Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18470 and BWI76_RS18475 are separated by 71 nucleotides BWI76_RS18475 and BWI76_RS18480 are separated by 140 nucleotides BWI76_RS18480 and BWI76_RS18485 are separated by 157 nucleotides
BWI76_RS18470: BWI76_RS18470 - hypothetical protein, at 3,831,090 to 3,831,522
_RS18470
BWI76_RS18475: BWI76_RS18475 - hypothetical protein, at 3,831,594 to 3,831,983
_RS18475
BWI76_RS18480: BWI76_RS18480 - LysR family transcriptional regulator, at 3,832,124 to 3,833,044
_RS18480
BWI76_RS18485: BWI76_RS18485 - LysR family transcriptional regulator, at 3,833,202 to 3,834,104
_RS18485
Position (kb)
3832
3833
3834 Strain fitness (log2 ratio)
-2
-1
0
1 at 3831.162 kb on - strand, within BWI76_RS18470 at 3831.284 kb on - strand, within BWI76_RS18470 at 3831.330 kb on + strand, within BWI76_RS18470 at 3831.369 kb on - strand, within BWI76_RS18470 at 3831.592 kb on + strand at 3831.705 kb on + strand, within BWI76_RS18475 at 3831.747 kb on + strand, within BWI76_RS18475 at 3831.754 kb on + strand, within BWI76_RS18475 at 3831.789 kb on + strand, within BWI76_RS18475 at 3831.807 kb on - strand, within BWI76_RS18475 at 3831.820 kb on + strand, within BWI76_RS18475 at 3831.828 kb on - strand, within BWI76_RS18475 at 3831.868 kb on + strand, within BWI76_RS18475 at 3831.935 kb on + strand, within BWI76_RS18475 at 3831.945 kb on + strand at 3831.984 kb on + strand at 3832.003 kb on + strand at 3832.083 kb on + strand at 3832.197 kb on + strand at 3832.220 kb on - strand, within BWI76_RS18480 at 3832.375 kb on - strand, within BWI76_RS18480 at 3832.409 kb on - strand, within BWI76_RS18480 at 3832.434 kb on + strand, within BWI76_RS18480 at 3832.687 kb on + strand, within BWI76_RS18480 at 3832.787 kb on - strand, within BWI76_RS18480 at 3833.272 kb on + strand at 3833.441 kb on - strand, within BWI76_RS18485 at 3833.643 kb on - strand, within BWI76_RS18485 at 3833.758 kb on + strand, within BWI76_RS18485 at 3833.962 kb on - strand, within BWI76_RS18485 at 3833.980 kb on - strand, within BWI76_RS18485 at 3833.995 kb on - strand, within BWI76_RS18485 at 3833.995 kb on - strand, within BWI76_RS18485
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 3,831,162 - BWI76_RS18470 0.17 +0.1 3,831,284 - BWI76_RS18470 0.45 -0.8 3,831,330 + BWI76_RS18470 0.55 -2.2 3,831,369 - BWI76_RS18470 0.64 +1.2 3,831,592 + -0.1 3,831,705 + BWI76_RS18475 0.28 +0.2 3,831,747 + BWI76_RS18475 0.39 -0.7 3,831,754 + BWI76_RS18475 0.41 -0.1 3,831,789 + BWI76_RS18475 0.50 +0.7 3,831,807 - BWI76_RS18475 0.55 -0.0 3,831,820 + BWI76_RS18475 0.58 -0.9 3,831,828 - BWI76_RS18475 0.60 +0.1 3,831,868 + BWI76_RS18475 0.70 +0.5 3,831,935 + BWI76_RS18475 0.87 -0.1 3,831,945 + -1.2 3,831,984 + -0.2 3,832,003 + -0.0 3,832,083 + -0.4 3,832,197 + -0.1 3,832,220 - BWI76_RS18480 0.10 +0.8 3,832,375 - BWI76_RS18480 0.27 +1.0 3,832,409 - BWI76_RS18480 0.31 +0.2 3,832,434 + BWI76_RS18480 0.34 -0.2 3,832,687 + BWI76_RS18480 0.61 +0.1 3,832,787 - BWI76_RS18480 0.72 +0.4 3,833,272 + -0.4 3,833,441 - BWI76_RS18485 0.26 -0.2 3,833,643 - BWI76_RS18485 0.49 -0.3 3,833,758 + BWI76_RS18485 0.62 -1.2 3,833,962 - BWI76_RS18485 0.84 -0.2 3,833,980 - BWI76_RS18485 0.86 -0.0 3,833,995 - BWI76_RS18485 0.88 +0.1 3,833,995 - BWI76_RS18485 0.88 -0.3
Or see this region's nucleotide sequence