Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3404

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
3,948,039	+		Pf6N2E2_3403	0.32	-1.0
3,948,040	-		Pf6N2E2_3403	0.32	+0.0
3,948,056	-		Pf6N2E2_3403	0.33	-0.7
3,948,056	-		Pf6N2E2_3403	0.33	+0.0
3,948,156	+		Pf6N2E2_3403	0.40	-2.7
3,948,156	+		Pf6N2E2_3403	0.40	+0.4
3,948,157	-		Pf6N2E2_3403	0.40	+1.3
3,948,157	-		Pf6N2E2_3403	0.40	+1.0
3,948,157	-		Pf6N2E2_3403	0.40	+0.3
3,948,157	-		Pf6N2E2_3403	0.40	+0.4
3,948,157	-		Pf6N2E2_3403	0.40	+0.8
3,948,168	-		Pf6N2E2_3403	0.41	+0.9
3,948,168	-		Pf6N2E2_3403	0.41	-0.0
3,948,215	-		Pf6N2E2_3403	0.44	+0.0
3,948,215	-		Pf6N2E2_3403	0.44	-0.0
3,948,347	-		Pf6N2E2_3403	0.53	+0.8
3,948,554	+		Pf6N2E2_3403	0.68	+0.9
3,948,554	+		Pf6N2E2_3403	0.68	+0.1
3,948,554	+		Pf6N2E2_3403	0.68	-0.9
3,948,554	+		Pf6N2E2_3403	0.68	+1.3
3,948,554	+		Pf6N2E2_3403	0.68	-0.1
3,948,554	+		Pf6N2E2_3403	0.68	+0.0
3,948,554	+		Pf6N2E2_3403	0.68	+0.1
3,948,555	-		Pf6N2E2_3403	0.68	-0.9
3,948,555	-		Pf6N2E2_3403	0.68	+0.8
3,948,555	-		Pf6N2E2_3403	0.68	-1.2
3,948,555	-		Pf6N2E2_3403	0.68	+0.5
3,948,873	+				+0.5
3,948,873	+				+0.3
3,948,873	+				+0.5
3,948,873	+				+0.3
3,948,873	+				+0.1
3,948,874	-				-0.3
3,948,874	-				+0.5
3,948,979	+				+1.2
3,948,979	+				+0.1
3,948,980	-				-0.0
3,948,980	-				+0.6
3,949,102	+		Pf6N2E2_3404	0.12	+0.8
3,949,103	-		Pf6N2E2_3404	0.13	-1.2
3,949,103	-		Pf6N2E2_3404	0.13	-0.2
3,949,103	-		Pf6N2E2_3404	0.13	+1.0
3,949,103	-		Pf6N2E2_3404	0.13	+0.2
3,949,103	-		Pf6N2E2_3404	0.13	+1.1
3,949,127	+		Pf6N2E2_3404	0.16	+0.4
3,949,127	+		Pf6N2E2_3404	0.16	-0.3
3,949,127	+		Pf6N2E2_3404	0.16	-0.5
3,949,128	-		Pf6N2E2_3404	0.16	-0.2
3,949,128	-		Pf6N2E2_3404	0.16	-0.5
3,949,231	+		Pf6N2E2_3404	0.31	+0.4
3,949,231	+		Pf6N2E2_3404	0.31	+0.6
3,949,231	+		Pf6N2E2_3404	0.31	+0.2
3,949,231	+		Pf6N2E2_3404	0.31	+0.7
3,949,232	-		Pf6N2E2_3404	0.31	-0.7
3,949,232	-		Pf6N2E2_3404	0.31	+0.1
3,949,232	-		Pf6N2E2_3404	0.31	+1.3
3,949,232	-		Pf6N2E2_3404	0.31	-0.2
3,949,384	+		Pf6N2E2_3404	0.54	-0.4
3,949,384	+		Pf6N2E2_3404	0.54	-1.5
3,949,384	+		Pf6N2E2_3404	0.54	-0.1
3,949,385	-		Pf6N2E2_3404	0.54	-1.5
3,949,385	-		Pf6N2E2_3404	0.54	-1.0
3,949,669	+				-0.8
3,949,767	+		Pf6N2E2_3405	0.11	+0.6
3,949,767	+		Pf6N2E2_3405	0.11	-1.7
3,949,767	+		Pf6N2E2_3405	0.11	+0.2
3,949,767	+		Pf6N2E2_3405	0.11	+0.2
3,949,768	-		Pf6N2E2_3405	0.11	-0.2
3,949,768	-		Pf6N2E2_3405	0.11	+0.6
3,949,768	-		Pf6N2E2_3405	0.11	+0.3
3,949,768	-		Pf6N2E2_3405	0.11	-0.3
3,949,768	-		Pf6N2E2_3405	0.11	-0.3
3,949,788	+		Pf6N2E2_3405	0.14	+0.1
3,949,788	+		Pf6N2E2_3405	0.14	-0.6
3,949,788	+		Pf6N2E2_3405	0.14	-0.9
3,949,788	+		Pf6N2E2_3405	0.14	+0.4
3,949,788	+		Pf6N2E2_3405	0.14	+0.3
3,949,789	-		Pf6N2E2_3405	0.14	+0.3
3,949,789	-		Pf6N2E2_3405	0.14	-0.1
3,949,789	-		Pf6N2E2_3405	0.14	-0.6
3,949,899	+		Pf6N2E2_3405	0.31	+0.0
3,949,899	+		Pf6N2E2_3405	0.31	+0.5
3,949,899	+		Pf6N2E2_3405	0.31	-0.2
3,949,899	+		Pf6N2E2_3405	0.31	-0.2
3,949,899	+		Pf6N2E2_3405	0.31	+0.5
3,949,900	-		Pf6N2E2_3405	0.31	+0.2
3,949,900	-		Pf6N2E2_3405	0.31	-1.0
3,949,900	-		Pf6N2E2_3405	0.31	+0.1
3,949,900	-		Pf6N2E2_3405	0.31	+1.3
3,949,950	+		Pf6N2E2_3405	0.39	-1.4
3,949,950	+		Pf6N2E2_3405	0.39	-0.2
3,949,950	+		Pf6N2E2_3405	0.39	-1.5
3,949,951	-		Pf6N2E2_3405	0.39	-0.1
3,949,966	+		Pf6N2E2_3405	0.41	+0.3
3,949,966	+		Pf6N2E2_3405	0.41	-0.7
3,950,039	-		Pf6N2E2_3405	0.52	+0.9
3,950,131	-		Pf6N2E2_3405	0.66	-0.1
3,950,131	-		Pf6N2E2_3405	0.66	-0.0
3,950,201	+		Pf6N2E2_3405	0.77	-0.8
3,950,201	+		Pf6N2E2_3405	0.77	+0.6
3,950,229	-		Pf6N2E2_3405	0.81	-0.8
3,950,267	+		Pf6N2E2_3405	0.87	-0.6
3,950,267	+		Pf6N2E2_3405	0.87	-0.2
3,950,268	-		Pf6N2E2_3405	0.87	+0.8
3,950,268	-		Pf6N2E2_3405	0.87	+0.2