Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4174

Experiment: Tetracycline 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0002 mg/ml
4,854,744	-		Pf6N2E2_4172	0.79	-0.2
4,854,744	-		Pf6N2E2_4172	0.79	-0.4
4,854,744	-		Pf6N2E2_4172	0.79	-0.6
4,854,788	+		Pf6N2E2_4172	0.84	+0.5
4,854,788	+		Pf6N2E2_4172	0.84	+0.3
4,854,788	+		Pf6N2E2_4172	0.84	+0.1
4,854,789	-		Pf6N2E2_4172	0.84	-0.9
4,854,789	-		Pf6N2E2_4172	0.84	-1.6
4,854,789	-		Pf6N2E2_4172	0.84	-0.8
4,854,789	-		Pf6N2E2_4172	0.84	+0.4
4,855,061	+		Pf6N2E2_4173	0.20	-1.0
4,855,061	+		Pf6N2E2_4173	0.20	+0.6
4,855,062	-		Pf6N2E2_4173	0.20	-0.1
4,855,062	-		Pf6N2E2_4173	0.20	-0.4
4,855,105	+		Pf6N2E2_4173	0.26	+0.8
4,855,105	+		Pf6N2E2_4173	0.26	+0.5
4,855,105	+		Pf6N2E2_4173	0.26	+0.7
4,855,105	+		Pf6N2E2_4173	0.26	-0.1
4,855,105	+		Pf6N2E2_4173	0.26	+0.2
4,855,106	-		Pf6N2E2_4173	0.26	+0.9
4,855,106	-		Pf6N2E2_4173	0.26	-1.9
4,855,106	-		Pf6N2E2_4173	0.26	+0.0
4,855,398	+		Pf6N2E2_4173	0.70	+0.9
4,855,426	+		Pf6N2E2_4173	0.74	+1.0
4,855,583	+				+0.3
4,855,601	-				+0.7
4,855,675	+				-0.9
4,855,676	-				+0.4
4,855,676	-				+0.6
4,855,676	-				-0.8
4,855,676	-				-0.0
4,855,692	+				-0.9
4,855,693	-				-1.0
4,855,693	-				-0.9
4,855,693	-				-0.3
4,855,693	-				-0.2
4,855,850	+		Pf6N2E2_4174	0.22	+0.1
4,855,850	+		Pf6N2E2_4174	0.22	-0.7
4,855,850	+		Pf6N2E2_4174	0.22	-0.7
4,855,851	-		Pf6N2E2_4174	0.22	+0.2
4,855,851	-		Pf6N2E2_4174	0.22	-0.6
4,855,866	+		Pf6N2E2_4174	0.24	+0.3
4,855,867	-		Pf6N2E2_4174	0.24	-0.8
4,855,867	-		Pf6N2E2_4174	0.24	-1.6
4,855,867	-		Pf6N2E2_4174	0.24	-1.0
4,855,867	-		Pf6N2E2_4174	0.24	-0.9
4,855,916	+		Pf6N2E2_4174	0.30	-0.8
4,855,917	-		Pf6N2E2_4174	0.30	-2.4
4,855,917	-		Pf6N2E2_4174	0.30	-0.8
4,855,953	+		Pf6N2E2_4174	0.35	-0.2
4,855,954	-		Pf6N2E2_4174	0.35	-0.7
4,855,954	-		Pf6N2E2_4174	0.35	-1.1
4,855,954	-		Pf6N2E2_4174	0.35	-0.5
4,855,954	-		Pf6N2E2_4174	0.35	+0.0
4,855,954	-		Pf6N2E2_4174	0.35	+0.5
4,855,954	-		Pf6N2E2_4174	0.35	-0.1
4,855,954	-		Pf6N2E2_4174	0.35	+0.3
4,855,995	-		Pf6N2E2_4174	0.40	+0.0
4,856,006	+		Pf6N2E2_4174	0.42	-0.5
4,856,006	+		Pf6N2E2_4174	0.42	-0.8
4,856,006	+		Pf6N2E2_4174	0.42	-0.3
4,856,006	+		Pf6N2E2_4174	0.42	-1.0
4,856,007	-		Pf6N2E2_4174	0.42	-0.3
4,856,007	-		Pf6N2E2_4174	0.42	-0.7
4,856,007	-		Pf6N2E2_4174	0.42	-0.9
4,856,007	-		Pf6N2E2_4174	0.42	-1.2
4,856,018	-		Pf6N2E2_4174	0.43	+0.4
4,856,018	-		Pf6N2E2_4174	0.43	-0.3
4,856,018	-		Pf6N2E2_4174	0.43	-0.6
4,856,018	-		Pf6N2E2_4174	0.43	+0.2
4,856,018	-		Pf6N2E2_4174	0.43	-1.4
4,856,245	+		Pf6N2E2_4174	0.73	-0.6
4,856,246	-		Pf6N2E2_4174	0.73	-1.4
4,856,252	+		Pf6N2E2_4174	0.74	-0.6
4,856,252	+		Pf6N2E2_4174	0.74	-0.4
4,856,252	+		Pf6N2E2_4174	0.74	-0.3
4,856,252	+		Pf6N2E2_4174	0.74	+0.8
4,856,252	+		Pf6N2E2_4174	0.74	-2.7
4,856,252	+		Pf6N2E2_4174	0.74	-0.9
4,856,252	+		Pf6N2E2_4174	0.74	+0.1
4,856,252	+		Pf6N2E2_4174	0.74	-0.3
4,856,253	-		Pf6N2E2_4174	0.74	-0.7
4,856,253	-		Pf6N2E2_4174	0.74	-0.3
4,856,253	-		Pf6N2E2_4174	0.74	-0.2
4,856,305	+		Pf6N2E2_4174	0.80	-1.2
4,856,305	+		Pf6N2E2_4174	0.80	-1.4
4,856,318	+		Pf6N2E2_4174	0.82	-0.1
4,856,318	+		Pf6N2E2_4174	0.82	-1.0
4,856,318	+		Pf6N2E2_4174	0.82	-0.3
4,856,318	+		Pf6N2E2_4174	0.82	-0.6
4,856,319	-		Pf6N2E2_4174	0.82	-0.4
4,856,319	-		Pf6N2E2_4174	0.82	-1.2
4,856,413	+				+0.1
4,856,414	-				-1.7
4,856,426	+				+0.3
4,856,462	+				-0.6
4,856,462	+				-1.4
4,856,462	+				-0.5
4,856,462	+				-1.2
4,856,462	+				-1.2
4,856,462	+				-0.7
4,856,462	+				+0.6
4,856,462	+				-0.3
4,856,462	+				-0.8
4,856,462	+				-0.0
4,856,463	-				-1.5
4,856,463	-				-0.8
4,856,463	-				+0.7
4,856,463	-				-0.1
4,856,463	-				+1.3
4,856,488	-				+0.2
4,856,523	-				+0.1
4,856,579	+				+0.1
4,856,579	+				-0.8
4,856,580	-				-0.5
4,856,580	-				+0.2
4,856,580	-				-0.1
4,856,592	-				+1.1
4,856,595	+				+1.0
4,856,596	-				-1.4
4,856,596	-				+0.0
4,856,614	+				-0.2
4,856,614	+				-0.4
4,856,614	+				+1.5
4,856,615	-				-0.1
4,856,620	+				+1.7
4,856,621	-				+0.2
4,856,621	-				+0.2
4,856,689	+				-0.4
4,856,690	-				+0.0
4,856,804	+				-0.5
4,856,808	+				-2.4
4,856,808	+				+0.6
4,856,809	-				+0.9
4,856,874	+				+0.1
4,856,874	+				-0.6
4,856,874	+				-0.1
4,856,874	+				-0.3
4,856,875	-				-1.5
4,856,875	-				-0.1
4,856,960	+				+0.4
4,856,960	+				+0.1
4,856,961	-				+0.0
4,856,965	+				-0.8
4,856,965	+				-0.1
4,856,965	+				-0.4
4,856,965	+				-0.0
4,856,965	+				+0.6
4,856,966	-				-0.5
4,856,966	-				+1.5
4,856,966	-				+0.1
4,856,966	-				-0.9
4,856,969	+				-0.0
4,856,969	+				+1.7
4,856,970	-				+0.7
4,856,970	-				-1.3
4,856,970	-				+0.5
4,856,970	-				+0.5
4,857,035	+				+0.5
4,857,036	-				+1.4
4,857,036	-				-0.2
4,857,090	-				+0.2
4,857,114	-				-0.6
4,857,114	-				+0.2
4,857,114	-				+0.1
4,857,118	-				+0.1
4,857,215	+				-0.2
4,857,216	-				+0.4
4,857,216	-				+0.3
4,857,216	-				+0.3
4,857,329	+				-0.9
4,857,340	+				-0.2
4,857,340	+				-0.2
4,857,359	-				-0.9
4,857,384	+				+0.6
4,857,385	-				+0.5
4,857,385	-				-0.1
4,857,405	+				+0.1
4,857,406	-				+1.1
4,857,406	-				+0.1
4,857,406	-				+0.2
4,857,453	+				-0.3
4,857,454	-				-1.8