Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1005

Experiment: Tetracycline 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0002 mg/ml
1,173,684	-				+0.6
1,173,722	+				+0.3
1,173,722	+				+1.3
1,173,778	+				+1.1
1,173,779	-				+0.8
1,173,816	+				+1.0
1,173,827	+				+2.1
1,173,827	+				+0.3
1,173,827	+				-0.5
1,173,828	-				+0.8
1,173,831	+				-0.5
1,173,831	+				-1.2
1,173,832	-				+1.5
1,173,832	-				+0.0
1,173,832	-				+0.3
1,173,832	-				-0.9
1,173,832	-				+1.5
1,173,946	+		Pf6N2E2_1004	0.21	-0.7
1,173,947	-		Pf6N2E2_1004	0.21	+0.7
1,173,947	-		Pf6N2E2_1004	0.21	-0.5
1,173,947	-		Pf6N2E2_1004	0.21	-0.4
1,173,958	-		Pf6N2E2_1004	0.23	+0.4
1,174,023	-		Pf6N2E2_1004	0.31	-0.3
1,174,049	+		Pf6N2E2_1004	0.35	+1.6
1,174,049	+		Pf6N2E2_1004	0.35	+2.0
1,174,074	-		Pf6N2E2_1004	0.38	-0.7
1,174,081	+		Pf6N2E2_1004	0.39	-0.3
1,174,132	-		Pf6N2E2_1004	0.46	-0.7
1,174,153	+		Pf6N2E2_1004	0.49	-2.3
1,174,313	-		Pf6N2E2_1004	0.70	+0.2
1,174,422	+		Pf6N2E2_1004	0.84	+0.7
1,174,423	-		Pf6N2E2_1004	0.84	+0.0
1,174,423	-		Pf6N2E2_1004	0.84	+1.0
1,174,423	-		Pf6N2E2_1004	0.84	+0.1
1,174,466	+		Pf6N2E2_1004	0.90	-0.1
1,174,466	+		Pf6N2E2_1004	0.90	-0.3
1,174,693	-				+0.5
1,174,759	+		Pf6N2E2_1005	0.14	+1.1
1,174,759	+		Pf6N2E2_1005	0.14	-0.5
1,174,763	+		Pf6N2E2_1005	0.14	-0.5
1,174,763	+		Pf6N2E2_1005	0.14	-0.2
1,174,763	+		Pf6N2E2_1005	0.14	-0.1
1,174,763	+		Pf6N2E2_1005	0.14	+0.2
1,174,764	-		Pf6N2E2_1005	0.14	-0.6
1,174,764	-		Pf6N2E2_1005	0.14	-0.4
1,174,764	-		Pf6N2E2_1005	0.14	+1.1
1,174,806	+		Pf6N2E2_1005	0.19	-0.8
1,174,806	+		Pf6N2E2_1005	0.19	-1.1
1,174,806	+		Pf6N2E2_1005	0.19	+0.8
1,174,807	-		Pf6N2E2_1005	0.19	-1.7
1,174,947	+		Pf6N2E2_1005	0.33	-0.3
1,174,947	+		Pf6N2E2_1005	0.33	-0.9
1,174,947	+		Pf6N2E2_1005	0.33	+1.1
1,174,948	-		Pf6N2E2_1005	0.34	-0.6
1,175,013	-		Pf6N2E2_1005	0.40	-1.5
1,175,048	-		Pf6N2E2_1005	0.44	-1.5
1,175,048	-		Pf6N2E2_1005	0.44	-0.5
1,175,285	-		Pf6N2E2_1005	0.69	+0.5
1,175,564	+				-1.5
1,175,565	-				-0.3
1,175,565	-				+0.4
1,175,593	+				+0.6
1,175,621	+				-1.3
1,175,621	+				-0.3
1,175,621	+				-0.5
1,175,621	+				+0.5
1,175,621	+				-0.7
1,175,621	+				+0.8
1,175,621	+				-0.1
1,175,621	+				+0.0
1,175,622	-				-1.3
1,175,625	+				+0.6
1,175,626	-				+0.1
1,175,676	+				+1.5
1,175,813	-				-0.0
1,175,916	+				-0.7
1,175,964	+				-0.1
1,175,964	+				-0.7
1,175,964	+				-0.4
1,175,965	-				-1.7
1,175,965	-				+0.6
1,176,538	+		Pf6N2E2_1006	0.88	+0.7
1,176,538	+		Pf6N2E2_1006	0.88	+0.3
1,176,538	+		Pf6N2E2_1006	0.88	-1.5
1,176,538	+		Pf6N2E2_1006	0.88	+1.0
1,176,538	+		Pf6N2E2_1006	0.88	-1.0
1,176,539	-		Pf6N2E2_1006	0.88	+0.9