Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1086

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,266,819	+				+0.1
1,266,820	-				+0.6
1,266,835	+				-1.5
1,266,874	-				-0.7
1,266,912	+				-0.6
1,266,913	-				-0.6
1,266,929	+				-1.2
1,267,048	+		Pf6N2E2_1084	0.62	-0.6
1,267,048	+		Pf6N2E2_1084	0.62	-0.1
1,267,435	+		Pf6N2E2_1085	0.80	-0.6
1,267,435	+		Pf6N2E2_1085	0.80	+0.8
1,267,436	-		Pf6N2E2_1085	0.81	-2.5
1,267,560	+				+2.3
1,267,561	-				-0.2
1,267,563	+				-0.3
1,267,564	-				-1.6
1,267,564	-				+0.5
1,267,658	-				+0.5
1,267,994	+				-0.3
1,268,214	-		Pf6N2E2_1086	0.17	+1.2
1,268,699	+		Pf6N2E2_1086	0.38	+0.3
1,268,699	+		Pf6N2E2_1086	0.38	+1.4
1,268,719	+		Pf6N2E2_1086	0.39	-0.2
1,268,834	+				+0.7
1,268,835	-		Pf6N2E2_1086	0.44	+2.3
1,269,062	+		Pf6N2E2_1086	0.54	+0.3
1,269,063	-		Pf6N2E2_1086	0.54	-0.4
1,269,063	-		Pf6N2E2_1086	0.54	+0.3
1,269,212	+		Pf6N2E2_1086	0.60	+0.8
1,269,213	-		Pf6N2E2_1086	0.60	+0.7
1,269,213	-		Pf6N2E2_1086	0.60	-1.7
1,269,251	+		Pf6N2E2_1086	0.62	-0.0
1,269,252	-		Pf6N2E2_1086	0.62	-0.4
1,269,252	-		Pf6N2E2_1086	0.62	-0.9
1,269,860	+		Pf6N2E2_1086	0.87	-1.1
1,269,861	-		Pf6N2E2_1086	0.88	+2.0
1,269,923	+				+1.2
1,270,097	+				+0.6
1,270,098	-				+0.7
1,270,098	-				-0.5
1,270,151	+				-1.6
1,270,186	+				-0.3
1,270,186	+				-0.1
1,270,187	-				+1.3
1,270,187	-				+1.1
1,270,229	+				-0.3
1,270,229	+				-0.5
1,270,229	+				+0.1
1,270,229	+				-0.6
1,270,229	+				+1.7
1,270,229	+				-0.5
1,270,229	+				+0.4
1,270,230	-				-0.5
1,270,352	+				-2.5
1,270,353	-				-0.7
1,270,353	-				-0.4
1,270,353	-				-0.0
1,270,443	-				-1.8
1,270,499	+		Pf6N2E2_1087	0.12	-1.6
1,270,500	-		Pf6N2E2_1087	0.12	-0.5
1,270,500	-		Pf6N2E2_1087	0.12	+0.4
1,270,691	+		Pf6N2E2_1087	0.32	+0.1
1,270,692	-		Pf6N2E2_1087	0.32	+1.0
1,270,692	-		Pf6N2E2_1087	0.32	+0.1
1,270,775	-		Pf6N2E2_1087	0.40	+0.0
1,270,799	+		Pf6N2E2_1087	0.42	+1.1
1,270,799	+		Pf6N2E2_1087	0.42	+0.5
1,270,800	-		Pf6N2E2_1087	0.42	+0.4
1,270,800	-		Pf6N2E2_1087	0.42	+0.1
1,270,807	+		Pf6N2E2_1087	0.43	+0.5
1,270,807	+		Pf6N2E2_1087	0.43	+0.3
1,270,807	+		Pf6N2E2_1087	0.43	+0.3
1,270,807	+		Pf6N2E2_1087	0.43	-0.0
1,270,807	+		Pf6N2E2_1087	0.43	-0.5
1,270,808	-		Pf6N2E2_1087	0.43	-1.5
1,270,808	-		Pf6N2E2_1087	0.43	-1.2
1,270,938	-		Pf6N2E2_1087	0.56	-1.2
1,271,001	+		Pf6N2E2_1087	0.62	-0.4
1,271,001	+		Pf6N2E2_1087	0.62	+0.4
1,271,002	-		Pf6N2E2_1087	0.63	-0.9
1,271,002	-		Pf6N2E2_1087	0.63	+1.1
1,271,002	-		Pf6N2E2_1087	0.63	-0.5
1,271,008	+		Pf6N2E2_1087	0.63	-1.2
1,271,036	+		Pf6N2E2_1087	0.66	-1.6
1,271,037	-		Pf6N2E2_1087	0.66	-1.3
1,271,073	-		Pf6N2E2_1087	0.70	+0.1
1,271,073	-		Pf6N2E2_1087	0.70	-0.9
1,271,095	+		Pf6N2E2_1087	0.72	+0.1
1,271,099	-		Pf6N2E2_1087	0.72	+0.7
1,271,099	-		Pf6N2E2_1087	0.72	-1.4
1,271,099	-		Pf6N2E2_1087	0.72	-0.4