Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2807

Experiment: Tetracycline 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0002 mg/ml
3,292,545	-		Pf6N2E2_2806	0.48	+2.9
3,292,545	-		Pf6N2E2_2806	0.48	+2.0
3,292,568	+		Pf6N2E2_2806	0.50	+2.8
3,292,853	+		Pf6N2E2_2806	0.73	+2.3
3,292,853	+		Pf6N2E2_2806	0.73	+2.6
3,292,979	+		Pf6N2E2_2806	0.83	+2.6
3,293,062	+				+1.7
3,293,062	+				+2.9
3,293,063	-				+2.2
3,293,066	+				+2.6
3,293,066	+				+2.8
3,293,066	+				+3.3
3,293,066	+				+2.6
3,293,066	+				+2.8
3,293,067	-				+2.2
3,293,067	-				+3.3
3,293,067	-				+2.3
3,293,067	-				+2.8
3,293,067	-				+3.2
3,293,067	-				+2.2
3,293,224	-				+0.0
3,293,229	-				-0.1
3,293,477	+				-0.8
3,293,496	+				-1.4
3,293,496	+				-0.2
3,293,496	+				+0.8
3,293,496	+				+0.5
3,293,496	+				-1.4
3,293,497	-				+0.6
3,293,690	+		Pf6N2E2_2807	0.15	-0.2
3,293,918	+		Pf6N2E2_2807	0.30	+0.2
3,293,919	-		Pf6N2E2_2807	0.30	-0.5
3,293,973	+		Pf6N2E2_2807	0.34	+0.4
3,293,975	+		Pf6N2E2_2807	0.34	+0.2
3,293,975	+		Pf6N2E2_2807	0.34	-0.1
3,293,975	+		Pf6N2E2_2807	0.34	+0.5
3,293,975	+		Pf6N2E2_2807	0.34	+1.3
3,293,975	+		Pf6N2E2_2807	0.34	-0.5
3,293,975	+		Pf6N2E2_2807	0.34	+0.8
3,293,976	-		Pf6N2E2_2807	0.34	-0.0
3,293,976	-		Pf6N2E2_2807	0.34	+0.4
3,293,976	-		Pf6N2E2_2807	0.34	+0.2
3,293,976	-		Pf6N2E2_2807	0.34	-0.0
3,293,976	-		Pf6N2E2_2807	0.34	-0.3
3,293,976	-		Pf6N2E2_2807	0.34	+0.3
3,293,976	-		Pf6N2E2_2807	0.34	-0.6
3,293,976	-		Pf6N2E2_2807	0.34	+0.2
3,293,976	-		Pf6N2E2_2807	0.34	-0.4
3,293,976	-		Pf6N2E2_2807	0.34	+0.7
3,293,976	-		Pf6N2E2_2807	0.34	-1.4
3,293,976	-		Pf6N2E2_2807	0.34	-0.0
3,293,982	-		Pf6N2E2_2807	0.34	+0.6
3,293,982	-		Pf6N2E2_2807	0.34	+0.2
3,294,098	-		Pf6N2E2_2807	0.42	-1.3
3,294,114	+		Pf6N2E2_2807	0.43	+1.0
3,294,115	-		Pf6N2E2_2807	0.43	+0.0
3,294,118	-		Pf6N2E2_2807	0.44	+0.1
3,294,118	-		Pf6N2E2_2807	0.44	+0.9
3,294,118	-		Pf6N2E2_2807	0.44	+0.5
3,294,118	-		Pf6N2E2_2807	0.44	+1.0
3,294,275	-		Pf6N2E2_2807	0.54	-0.7
3,294,286	-		Pf6N2E2_2807	0.55	-0.8
3,294,293	-		Pf6N2E2_2807	0.56	+0.7
3,294,552	+		Pf6N2E2_2807	0.73	+0.9
3,294,553	-		Pf6N2E2_2807	0.73	-1.0
3,294,553	-		Pf6N2E2_2807	0.73	-1.0
3,294,901	+				+1.1
3,294,902	-				+1.3
3,294,902	-				+0.6
3,294,902	-				-1.0
3,294,902	-				-1.3
3,294,920	+				+0.6
3,294,920	+				+0.6
3,294,920	+				-0.9
3,294,920	+				+0.7
3,294,921	-				-0.3
3,294,921	-				-0.6
3,294,921	-				+1.0
3,294,934	+				+0.1
3,294,934	+				+0.2
3,295,021	+		Pf6N2E2_2808	0.12	+1.2
3,295,021	+		Pf6N2E2_2808	0.12	-0.0
3,295,022	-		Pf6N2E2_2808	0.13	+0.4
3,295,022	-		Pf6N2E2_2808	0.13	+0.4
3,295,072	+		Pf6N2E2_2808	0.21	+0.5
3,295,072	+		Pf6N2E2_2808	0.21	-0.2
3,295,072	+		Pf6N2E2_2808	0.21	+0.1
3,295,073	-		Pf6N2E2_2808	0.21	+0.5
3,295,073	-		Pf6N2E2_2808	0.21	-0.3
3,295,073	-		Pf6N2E2_2808	0.21	+1.7
3,295,073	-		Pf6N2E2_2808	0.21	+0.0
3,295,073	-		Pf6N2E2_2808	0.21	+1.7
3,295,409	-		Pf6N2E2_2808	0.76	-1.3
3,295,409	-		Pf6N2E2_2808	0.76	+0.5
3,295,599	+				+0.7
3,295,599	+				-0.6
3,295,599	+				+0.3
3,295,600	-				+0.8
3,295,600	-				-0.6
3,295,600	-				-0.3
3,295,600	-				-0.2
3,295,600	-				+0.4
3,295,622	-				+0.8
3,295,622	-				+0.2
3,295,682	+				+0.1
3,295,682	+				-1.0
3,295,682	+				+1.3
3,295,683	-				-1.6
3,295,683	-				+0.3
3,295,744	+				-0.4
3,295,745	-				+0.9
3,295,745	-				+1.1
3,295,746	+				+0.1
3,295,746	+				+0.1
3,295,746	+				+0.3
3,295,747	-				+1.3
3,295,747	-				-0.8
3,295,747	-				+0.5
3,295,785	-				+0.2
3,295,801	+				+0.1
3,295,859	-				+0.6
3,295,885	+				-0.6