Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16215 and BWI76_RS16220 overlap by 23 nucleotides BWI76_RS16220 and BWI76_RS16225 overlap by 1 nucleotides BWI76_RS16225 and BWI76_RS16230 are separated by 36 nucleotides BWI76_RS16230 and BWI76_RS16235 overlap by 4 nucleotides
BWI76_RS16215: BWI76_RS16215 - hypothetical protein, at 3,364,338 to 3,365,288
_RS16215
BWI76_RS16220: BWI76_RS16220 - hypothetical protein, at 3,365,266 to 3,365,468
_RS16220
BWI76_RS16225: BWI76_RS16225 - arginine:ornithine antiporter, at 3,365,468 to 3,366,850
_RS16225
BWI76_RS16230: BWI76_RS16230 - dihydromonapterin reductase, at 3,366,887 to 3,367,612
_RS16230
BWI76_RS16235: BWI76_RS16235 - membrane protein, at 3,367,609 to 3,367,944
_RS16235
Position (kb)
3365
3366
3367 Strain fitness (log2 ratio)
-1
0
1
2 at 3364.581 kb on - strand, within BWI76_RS16215 at 3364.813 kb on + strand, within BWI76_RS16215 at 3364.835 kb on + strand, within BWI76_RS16215 at 3365.240 kb on + strand at 3365.251 kb on - strand at 3365.402 kb on - strand, within BWI76_RS16220 at 3365.522 kb on - strand at 3365.686 kb on - strand at 3365.958 kb on - strand, within BWI76_RS16225 at 3366.062 kb on - strand, within BWI76_RS16225 at 3366.087 kb on - strand, within BWI76_RS16225 at 3366.160 kb on - strand, within BWI76_RS16225 at 3366.356 kb on + strand, within BWI76_RS16225 at 3366.356 kb on + strand, within BWI76_RS16225 at 3366.552 kb on + strand, within BWI76_RS16225 at 3367.111 kb on + strand, within BWI76_RS16230 at 3367.342 kb on - strand, within BWI76_RS16230 at 3367.527 kb on + strand at 3367.557 kb on - strand at 3367.647 kb on + strand, within BWI76_RS16235 at 3367.654 kb on + strand, within BWI76_RS16235 at 3367.816 kb on - strand, within BWI76_RS16235
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 3,364,581 - BWI76_RS16215 0.26 +0.2 3,364,813 + BWI76_RS16215 0.50 +0.7 3,364,835 + BWI76_RS16215 0.52 -0.0 3,365,240 + +0.1 3,365,251 - -0.7 3,365,402 - BWI76_RS16220 0.67 +0.4 3,365,522 - +0.7 3,365,686 - +0.6 3,365,958 - BWI76_RS16225 0.35 -0.1 3,366,062 - BWI76_RS16225 0.43 -0.1 3,366,087 - BWI76_RS16225 0.45 +0.7 3,366,160 - BWI76_RS16225 0.50 +0.6 3,366,356 + BWI76_RS16225 0.64 +1.0 3,366,356 + BWI76_RS16225 0.64 -0.3 3,366,552 + BWI76_RS16225 0.78 +1.8 3,367,111 + BWI76_RS16230 0.31 -0.4 3,367,342 - BWI76_RS16230 0.63 -0.0 3,367,527 + +1.0 3,367,557 - -0.8 3,367,647 + BWI76_RS16235 0.11 +0.1 3,367,654 + BWI76_RS16235 0.13 -1.1 3,367,816 - BWI76_RS16235 0.62 -0.1
Or see this region's nucleotide sequence