Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07685 and BWI76_RS07690 are separated by 53 nucleotides BWI76_RS07690 and BWI76_RS07695 are separated by 67 nucleotides BWI76_RS07695 and BWI76_RS07700 overlap by 8 nucleotides BWI76_RS07700 and BWI76_RS07705 are separated by 64 nucleotides
BWI76_RS07685: BWI76_RS07685 - transketolase, at 1,628,162 to 1,629,097
_RS07685
BWI76_RS07690: BWI76_RS07690 - enterochelin synthetase component D, at 1,629,151 to 1,629,774
_RS07690
BWI76_RS07695: BWI76_RS07695 - TonB-dependent siderophore receptor, at 1,629,842 to 1,632,091
_RS07695
BWI76_RS07700: BWI76_RS07700 - hypothetical protein, at 1,632,084 to 1,632,297
_RS07700
BWI76_RS07705: BWI76_RS07705 - enterochelin esterase, at 1,632,362 to 1,633,561
_RS07705
Position (kb) 1629
1630
1631
1632
1633 Strain fitness (log2 ratio) -1
0
1
2
3 at 1629.163 kb on + strand at 1629.281 kb on - strand, within BWI76_RS07690 at 1629.496 kb on + strand, within BWI76_RS07690 at 1629.507 kb on + strand, within BWI76_RS07690 at 1629.515 kb on - strand, within BWI76_RS07690 at 1629.542 kb on + strand, within BWI76_RS07690 at 1629.685 kb on - strand, within BWI76_RS07690 at 1630.091 kb on + strand, within BWI76_RS07695 at 1630.099 kb on - strand, within BWI76_RS07695 at 1630.143 kb on + strand, within BWI76_RS07695 at 1630.186 kb on + strand at 1630.189 kb on - strand, within BWI76_RS07695 at 1630.391 kb on + strand, within BWI76_RS07695 at 1630.574 kb on + strand, within BWI76_RS07695 at 1630.574 kb on + strand, within BWI76_RS07695 at 1630.582 kb on - strand, within BWI76_RS07695 at 1630.582 kb on - strand, within BWI76_RS07695 at 1630.611 kb on + strand, within BWI76_RS07695 at 1630.712 kb on - strand, within BWI76_RS07695 at 1630.849 kb on - strand, within BWI76_RS07695 at 1630.927 kb on + strand, within BWI76_RS07695 at 1631.014 kb on + strand, within BWI76_RS07695 at 1631.539 kb on + strand, within BWI76_RS07695 at 1631.758 kb on + strand, within BWI76_RS07695 at 1631.842 kb on + strand, within BWI76_RS07695 at 1631.850 kb on - strand, within BWI76_RS07695 at 1632.194 kb on + strand, within BWI76_RS07700 at 1632.372 kb on - strand at 1632.427 kb on - strand at 1632.635 kb on - strand, within BWI76_RS07705 at 1632.875 kb on - strand, within BWI76_RS07705 at 1632.971 kb on + strand, within BWI76_RS07705
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 1,629,163 + -0.1 1,629,281 - BWI76_RS07690 0.21 -0.7 1,629,496 + BWI76_RS07690 0.55 -0.1 1,629,507 + BWI76_RS07690 0.57 -1.1 1,629,515 - BWI76_RS07690 0.58 -0.1 1,629,542 + BWI76_RS07690 0.63 -0.4 1,629,685 - BWI76_RS07690 0.86 -1.1 1,630,091 + BWI76_RS07695 0.11 +0.7 1,630,099 - BWI76_RS07695 0.11 +0.7 1,630,143 + BWI76_RS07695 0.13 +0.9 1,630,186 + +3.7 1,630,189 - BWI76_RS07695 0.15 +2.7 1,630,391 + BWI76_RS07695 0.24 +0.1 1,630,574 + BWI76_RS07695 0.33 +1.6 1,630,574 + BWI76_RS07695 0.33 +0.4 1,630,582 - BWI76_RS07695 0.33 +0.4 1,630,582 - BWI76_RS07695 0.33 +0.6 1,630,611 + BWI76_RS07695 0.34 +0.9 1,630,712 - BWI76_RS07695 0.39 +0.4 1,630,849 - BWI76_RS07695 0.45 +0.3 1,630,927 + BWI76_RS07695 0.48 +1.2 1,631,014 + BWI76_RS07695 0.52 +0.1 1,631,539 + BWI76_RS07695 0.75 +0.8 1,631,758 + BWI76_RS07695 0.85 +0.7 1,631,842 + BWI76_RS07695 0.89 +0.5 1,631,850 - BWI76_RS07695 0.89 +0.3 1,632,194 + BWI76_RS07700 0.51 +0.3 1,632,372 - +1.2 1,632,427 - +2.4 1,632,635 - BWI76_RS07705 0.23 +1.6 1,632,875 - BWI76_RS07705 0.43 +1.8 1,632,971 + BWI76_RS07705 0.51 -0.3
Or see this region's nucleotide sequence