Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2533

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,991,081	-		Pf6N2E2_2531	0.80	+0.5
2,991,186	-		Pf6N2E2_2531	0.86	+0.8
2,991,286	+				-0.1
2,991,287	-				-0.2
2,991,357	+				-1.1
2,991,423	+				+0.7
2,991,423	+				-0.8
2,991,423	+				-0.6
2,991,423	+				+0.3
2,991,423	+				+1.3
2,991,423	+				+0.1
2,991,423	+				+0.8
2,991,424	-				-0.1
2,991,424	-				+1.2
2,991,424	-				-0.2
2,991,424	-				+0.1
2,991,717	+		Pf6N2E2_2532	0.44	-0.2
2,991,717	+		Pf6N2E2_2532	0.44	-0.6
2,991,717	+		Pf6N2E2_2532	0.44	-0.5
2,991,718	-		Pf6N2E2_2532	0.44	-0.7
2,991,718	-		Pf6N2E2_2532	0.44	-0.5
2,991,814	-		Pf6N2E2_2532	0.59	+0.6
2,991,897	+		Pf6N2E2_2532	0.72	-1.3
2,991,897	+		Pf6N2E2_2532	0.72	+0.6
2,991,898	-		Pf6N2E2_2532	0.72	-0.3
2,991,992	+		Pf6N2E2_2532	0.87	-0.3
2,991,993	-		Pf6N2E2_2532	0.87	-0.1
2,992,053	+				+0.4
2,992,053	+				+0.1
2,992,053	+				+0.2
2,992,053	+				-0.6
2,992,053	+				+0.2
2,992,054	-				-1.5
2,992,054	-				+0.9
2,992,101	+				-0.3
2,992,101	+				-0.8
2,992,101	+				+0.7
2,992,102	-				-1.3
2,992,102	-				+0.5
2,992,102	-				-0.3
2,992,102	-				-0.2
2,992,233	+		Pf6N2E2_2533	0.17	+0.6
2,992,233	+		Pf6N2E2_2533	0.17	-0.7
2,992,233	+		Pf6N2E2_2533	0.17	-2.1
2,992,233	+		Pf6N2E2_2533	0.17	-0.4
2,992,233	+		Pf6N2E2_2533	0.17	+1.3
2,992,234	-		Pf6N2E2_2533	0.17	+0.0
2,992,234	-		Pf6N2E2_2533	0.17	-1.5
2,992,234	-		Pf6N2E2_2533	0.17	+0.3
2,992,234	-		Pf6N2E2_2533	0.17	-0.8
2,992,234	-		Pf6N2E2_2533	0.17	-0.2
2,992,234	-		Pf6N2E2_2533	0.17	-1.7
2,992,234	-		Pf6N2E2_2533	0.17	-0.8
2,992,234	-		Pf6N2E2_2533	0.17	+0.1
2,992,256	+		Pf6N2E2_2533	0.19	-2.1
2,992,256	+		Pf6N2E2_2533	0.19	+0.1
2,992,257	-		Pf6N2E2_2533	0.19	-1.1
2,992,257	-		Pf6N2E2_2533	0.19	-0.9
2,992,257	-		Pf6N2E2_2533	0.19	-0.2
2,992,257	-		Pf6N2E2_2533	0.19	-1.2
2,992,257	-		Pf6N2E2_2533	0.19	-0.2
2,992,270	+		Pf6N2E2_2533	0.21	-3.1
2,992,294	-		Pf6N2E2_2533	0.23	+0.1
2,992,294	-		Pf6N2E2_2533	0.23	+0.2
2,992,294	-		Pf6N2E2_2533	0.23	-0.3
2,992,419	+		Pf6N2E2_2533	0.36	+1.1
2,992,419	+		Pf6N2E2_2533	0.36	-1.7
2,992,420	-		Pf6N2E2_2533	0.37	-0.8
2,992,420	-		Pf6N2E2_2533	0.37	+0.8
2,992,420	-		Pf6N2E2_2533	0.37	-3.5
2,992,449	+		Pf6N2E2_2533	0.40	-0.5
2,992,449	+		Pf6N2E2_2533	0.40	-0.8
2,992,449	+		Pf6N2E2_2533	0.40	-0.8
2,992,450	-		Pf6N2E2_2533	0.40	+0.3
2,992,450	-		Pf6N2E2_2533	0.40	-0.6
2,992,450	-		Pf6N2E2_2533	0.40	-2.3
2,992,450	-		Pf6N2E2_2533	0.40	+0.6
2,992,450	-		Pf6N2E2_2533	0.40	-0.6
2,992,450	-		Pf6N2E2_2533	0.40	-2.4
2,992,537	-		Pf6N2E2_2533	0.49	-0.5
2,992,680	+		Pf6N2E2_2533	0.64	+0.4
2,992,680	+		Pf6N2E2_2533	0.64	-3.4
2,992,681	-		Pf6N2E2_2533	0.64	-1.9
2,992,681	-		Pf6N2E2_2533	0.64	-0.7
2,992,681	-		Pf6N2E2_2533	0.64	-0.7
2,992,681	-		Pf6N2E2_2533	0.64	-0.7
2,992,681	-		Pf6N2E2_2533	0.64	-1.1
2,992,681	-		Pf6N2E2_2533	0.64	-0.2
2,992,681	-		Pf6N2E2_2533	0.64	-1.5
2,992,681	-		Pf6N2E2_2533	0.64	-0.6
2,992,681	-		Pf6N2E2_2533	0.64	-2.0
2,992,681	-		Pf6N2E2_2533	0.64	-2.3
2,992,700	-		Pf6N2E2_2533	0.66	-0.4
2,992,761	+		Pf6N2E2_2533	0.73	-1.7
2,992,762	-		Pf6N2E2_2533	0.73	-0.3
2,992,782	+		Pf6N2E2_2533	0.75	-1.1
2,992,962	+				-0.7
2,992,963	-				-1.1
2,992,984	+				-1.2
2,992,984	+				-0.6
2,992,984	+				-1.6
2,992,984	+				-0.6
2,992,985	-				-1.6
2,992,985	-				-0.1
2,992,985	-				+0.3
2,992,985	-				-1.5
2,992,985	-				-0.5
2,992,986	+				+0.1
2,992,986	+				-2.0
2,992,986	+				-2.3
2,992,986	+				-0.8
2,992,986	+				+0.2
2,992,987	-				-1.3
2,993,046	-				-0.4
2,993,046	-				-0.6
2,993,046	-				-0.3
2,993,103	+				+0.5
2,993,124	-				-0.3
2,993,124	-				+0.5
2,993,124	-				+0.2
2,993,124	-				-0.8
2,993,359	+		Pf6N2E2_2534	0.24	+0.4
2,993,360	-		Pf6N2E2_2534	0.25	-1.1
2,993,360	-		Pf6N2E2_2534	0.25	-0.4
2,993,413	+		Pf6N2E2_2534	0.42	+0.1
2,993,413	+		Pf6N2E2_2534	0.42	+0.1
2,993,414	-		Pf6N2E2_2534	0.43	-1.8
2,993,585	+				-0.4
2,993,585	+				+0.2
2,993,585	+				-1.4
2,993,585	+				+0.7
2,993,585	+				+1.5
2,993,585	+				+1.4
2,993,586	-				+0.3
2,993,586	-				+0.8
2,993,770	+		Pf6N2E2_2535	0.33	-1.4
2,993,771	-		Pf6N2E2_2535	0.33	+0.3
2,993,771	-		Pf6N2E2_2535	0.33	+0.5
2,993,818	+		Pf6N2E2_2535	0.42	-1.2
2,993,819	-		Pf6N2E2_2535	0.43	-0.1
2,993,819	-		Pf6N2E2_2535	0.43	-0.1
2,993,894	-		Pf6N2E2_2535	0.57	+0.2
2,993,974	+		Pf6N2E2_2535	0.72	-0.6
2,993,974	+		Pf6N2E2_2535	0.72	-0.8
2,993,974	+		Pf6N2E2_2535	0.72	-0.9
2,993,974	+		Pf6N2E2_2535	0.72	+0.7
2,993,974	+		Pf6N2E2_2535	0.72	+0.1
2,993,975	-		Pf6N2E2_2535	0.73	+0.5
2,993,975	-		Pf6N2E2_2535	0.73	+0.0
2,993,975	-		Pf6N2E2_2535	0.73	+0.7
2,993,975	-		Pf6N2E2_2535	0.73	-0.3
2,993,975	-		Pf6N2E2_2535	0.73	-0.1
2,993,975	-		Pf6N2E2_2535	0.73	-0.5
2,993,975	-		Pf6N2E2_2535	0.73	+0.8