Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2381
Experiment: Tetracycline 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.0004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,819,730 | + | Pf6N2E2_2380 | 0.75 | +0.9 | |
2,819,896 | + | Pf6N2E2_2380 | 0.81 | +0.4 | |
2,819,896 | + | Pf6N2E2_2380 | 0.81 | -0.1 | |
2,820,031 | + | Pf6N2E2_2380 | 0.86 | -0.2 | |
2,820,072 | - | Pf6N2E2_2380 | 0.87 | -0.3 | |
2,820,288 | + | +0.2 | |||
2,820,288 | + | +0.6 | |||
2,820,427 | + | -0.2 | |||
2,820,428 | - | -1.8 | |||
2,820,478 | - | -1.2 | |||
2,820,478 | - | -1.0 | |||
2,820,926 | + | Pf6N2E2_2381 | 0.66 | -1.2 | |
2,820,926 | + | Pf6N2E2_2381 | 0.66 | -1.9 | |
2,820,926 | + | Pf6N2E2_2381 | 0.66 | -3.7 | |
2,820,926 | + | Pf6N2E2_2381 | 0.66 | -0.3 | |
2,820,926 | + | Pf6N2E2_2381 | 0.66 | -0.4 | |
2,820,926 | + | Pf6N2E2_2381 | 0.66 | -0.1 | |
2,820,926 | + | Pf6N2E2_2381 | 0.66 | +1.2 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | -1.0 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | -0.9 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | -0.2 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | -2.1 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | -2.0 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | -0.2 | |
2,820,927 | - | Pf6N2E2_2381 | 0.66 | +0.2 | |
2,821,179 | + | +0.0 | |||
2,821,179 | + | -0.8 | |||
2,821,179 | + | -1.2 | |||
2,821,180 | - | +0.4 | |||
2,821,291 | + | +1.2 | |||
2,821,291 | + | +0.6 |
Or see this region's nucleotide sequence