Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3386

Experiment: Tetracycline 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0002 mg/ml
3,917,121	-		Pf6N2E2_3385	0.70	+0.7
3,917,266	+		Pf6N2E2_3385	0.75	+0.1
3,917,266	+		Pf6N2E2_3385	0.75	-0.1
3,917,266	+		Pf6N2E2_3385	0.75	-1.1
3,917,267	-		Pf6N2E2_3385	0.75	+0.1
3,917,313	+		Pf6N2E2_3385	0.77	-0.2
3,917,314	-		Pf6N2E2_3385	0.77	-0.1
3,917,515	+		Pf6N2E2_3385	0.84	-0.1
3,917,515	+		Pf6N2E2_3385	0.84	-0.6
3,917,516	-		Pf6N2E2_3385	0.84	-0.7
3,917,581	+		Pf6N2E2_3385	0.86	-0.4
3,917,581	+		Pf6N2E2_3385	0.86	+1.2
3,917,581	+		Pf6N2E2_3385	0.86	+0.4
3,917,581	+		Pf6N2E2_3385	0.86	-0.4
3,917,728	-				-2.2
3,917,837	+				-0.6
3,917,837	+				-0.1
3,917,890	-				-0.9
3,917,926	+				-1.7
3,917,926	+				-0.1
3,917,927	-				-0.1
3,917,927	-				+0.9
3,917,927	-				-0.2
3,917,927	-				-0.5
3,917,972	+				+1.5
3,917,972	+				+0.4
3,917,972	+				-0.8
3,917,973	-				+0.7
3,917,973	-				-0.1
3,918,105	+				-0.6
3,918,105	+				-0.3
3,918,105	+				+0.0
3,918,106	-				+1.3
3,918,106	-				+0.6
3,918,106	-				-0.2
3,918,106	-				-2.3
3,918,111	+				+0.8
3,918,111	+				+1.7
3,918,112	-				-0.2
3,918,112	-				+0.3
3,918,172	+		Pf6N2E2_3386	0.29	+0.0
3,918,173	-		Pf6N2E2_3386	0.29	-0.6
3,918,173	-		Pf6N2E2_3386	0.29	-1.8
3,918,173	-		Pf6N2E2_3386	0.29	-0.4
3,918,210	-		Pf6N2E2_3386	0.42	-2.2
3,918,210	-		Pf6N2E2_3386	0.42	-0.1
3,918,210	-		Pf6N2E2_3386	0.42	+0.1
3,918,232	+		Pf6N2E2_3386	0.50	-0.1
3,918,233	-		Pf6N2E2_3386	0.51	-0.2
3,918,358	+				+0.3
3,918,358	+				+0.6
3,918,358	+				+0.4
3,918,359	-				-1.5
3,918,871	-				-0.2
3,918,997	+				-0.7
3,919,050	+				+0.1
3,919,050	+				+0.2
3,919,051	-				+1.2
3,919,105	-				+0.7
3,919,105	-				-0.9
3,919,105	-				-0.1
3,919,105	-				-0.0
3,919,119	+				-0.3
3,919,328	+		Pf6N2E2_3387	0.23	+1.0
3,919,328	+		Pf6N2E2_3387	0.23	+0.6
3,919,328	+		Pf6N2E2_3387	0.23	-0.0
3,919,329	-		Pf6N2E2_3387	0.23	-0.2
3,919,329	-		Pf6N2E2_3387	0.23	+1.2
3,919,329	-		Pf6N2E2_3387	0.23	+0.2