Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5803

Experiment: Tetracycline 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0002 mg/ml
6,619,707	+		Pf6N2E2_5801	0.82	+0.8
6,619,708	-		Pf6N2E2_5801	0.82	-0.4
6,619,779	+		Pf6N2E2_5801	0.87	+0.1
6,619,780	-		Pf6N2E2_5801	0.87	+1.4
6,619,780	-		Pf6N2E2_5801	0.87	+0.1
6,619,780	-		Pf6N2E2_5801	0.87	-0.2
6,619,870	-				+0.0
6,619,906	+				+0.2
6,619,906	+				-0.2
6,619,907	-				-0.5
6,619,907	-				-0.2
6,619,907	-				+0.7
6,619,907	-				-2.2
6,619,907	-				+1.2
6,619,907	-				+0.2
6,619,907	-				-1.0
6,619,907	-				-0.3
6,619,907	-				+0.0
6,619,907	-				-0.4
6,619,919	+				+0.7
6,619,920	-				+0.9
6,619,920	-				-1.5
6,619,945	+				+0.2
6,619,945	+				+0.4
6,619,945	+				+0.7
6,619,945	+				+1.1
6,619,945	+				+1.6
6,619,945	+				-0.1
6,619,946	-				+0.4
6,619,946	-				-0.0
6,619,946	-				-0.5
6,619,946	-				-0.0
6,619,946	-				+0.3
6,619,964	+				+0.4
6,619,964	+				-0.5
6,619,965	-				+1.0
6,620,011	+				+1.1
6,620,012	-				+0.2
6,620,012	-				+0.1
6,620,034	+				-0.1
6,620,035	-				-1.0
6,620,069	+		Pf6N2E2_5802	0.12	+0.7
6,620,069	+		Pf6N2E2_5802	0.12	+0.4
6,620,069	+		Pf6N2E2_5802	0.12	+1.0
6,620,069	+		Pf6N2E2_5802	0.12	-0.1
6,620,069	+		Pf6N2E2_5802	0.12	+0.3
6,620,069	+		Pf6N2E2_5802	0.12	+0.6
6,620,155	+		Pf6N2E2_5802	0.29	+0.8
6,620,155	+		Pf6N2E2_5802	0.29	+0.8
6,620,156	-				+0.9
6,620,159	+		Pf6N2E2_5802	0.30	+0.2
6,620,159	+		Pf6N2E2_5802	0.30	-0.7
6,620,160	-		Pf6N2E2_5802	0.30	-0.3
6,620,160	-		Pf6N2E2_5802	0.30	+0.1
6,620,160	-		Pf6N2E2_5802	0.30	+0.5
6,620,160	-		Pf6N2E2_5802	0.30	+0.1
6,620,205	+		Pf6N2E2_5802	0.39	-0.7
6,620,205	+		Pf6N2E2_5802	0.39	-0.1
6,620,205	+		Pf6N2E2_5802	0.39	+0.5
6,620,206	-		Pf6N2E2_5802	0.39	-1.0
6,620,663	-				+0.1
6,620,663	-				-0.5
6,620,663	-				+0.4
6,620,896	+		Pf6N2E2_5803	0.24	-0.5
6,620,897	-		Pf6N2E2_5803	0.24	-0.1
6,621,169	+		Pf6N2E2_5803	0.51	-0.5
6,621,202	+		Pf6N2E2_5803	0.54	+0.9
6,621,206	+		Pf6N2E2_5803	0.55	+0.3
6,621,206	+		Pf6N2E2_5803	0.55	+0.8
6,621,207	-		Pf6N2E2_5803	0.55	+1.1
6,621,367	+		Pf6N2E2_5803	0.71	+0.6
6,621,368	-		Pf6N2E2_5803	0.71	+0.5
6,621,368	-		Pf6N2E2_5803	0.71	-0.1
6,621,371	+		Pf6N2E2_5803	0.71	-0.1
6,621,372	-		Pf6N2E2_5803	0.71	+0.4
6,621,639	+				-1.0
6,621,646	+				+0.4
6,621,646	+				-0.6
6,621,647	-				-0.3
6,621,647	-				-0.2
6,621,647	-				+0.5
6,621,673	+				+0.4
6,621,673	+				+2.6
6,621,673	+				+0.1
6,621,674	-				+0.0
6,621,676	+				-0.1
6,621,676	+				-1.8
6,621,676	+				+0.2
6,621,676	+				+0.0
6,621,677	-				+0.3
6,621,677	-				-0.3
6,621,677	-				-0.4
6,621,677	-				-0.0
6,621,677	-				-0.2
6,621,840	+		Pf6N2E2_5804	0.25	+0.6
6,621,877	+		Pf6N2E2_5804	0.32	+0.2
6,621,877	+		Pf6N2E2_5804	0.32	+0.8
6,621,877	+		Pf6N2E2_5804	0.32	+0.0
6,621,878	-		Pf6N2E2_5804	0.32	+0.1
6,622,153	+		Pf6N2E2_5804	0.86	+0.4
6,622,154	-		Pf6N2E2_5804	0.86	-0.4
6,622,257	+				+0.1
6,622,288	+				+0.9
6,622,332	+		Pf6N2E2_5805	0.12	-0.1
6,622,332	+		Pf6N2E2_5805	0.12	-0.1
6,622,333	-		Pf6N2E2_5805	0.12	-0.0
6,622,435	-		Pf6N2E2_5805	0.23	+0.4
6,622,496	+		Pf6N2E2_5805	0.29	+0.8
6,622,497	-		Pf6N2E2_5805	0.29	-0.3
6,622,497	-		Pf6N2E2_5805	0.29	-1.2
6,622,522	+		Pf6N2E2_5805	0.32	-0.7
6,622,582	-		Pf6N2E2_5805	0.38	+0.2
6,622,599	+		Pf6N2E2_5805	0.40	-0.9
6,622,600	-		Pf6N2E2_5805	0.40	+0.6
6,622,600	-		Pf6N2E2_5805	0.40	-0.8
6,622,600	-		Pf6N2E2_5805	0.40	-0.8
6,622,600	-		Pf6N2E2_5805	0.40	-0.3
6,622,615	-		Pf6N2E2_5805	0.42	-0.0
6,622,615	-		Pf6N2E2_5805	0.42	+0.2