Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00083

Experiment: PYE 4C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep1 28 days
86,834	+				-0.5
86,842	-				+0.2
86,910	+				-1.3
86,910	+				-1.0
86,911	+				-1.1
86,918	-				+0.6
86,919	-				-0.3
86,919	-				+1.5
86,944	-				-1.7
86,962	-				-1.4
86,966	-				-2.0
87,039	+				-3.4
87,039	+				-2.2
87,039	+				+0.6
87,048	-				-2.4
87,054	-				+1.1
87,091	-				-0.6
87,091	-				+1.2
87,091	-				-1.2
87,091	-				-1.4
87,091	-				-0.2
87,125	+				+1.5
87,125	+				+4.8
87,132	-				-0.1
87,140	-				-0.3
87,140	-				+0.9
87,149	+				-1.2
87,185	+				-1.8
87,192	+				-2.0
87,200	-				-0.4
87,266	+		CCNA_00083	0.14	+1.7
87,267	-		CCNA_00083	0.14	-2.9
87,280	-		CCNA_00083	0.14	+0.5
87,287	+		CCNA_00083	0.15	+1.5
87,287	+		CCNA_00083	0.15	-0.1
87,301	-		CCNA_00083	0.16	-0.3
87,302	-		CCNA_00083	0.16	-0.5
87,323	-		CCNA_00083	0.17	-2.4
87,351	-		CCNA_00083	0.19	-0.2
87,361	+		CCNA_00083	0.19	+4.8
87,361	+		CCNA_00083	0.19	-0.1
87,370	+		CCNA_00083	0.20	-0.8
87,380	+		CCNA_00083	0.21	+0.9
87,380	+		CCNA_00083	0.21	-1.9
87,380	+		CCNA_00083	0.21	+3.1
87,380	+		CCNA_00083	0.21	-0.8
87,380	+		CCNA_00083	0.21	-0.7
87,388	-		CCNA_00083	0.21	-3.1
87,431	+		CCNA_00083	0.24	+0.9
87,449	-		CCNA_00083	0.25	-0.2
87,463	+		CCNA_00083	0.26	-0.8
87,463	+		CCNA_00083	0.26	-1.8
87,471	-		CCNA_00083	0.26	-2.6
87,508	+		CCNA_00083	0.28	+4.1
87,606	-		CCNA_00083	0.34	+1.0
87,606	-		CCNA_00083	0.34	+0.4
87,606	-		CCNA_00083	0.34	-2.3
87,625	-		CCNA_00083	0.35	+0.4
87,639	-		CCNA_00083	0.36	+0.7
87,687	+		CCNA_00083	0.39	-0.5
87,695	-		CCNA_00083	0.40	-1.9
87,710	-		CCNA_00083	0.41	-1.9
87,727	-		CCNA_00083	0.42	-2.3
87,790	+		CCNA_00083	0.46	-0.5
87,790	+		CCNA_00083	0.46	-0.5
87,790	+		CCNA_00083	0.46	-0.5
87,790	+		CCNA_00083	0.46	-1.3
87,798	-		CCNA_00083	0.46	+1.3
87,798	-		CCNA_00083	0.46	-0.2
87,823	-		CCNA_00083	0.48	-0.8
87,823	-		CCNA_00083	0.48	-0.1
87,833	-		CCNA_00083	0.48	+1.3
87,833	-		CCNA_00083	0.48	+2.5
87,833	-		CCNA_00083	0.48	+0.1
87,843	+		CCNA_00083	0.49	+0.5
87,851	-		CCNA_00083	0.49	-0.3
87,857	+		CCNA_00083	0.50	+0.5
87,883	-		CCNA_00083	0.51	-1.3
87,911	-		CCNA_00083	0.53	+0.9
87,926	+		CCNA_00083	0.54	-2.5
87,930	+		CCNA_00083	0.54	-0.5
87,930	+		CCNA_00083	0.54	-2.6
87,933	+		CCNA_00083	0.54	-1.1
87,938	-		CCNA_00083	0.55	+1.5
87,938	-		CCNA_00083	0.55	+0.5
87,938	-		CCNA_00083	0.55	+2.5
87,938	-		CCNA_00083	0.55	-2.0
87,938	-		CCNA_00083	0.55	-0.7
87,938	-		CCNA_00083	0.55	+0.4
87,939	-		CCNA_00083	0.55	-2.3
87,957	+		CCNA_00083	0.56	-1.5
87,995	+		CCNA_00083	0.58	-2.9
87,995	+		CCNA_00083	0.58	-0.3
88,000	+		CCNA_00083	0.58	-0.7
88,009	-		CCNA_00083	0.59	-1.5
88,041	+		CCNA_00083	0.61	-0.0
88,041	-		CCNA_00083	0.61	+1.3
88,059	-		CCNA_00083	0.62	-0.8
88,091	+		CCNA_00083	0.64	-1.7
88,099	-		CCNA_00083	0.64	-1.3
88,103	+		CCNA_00083	0.65	+1.5
88,105	+		CCNA_00083	0.65	-1.0
88,111	-		CCNA_00083	0.65	+0.1
88,129	+		CCNA_00083	0.66	-1.1
88,138	-		CCNA_00083	0.67	-2.5
88,142	-		CCNA_00083	0.67	-1.5
88,157	-		CCNA_00083	0.68	-1.2
88,219	-		CCNA_00083	0.72	-0.1
88,242	+		CCNA_00083	0.73	+0.5
88,253	+		CCNA_00083	0.74	+1.3
88,300	+		CCNA_00083	0.77	-1.5
88,300	+		CCNA_00083	0.77	-1.0
88,301	-		CCNA_00083	0.77	-1.0
88,308	-		CCNA_00083	0.77	-0.2
88,308	-		CCNA_00083	0.77	-2.5
88,310	+		CCNA_00083	0.77	-0.7
88,318	-		CCNA_00083	0.78	-0.0
88,340	-		CCNA_00083	0.79	-2.0
88,340	-		CCNA_00083	0.79	+1.1
88,354	+		CCNA_00083	0.80	-1.1
88,387	+		CCNA_00083	0.82	-0.1
88,395	-		CCNA_00083	0.82	+2.3
88,395	-		CCNA_00083	0.82	-0.5
88,409	+		CCNA_00083	0.83	+1.0
88,409	+		CCNA_00083	0.83	-3.1
88,419	+		CCNA_00083	0.84	+1.3
88,419	+		CCNA_00083	0.84	-0.5
88,419	+		CCNA_00083	0.84	-1.5
88,419	+		CCNA_00083	0.84	-1.8
88,419	+		CCNA_00083	0.84	+1.7
88,427	-		CCNA_00083	0.84	+2.2
88,427	-		CCNA_00083	0.84	+0.2
88,427	-		CCNA_00083	0.84	+0.1
88,454	+		CCNA_00083	0.86	-2.1
88,462	-		CCNA_00083	0.86	+0.2
88,462	-		CCNA_00083	0.86	+1.3
88,507	-		CCNA_00083	0.89	-1.3
88,528	+				+2.5
88,528	+				+0.9
88,534	-				+0.7
88,536	-				+1.0
88,541	-				+0.5
88,556	+				-1.0
88,580	+				-1.2
88,580	+				+1.5
88,580	+				-1.9
88,581	+				+2.5
88,588	-				+2.3
88,588	-				+1.5
88,662	+				-3.3
88,672	+				+0.5
88,680	-				-1.3
88,695	+				+0.5
88,704	-				-1.0
88,704	-				-1.1
88,722	+				-0.7
88,722	+				-0.8
88,730	-				-0.3
88,730	-				-3.1
88,730	-				+0.9
88,737	+				-3.3
88,745	-				-1.6
88,745	-				-0.3
88,784	+				+0.4
88,792	-				+0.5
88,792	-				+0.2
88,807	+				+0.6
88,821	+				+0.5
88,853	-				+0.0
88,856	-				-1.3
88,860	+				-1.3
88,881	+				-0.1
88,889	-				+1.3
88,891	+				-0.8
88,894	-				+0.4
88,899	+				+3.7
88,909	-				-2.0
88,932	+				-0.5
88,940	-				-2.3
88,981	+				-0.0
88,981	+				-1.8
89,014	+				+1.5
89,036	+				+0.3
89,036	+				+1.0
89,036	+				+0.3
89,036	+				+0.1
89,036	+				+3.5
89,036	+				+0.7
89,043	+				-0.8
89,044	-				-1.9
89,044	-				-0.5
89,044	-				-1.1
89,044	-				-0.5
89,044	-				-3.7
89,046	-				-0.3
89,099	-				-4.1
89,171	+				-1.4
89,171	+				-0.1
89,179	-				-1.6
89,181	+				-2.6
89,195	+				-0.9
89,235	-		CCNA_00084	0.11	-1.2
89,269	+		CCNA_00084	0.14	-1.2
89,280	+		CCNA_00084	0.14	-2.9
89,343	+		CCNA_00084	0.18	-1.6
89,349	+		CCNA_00084	0.19	-2.9
89,349	+		CCNA_00084	0.19	+0.0
89,349	+		CCNA_00084	0.19	-3.0
89,349	+		CCNA_00084	0.19	-4.1
89,349	+		CCNA_00084	0.19	-4.7
89,349	+		CCNA_00084	0.19	+0.4
89,351	-		CCNA_00084	0.19	-2.0
89,351	-		CCNA_00084	0.19	-1.3
89,357	-		CCNA_00084	0.19	-2.4
89,357	-		CCNA_00084	0.19	-3.2
89,357	-		CCNA_00084	0.19	+1.2
89,397	+		CCNA_00084	0.22	-1.5
89,405	-		CCNA_00084	0.22	-3.4
89,427	+		CCNA_00084	0.24	-4.5
89,436	-		CCNA_00084	0.24	-0.7
89,441	-		CCNA_00084	0.24	-1.0
89,449	+		CCNA_00084	0.25	+0.4
89,457	-		CCNA_00084	0.25	-1.5
89,476	+		CCNA_00084	0.27	-0.6
89,476	+		CCNA_00084	0.27	-0.6
89,476	+		CCNA_00084	0.27	+2.5
89,484	-		CCNA_00084	0.27	+0.5
89,502	-		CCNA_00084	0.28	-3.0
89,583	+		CCNA_00084	0.33	+0.2
89,598	+		CCNA_00084	0.34	-3.3
89,666	+		CCNA_00084	0.39	-1.7
89,666	+		CCNA_00084	0.39	-2.8
89,674	-		CCNA_00084	0.39	-0.8