Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3953

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
4,593,304	+		Pf6N2E2_3952	0.27	-0.2
4,593,305	-		Pf6N2E2_3952	0.27	+0.2
4,593,305	-		Pf6N2E2_3952	0.27	-0.6
4,593,580	+		Pf6N2E2_3952	0.51	+2.1
4,593,580	+		Pf6N2E2_3952	0.51	+1.0
4,593,580	+		Pf6N2E2_3952	0.51	+0.0
4,593,580	+		Pf6N2E2_3952	0.51	+1.0
4,593,581	-		Pf6N2E2_3952	0.51	+0.9
4,593,581	-		Pf6N2E2_3952	0.51	+0.5
4,593,581	-		Pf6N2E2_3952	0.51	-0.6
4,593,581	-		Pf6N2E2_3952	0.51	+0.9
4,593,581	-		Pf6N2E2_3952	0.51	+0.5
4,593,863	-		Pf6N2E2_3952	0.75	-0.3
4,593,869	+		Pf6N2E2_3952	0.76	-0.8
4,594,195	+				-0.3
4,594,196	-				+0.4
4,594,227	-				+0.8
4,594,227	-				+0.3
4,594,300	+				+0.2
4,594,300	+				+0.3
4,594,300	+				+1.4
4,594,300	+				+0.2
4,594,301	-				+0.3
4,594,301	-				-0.4
4,594,408	+		Pf6N2E2_3953	0.17	+0.3
4,594,409	-		Pf6N2E2_3953	0.17	-0.2
4,594,409	-		Pf6N2E2_3953	0.17	-1.0
4,594,409	-		Pf6N2E2_3953	0.17	+0.4
4,594,409	-		Pf6N2E2_3953	0.17	+0.1
4,594,431	+		Pf6N2E2_3953	0.20	+0.7
4,594,454	+		Pf6N2E2_3953	0.23	-1.1
4,594,455	-		Pf6N2E2_3953	0.23	-0.5
4,594,474	+		Pf6N2E2_3953	0.26	-1.1
4,594,474	+		Pf6N2E2_3953	0.26	+0.6
4,594,474	+		Pf6N2E2_3953	0.26	+0.6
4,594,474	+		Pf6N2E2_3953	0.26	+0.5
4,594,474	+		Pf6N2E2_3953	0.26	+0.3
4,594,474	+		Pf6N2E2_3953	0.26	+0.8
4,594,475	-		Pf6N2E2_3953	0.26	-0.3
4,594,475	-		Pf6N2E2_3953	0.26	-0.6
4,594,475	-		Pf6N2E2_3953	0.26	-0.5
4,594,475	-		Pf6N2E2_3953	0.26	-0.3
4,594,475	-		Pf6N2E2_3953	0.26	+0.1
4,594,475	-		Pf6N2E2_3953	0.26	-0.3
4,594,475	-		Pf6N2E2_3953	0.26	-1.3
4,594,475	-		Pf6N2E2_3953	0.26	-0.3
4,594,475	-		Pf6N2E2_3953	0.26	+0.7
4,594,475	-		Pf6N2E2_3953	0.26	+0.3
4,594,475	-		Pf6N2E2_3953	0.26	+0.5
4,594,475	-		Pf6N2E2_3953	0.26	-0.5
4,594,475	-		Pf6N2E2_3953	0.26	-0.9
4,594,575	-		Pf6N2E2_3953	0.39	-0.4
4,594,720	+		Pf6N2E2_3953	0.57	-1.7
4,594,810	+		Pf6N2E2_3953	0.69	-1.4
4,594,811	-		Pf6N2E2_3953	0.69	+0.0
4,594,828	+		Pf6N2E2_3953	0.71	+0.5
4,594,828	+		Pf6N2E2_3953	0.71	+1.2
4,594,828	+		Pf6N2E2_3953	0.71	-1.5
4,594,829	-		Pf6N2E2_3953	0.71	+0.3
4,594,829	-		Pf6N2E2_3953	0.71	+0.0
4,594,829	-		Pf6N2E2_3953	0.71	+0.1
4,594,829	-		Pf6N2E2_3953	0.71	-0.1
4,594,829	-		Pf6N2E2_3953	0.71	+0.1
4,594,829	-		Pf6N2E2_3953	0.71	+0.2
4,594,829	-		Pf6N2E2_3953	0.71	-0.7
4,594,860	+		Pf6N2E2_3953	0.75	-1.0
4,594,860	+		Pf6N2E2_3953	0.75	+0.7
4,594,860	+		Pf6N2E2_3953	0.75	-1.3
4,594,860	+		Pf6N2E2_3953	0.75	+0.7
4,594,860	+		Pf6N2E2_3953	0.75	-0.4
4,594,861	-		Pf6N2E2_3953	0.75	-0.7
4,594,861	-		Pf6N2E2_3953	0.75	-1.1
4,594,877	-		Pf6N2E2_3953	0.77	+1.2
4,595,208	-				-0.7
4,595,208	-				+0.4
4,595,336	+				-0.7
4,595,337	-				+0.7
4,595,337	-				+0.6
4,595,337	-				+0.7
4,595,337	-				-0.3
4,595,337	-				-0.0
4,595,337	-				+0.3
4,595,337	-				+0.3
4,595,337	-				+0.0
4,595,337	-				-0.1
4,595,337	-				-0.0
4,595,337	-				+0.3
4,595,621	+		Pf6N2E2_3954	0.31	+0.1
4,595,621	+		Pf6N2E2_3954	0.31	+0.4
4,595,621	+		Pf6N2E2_3954	0.31	-0.0
4,595,621	+		Pf6N2E2_3954	0.31	+0.3
4,595,621	+		Pf6N2E2_3954	0.31	-0.1
4,595,622	-		Pf6N2E2_3954	0.31	-0.3
4,595,622	-		Pf6N2E2_3954	0.31	+0.9
4,595,708	+		Pf6N2E2_3954	0.40	-0.7
4,595,708	+		Pf6N2E2_3954	0.40	+1.0
4,595,708	+		Pf6N2E2_3954	0.40	+0.8
4,595,708	+		Pf6N2E2_3954	0.40	-0.3
4,595,709	-		Pf6N2E2_3954	0.40	+0.4
4,595,709	-		Pf6N2E2_3954	0.40	+1.4
4,595,709	-		Pf6N2E2_3954	0.40	+0.3
4,595,709	-		Pf6N2E2_3954	0.40	+0.3
4,595,714	+		Pf6N2E2_3954	0.40	+1.1
4,595,791	+		Pf6N2E2_3954	0.49	-0.6
4,595,792	-		Pf6N2E2_3954	0.49	-0.2
4,595,958	-		Pf6N2E2_3954	0.67	+0.2
4,595,958	-		Pf6N2E2_3954	0.67	-0.5
4,595,958	-		Pf6N2E2_3954	0.67	+0.0
4,595,997	-		Pf6N2E2_3954	0.71	-1.1