Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1450

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,697,745	+		Pf6N2E2_1447	0.81	+0.2
1,697,745	+		Pf6N2E2_1447	0.81	+0.2
1,697,746	-		Pf6N2E2_1447	0.81	+0.0
1,697,746	-		Pf6N2E2_1447	0.81	+0.2
1,697,746	-		Pf6N2E2_1447	0.81	+0.0
1,697,746	-		Pf6N2E2_1447	0.81	-0.1
1,697,756	+		Pf6N2E2_1447	0.83	-0.8
1,697,795	+		Pf6N2E2_1447	0.89	+0.2
1,697,854	+				+0.2
1,697,854	+				-0.0
1,697,854	+				-0.7
1,697,854	+				-0.9
1,697,854	+				+0.2
1,697,854	+				+0.3
1,697,855	-				+0.7
1,697,855	-				-1.2
1,697,856	+				-2.1
1,697,857	-				-2.1
1,698,062	-				+1.3
1,698,141	-		Pf6N2E2_1448	0.21	+0.8
1,698,173	+		Pf6N2E2_1448	0.30	+0.3
1,698,173	+		Pf6N2E2_1448	0.30	-0.1
1,698,173	+		Pf6N2E2_1448	0.30	+0.2
1,698,174	-		Pf6N2E2_1448	0.30	-0.2
1,698,296	+		Pf6N2E2_1448	0.66	+0.1
1,698,401	-				-0.4
1,698,435	+		Pf6N2E2_1449	0.22	+0.7
1,698,515	+				-1.4
1,698,516	-				+0.4
1,698,521	+				+0.1
1,698,522	-				+1.5
1,698,527	+				-0.9
1,698,527	+				+0.3
1,698,528	-				+0.5
1,698,528	-				+0.4
1,698,558	+				+0.1
1,698,558	+				+0.7
1,698,626	+		Pf6N2E2_1450	0.27	+0.2
1,698,639	-		Pf6N2E2_1450	0.32	-1.1
1,698,797	+				-0.2
1,698,939	+				+0.1
1,699,049	-		Pf6N2E2_1451	0.21	-0.9
1,699,268	+		Pf6N2E2_1451	0.44	+0.4
1,699,268	+		Pf6N2E2_1451	0.44	+1.6
1,699,268	+		Pf6N2E2_1451	0.44	-0.3
1,699,268	+		Pf6N2E2_1451	0.44	-1.6
1,699,269	-		Pf6N2E2_1451	0.44	+1.1
1,699,336	+		Pf6N2E2_1451	0.51	-0.2
1,699,336	+		Pf6N2E2_1451	0.51	-0.3
1,699,337	-		Pf6N2E2_1451	0.51	+0.3
1,699,453	+		Pf6N2E2_1451	0.63	+0.7
1,699,453	+		Pf6N2E2_1451	0.63	+0.2
1,699,454	-		Pf6N2E2_1451	0.63	+0.2
1,699,457	+		Pf6N2E2_1451	0.63	+0.4
1,699,750	-				-0.4
1,699,750	-				+0.3
1,699,750	-				+1.3
1,699,750	-				-0.1
1,699,751	+				+0.1
1,699,752	-				-0.3
1,699,752	-				-1.0
1,699,752	-				+0.3
1,699,752	-				+1.2
1,699,753	+				+0.9
1,699,754	-				-1.0
1,699,754	-				+0.9
1,699,754	-				+0.2
1,699,754	-				+2.3
1,699,754	-				+0.5
1,699,763	-				-0.9
1,699,763	-				+0.7