7942_0808 0.44 -1.2 801,962 + sps Synpcc7942_0808 0.52 -0.1 801,970 - sps Synpcc7942_0808 0.53 +1.1 801,970 - sps Synpcc7942_0808 0.53 -1.5 801,986 + sps Synpcc7942_0808 0.53 -0.6 801,988 - sps Synpcc7942_0808 0.53 -0.4 801,996 + sps Synpcc7942_0808 0.54 +2.1 802,015 + sps Synpcc7942_0808 0.55 -0.1 802,015 + sps Synpcc7942_0808 0.55 +0.2 802,015 + sps Synpcc7942_0808 0.55 -0.5 802,015 + sps Synpcc7942_0808 0.55 -0.8 802,023 - sps Synpcc7942_0808 0.55 -0.6 802,023 - sps Synpcc7942_0808 0.55 +2.0 802,023 - sps Synpcc7942_0808 0.55 -0.9 802,023 - sps Synpcc7942_0808 0.55 -0.9 802,089 - sps Synpcc7942_0808 0.58 +0.0 802,090 - sps Synpcc7942_0808 0.58 -0.0 802,110 + +0.4 802,116 + sps Synpcc7942_0808 0.59 -0.3 802,118 - sps Synpcc7942_0808 0.59 -0.7 802,118 - sps Synpcc7942_0808 0.59 -0.5 802,119 - sps Synpcc7942_0808 0.60 +2.0 802,140 + sps Synpcc7942_0808 0.61 +1.2 802,148 - sps Synpcc7942_0808 0.61 -1.4 802,149 - sps Synpcc7942_0808 0.61 -1.3 802,173 - sps Synpcc7942_0808 0.62 -0.9 802,191 - sps Synpcc7942_0808 0.63 +2.0 802,246 + sps Synpcc7942_0808 0.65 -0.8 802,247 - sps Synpcc7942_0808 0.66 -1.1 802,254 - sps Synpcc7942_0808 0.66 -0.0 802,254 - sps Synpcc7942_0808 0.66 -0.5 802,328 - sps Synpcc7942_0808 0.69 -0.8 802,331 + sps Synpcc7942_0808 0.69 +0.1 802,331 + sps Synpcc7942_0808 0.69 -1.4 802,338 + sps Synpcc7942_0808 0.70 -1.4 802,343 + sps Synpcc7942_0808 0.70 -1.3 802,346 - sps Synpcc7942_0808 0.70 -0.4 802,351 - sps Synpcc7942_0808 0.70 -1.1 802,391 + sps Synpcc7942_0808 0.72 -0.5 802,412 + sps Synpcc7942_0808 0.73 -2.3 802,412 + sps Synpcc7942_0808 0.73 +2.8 802,420 - +0.6 802,430 - sps Synpcc7942_0808 0.74 -0.5 802,455 - sps Synpcc7942_0808 0.75 +0.8 802,553 + sps Synpcc7942_0808 0.80 -1.2 802,575 - sps Synpcc7942_0808 0.81 -1.1 802,580 - sps Synpcc7942_0808 0.81 -1.5 802,580 - sps Synpcc7942_0808 0.81 -0.0 802,593 + sps Synpcc7942_0808 0.82 +1.1 802,598 + sps Synpcc7942_0808 0.82 -1.1 802,598 + sps Synpcc7942_0808 0.82 -1.4 802,604 - sps Synpcc7942_0808 0.82 -0.5 802,616 - sps Synpcc7942_0808 0.83 +2.5 802,662 + sps Synpcc7942_0808 0.85 +2.1 802,669 + sps Synpcc7942_0808 0.85 -0.5 802,670 + -0.4 802,670 + sps Synpcc7942_0808 0.85 +0.2 802,671 - sps Synpcc7942_0808 0.85 -2.5 802,677 - sps Synpcc7942_0808 0.86 -1.5 802,677 - sps Synpcc7942_0808 0.86 -2.4 802,687 + sps Synpcc7942_0808 0.86 -1.1 802,690 - sps Synpcc7942_0808 0.86 -0.6 802,695 - sps Synpcc7942_0808 0.87 -2.1 802,697 + sps Synpcc7942_0808 0.87 -0.2 802,712 - sps Synpcc7942_0808 0.87 +0.8 802,749 + sps Synpcc7942_0808 0.89 -0.3 802,756 + sps Synpcc7942_0808 0.89 +1.9 802,772 + +2.2 802,784 - +0.9 802,784 - -1.5 802,802 - -0.1 802,841 + +2.0 802,847 + -1.5 802,857 + -3.3 802,861 - -1.2 802,861 - -0.1 802,863 + -0.5 802,871 - +1.8 802,871 - -0.9 802,873 - +1.1 802,878 - -0.9 802,882 - -1.8 802,882 - -0.3 802,919 - +0.7 802,937 + -0.5 802,940 - +0.5 802,981 + -1.0 802,992 - +0.6 803,010 + +2.3 803,017 - -2.3 803,053 - +0.1 803,056 + -0.1 803,067 + +1.7 803,121 - -0.9 803,131 + -0.1 803,139 - -2.2 803,144 + -1.1 803,162 - -1.6 803,170 + -1.0 803,175 + +0.6 803,193 + -1.8 803,203 + -3.0 803,203 + -2.6 803,211 - -3.1 803,213 + -0.7 803,216 + -2.0 803,216 + -2.2 803,234 - -1.4 803,260 + Synpcc7942_0809 0.11 -2.2 803,260 + Synpcc7942_0809 0.11 +0.1 803,260 + Synpcc7942_0809 0.11 -1.9 803,268 - Synpcc7942_0809 0.11 -0.2 803,278 - Synpcc7942_0809 0.12 -3.0 803,283 + +0.4 803,289 + Synpcc7942_0809 0.12 -2.3 803,289 + Synpcc7942_0809 0.12 +0.2 803,289 + Synpcc7942_0809 0.12 -1.2 803,289 + Synpcc7942_0809 0.12 -2.2 803,297 - Synpcc7942_0809 0.13 -2.0 803,297 - Synpcc7942_0809 0.13 -1.8 803,297 - Synpcc7942_0809 0.13 -0.9 803,326 - Synpcc7942_0809 0.15 -1.7 803,362 - Synpcc7942_0809 0.17 -1.6 803,381 + Synpcc7942_0809 0.18 -1.9 803,384 - Synpcc7942_0809 0.18 -2.0 803,394 - Synpcc7942_0809 0.18 -0.7 803,410 - Synpcc7942_0809 0.19 -1.1 803,429 + Synpcc7942_0809 0.20 -2.6 803,448 + Synpcc7942_0809 0.22 -1.1 803,450 - Synpcc7942_0809 0.22 +0.1 803,483 + Synpcc7942_0809 0.24 -2.7 803,519 - Synpcc7942_0809 0.26 -4.1 803,519 - Synpcc7942_0809 0.26 -0.6 803,552 - Synpcc7942_0809 0.27 +0.4 803,569 - Synpcc7942_0809 0.28 -2.9 803,595 - Synpcc7942_0809 0.30 -1.9 803,595 - Synpcc7942_0809 0.30 -1.4 803,614 + Synpcc7942_0809 0.31 -2.2 803,621 - Synpcc7942_0809 0.31 -0.6 803,621 - Synpcc7942_0809 0.31 -0.9 803,633 - Synpcc7942_0809 0.32 -0.3 803,639 + Synpcc7942_0809 0.32 -1.9 803,677 - Synpcc7942_0809 0.35 -0.3 803,719 + Synpcc7942_0809 0.37 -0.5 803,731 + Synpcc7942_0809 0.38 -1.6 803,782 + Synpcc7942_0809 0.41 -1.7 803,792 - Synpcc7942_0809 0.41 -0.3 803,858 - Synpcc7942_0809 0.45 -2.8 803,858 - Synpcc7942_0809 0.45 -1.5 803,863 - Synpcc7942_0809 0.45 -1.5 803,880 - Synpcc7942_0809 0.46 -1.6
Or see this region's nucleotide sequence