Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21090 and BWI76_RS21095 are separated by 275 nucleotides BWI76_RS21095 and BWI76_RS21100 are separated by 288 nucleotides BWI76_RS21100 and BWI76_RS21105 are separated by 162 nucleotides
BWI76_RS21090: BWI76_RS21090 - cytoskeletal protein RodZ, at 4,412,397 to 4,413,356
_RS21090
BWI76_RS21095: BWI76_RS21095 - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN, at 4,413,632 to 4,414,798
_RS21095
BWI76_RS21100: BWI76_RS21100 - nucleoside-diphosphate kinase, at 4,415,087 to 4,415,518
_RS21100
BWI76_RS21105: BWI76_RS21105 - penicillin-binding protein 1C, at 4,415,681 to 4,418,005
_RS21105
Position (kb)
4413
4414
4415 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4412.757 kb on - strand, within BWI76_RS21090 at 4412.785 kb on - strand at 4413.410 kb on - strand at 4413.440 kb on + strand at 4413.450 kb on - strand at 4413.450 kb on - strand at 4413.612 kb on - strand at 4413.677 kb on - strand at 4413.677 kb on - strand at 4413.679 kb on + strand at 4414.089 kb on + strand, within BWI76_RS21095 at 4414.374 kb on - strand, within BWI76_RS21095 at 4414.438 kb on + strand, within BWI76_RS21095 at 4414.468 kb on - strand, within BWI76_RS21095 at 4414.471 kb on - strand, within BWI76_RS21095 at 4414.505 kb on + strand, within BWI76_RS21095 at 4414.513 kb on - strand, within BWI76_RS21095 at 4414.639 kb on - strand, within BWI76_RS21095 at 4414.713 kb on - strand at 4414.713 kb on - strand at 4414.765 kb on - strand at 4414.961 kb on - strand at 4414.963 kb on - strand at 4415.308 kb on + strand, within BWI76_RS21100 at 4415.391 kb on - strand, within BWI76_RS21100 at 4415.556 kb on - strand at 4415.570 kb on - strand at 4415.775 kb on - strand at 4415.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 4,412,757 - BWI76_RS21090 0.38 -0.3 4,412,785 - +3.0 4,413,410 - -0.2 4,413,440 + -0.1 4,413,450 - -1.2 4,413,450 - -0.5 4,413,612 - +0.6 4,413,677 - -0.3 4,413,677 - +0.2 4,413,679 + -0.1 4,414,089 + BWI76_RS21095 0.39 -0.2 4,414,374 - BWI76_RS21095 0.64 -1.1 4,414,438 + BWI76_RS21095 0.69 -0.8 4,414,468 - BWI76_RS21095 0.72 -1.5 4,414,471 - BWI76_RS21095 0.72 -1.3 4,414,505 + BWI76_RS21095 0.75 -1.4 4,414,513 - BWI76_RS21095 0.75 -0.3 4,414,639 - BWI76_RS21095 0.86 -0.6 4,414,713 - -0.6 4,414,713 - +0.5 4,414,765 - -1.8 4,414,961 - +0.1 4,414,963 - -0.2 4,415,308 + BWI76_RS21100 0.51 -0.6 4,415,391 - BWI76_RS21100 0.70 -0.9 4,415,556 - +0.0 4,415,570 - +0.2 4,415,775 - +0.5 4,415,775 - -0.8
Or see this region's nucleotide sequence