Strain Fitness in Pantoea sp. MT58 around IAI47_18625

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,971,194	+				+1.7
3,971,194	+				-0.2
3,971,222	-				-1.8
3,971,222	-				+2.5
3,971,222	-				-0.7
3,971,256	+				-1.4
3,971,256	+				+2.0
3,971,257	-				+3.5
3,971,257	-				+0.5
3,971,259	-				-0.8
3,971,259	-				-0.5
3,971,283	+				+0.3
3,971,284	-				+2.9
3,971,286	+				+0.2
3,971,286	+				+1.7
3,971,286	+				-1.9
3,971,286	+				-0.5
3,971,286	+				-0.2
3,971,287	-				-1.1
3,971,287	-				-0.9
3,971,287	-				+1.7
3,971,287	-				-0.7
3,971,330	+				+2.4
3,971,330	+				-1.2
3,971,343	+				-1.2
3,971,344	-				+0.5
3,971,374	+				+0.6
3,971,374	+				-0.2
3,971,374	+				+2.4
3,971,374	+				-0.4
3,971,374	+				+2.6
3,971,375	-				-0.5
3,971,375	-				-1.7
3,971,375	-				-0.3
3,971,378	+				+0.9
3,971,378	+				+0.5
3,971,378	+				-0.4
3,971,378	+				+0.5
3,971,379	-				-0.2
3,971,399	+				-1.8
3,971,402	+				-1.4
3,971,402	+				+0.3
3,971,403	-				+0.3
3,971,403	-				+0.3
3,971,451	+				-0.4
3,971,451	+				-2.8
3,971,452	-				+2.3
3,971,455	+				+1.7
3,971,455	+				+0.2
3,971,456	-				-0.2
3,971,456	-				-1.6
3,971,460	+				+0.2
3,971,460	+				+0.1
3,971,460	+				+0.8
3,971,461	-				+3.6
3,971,461	-				-1.2
3,971,461	-				+2.2
3,971,525	+		IAI47_18620	0.16	+0.1
3,971,587	+		IAI47_18620	0.24	-0.8
3,971,587	+		IAI47_18620	0.24	-0.2
3,971,587	+		IAI47_18620	0.24	+1.5
3,971,587	+		IAI47_18620	0.24	+2.4
3,971,588	-		IAI47_18620	0.24	+0.0
3,971,588	-		IAI47_18620	0.24	+4.1
3,971,588	-		IAI47_18620	0.24	-0.6
3,971,588	-		IAI47_18620	0.24	-1.5
3,971,593	-		IAI47_18620	0.24	+0.6
3,971,593	-		IAI47_18620	0.24	-2.0
3,971,613	+		IAI47_18620	0.27	+1.2
3,971,613	+		IAI47_18620	0.27	-0.5
3,971,613	+		IAI47_18620	0.27	+0.2
3,971,613	+		IAI47_18620	0.27	-1.4
3,971,614	-		IAI47_18620	0.27	+0.1
3,971,614	-		IAI47_18620	0.27	+1.3
3,971,614	-		IAI47_18620	0.27	+0.4
3,971,637	+				+1.1
3,971,637	+		IAI47_18620	0.30	-0.3
3,971,637	+		IAI47_18620	0.30	-0.5
3,971,668	-		IAI47_18620	0.34	-0.5
3,971,672	+		IAI47_18620	0.34	+1.6
3,971,673	-		IAI47_18620	0.34	-1.1
3,971,685	+		IAI47_18620	0.36	-1.0
3,971,685	+		IAI47_18620	0.36	-0.8
3,971,686	-		IAI47_18620	0.36	-2.1
3,971,688	+		IAI47_18620	0.36	-1.1
3,971,731	+		IAI47_18620	0.41	-1.0
3,971,732	-		IAI47_18620	0.42	-1.1
3,971,735	-		IAI47_18620	0.42	-1.0
3,971,751	+		IAI47_18620	0.44	+0.1
3,971,758	+		IAI47_18620	0.45	-1.7
3,971,758	+		IAI47_18620	0.45	+0.8
3,971,759	-		IAI47_18620	0.45	+0.2
3,971,759	-		IAI47_18620	0.45	+1.6
3,971,759	-		IAI47_18620	0.45	+2.2
3,971,770	+		IAI47_18620	0.46	-0.8
3,971,770	+		IAI47_18620	0.46	-1.2
3,971,770	+		IAI47_18620	0.46	-1.3
3,971,771	-		IAI47_18620	0.46	+0.1
3,971,778	+		IAI47_18620	0.47	+0.4
3,971,841	+		IAI47_18620	0.55	-0.0
3,971,841	+		IAI47_18620	0.55	-0.7
3,971,841	+		IAI47_18620	0.55	-0.2
3,971,842	-		IAI47_18620	0.55	-0.8
3,971,842	-		IAI47_18620	0.55	+0.1
3,971,855	+		IAI47_18620	0.57	-0.8
3,971,868	+		IAI47_18620	0.58	+0.8
3,971,883	+		IAI47_18620	0.60	+0.9
3,971,883	+		IAI47_18620	0.60	-1.9
3,971,884	-		IAI47_18620	0.60	+4.6
3,971,886	+		IAI47_18620	0.61	+1.9
3,971,886	+		IAI47_18620	0.61	-1.2
3,971,886	+		IAI47_18620	0.61	-1.4
3,971,887	-		IAI47_18620	0.61	+0.1
3,971,887	-		IAI47_18620	0.61	+2.8
3,971,952	-		IAI47_18620	0.69	-1.2
3,971,952	-		IAI47_18620	0.69	+0.1
3,971,952	-		IAI47_18620	0.69	+0.1
3,971,967	+		IAI47_18620	0.71	-0.7
3,971,967	+		IAI47_18620	0.71	-0.2
3,971,967	+		IAI47_18620	0.71	-0.3
3,971,967	+		IAI47_18620	0.71	+0.3
3,971,968	-		IAI47_18620	0.71	-0.3
3,971,968	-		IAI47_18620	0.71	+3.4
3,971,968	-		IAI47_18620	0.71	-0.2
3,972,194	-				+0.6
3,972,202	-				-0.3
3,972,202	-				+4.4
3,972,219	+				-0.1
3,972,315	-		IAI47_18625	0.21	+0.6
3,972,315	-		IAI47_18625	0.21	-0.2
3,972,315	-		IAI47_18625	0.21	-0.3
3,972,341	+		IAI47_18625	0.26	-1.6
3,972,369	+		IAI47_18625	0.30	-2.1
3,972,369	+		IAI47_18625	0.30	-0.4
3,972,369	+		IAI47_18625	0.30	+0.9
3,972,369	+		IAI47_18625	0.30	-1.2
3,972,369	+		IAI47_18625	0.30	-1.0
3,972,369	+		IAI47_18625	0.30	+0.1
3,972,370	-		IAI47_18625	0.31	+3.6
3,972,370	-		IAI47_18625	0.31	+1.0
3,972,370	-		IAI47_18625	0.31	-0.7
3,972,370	-		IAI47_18625	0.31	-0.5
3,972,370	-		IAI47_18625	0.31	-0.5
3,972,441	-		IAI47_18625	0.43	-0.2
3,972,441	-		IAI47_18625	0.43	+0.8
3,972,474	-		IAI47_18625	0.48	-1.1
3,972,474	-		IAI47_18625	0.48	+0.0
3,972,516	+		IAI47_18625	0.56	+2.6
3,972,516	+		IAI47_18625	0.56	-2.3
3,972,516	+		IAI47_18625	0.56	+0.6
3,972,517	-		IAI47_18625	0.56	+3.9
3,972,517	-		IAI47_18625	0.56	+3.0
3,972,517	-		IAI47_18625	0.56	+0.2
3,972,517	-		IAI47_18625	0.56	-0.5
3,972,665	+		IAI47_18625	0.81	-1.5
3,972,665	+		IAI47_18625	0.81	+1.2
3,972,665	+		IAI47_18625	0.81	-1.8
3,972,666	-		IAI47_18625	0.81	-1.5
3,972,666	-		IAI47_18625	0.81	+5.2
3,972,666	-		IAI47_18625	0.81	-0.6
3,972,666	-		IAI47_18625	0.81	+3.7
3,972,666	-		IAI47_18625	0.81	+1.0
3,972,701	+		IAI47_18625	0.87	-1.6
3,972,701	+		IAI47_18625	0.87	-1.5
3,972,701	+		IAI47_18625	0.87	-0.3
3,972,701	+		IAI47_18625	0.87	-2.0
3,972,701	+		IAI47_18625	0.87	-0.2
3,972,701	+		IAI47_18625	0.87	-1.0
3,972,701	+		IAI47_18625	0.87	+0.8
3,972,702	-		IAI47_18625	0.88	-1.1
3,972,702	-		IAI47_18625	0.88	-0.6
3,972,702	-		IAI47_18625	0.88	+0.1
3,972,702	-		IAI47_18625	0.88	-0.7
3,972,702	-		IAI47_18625	0.88	+1.7
3,972,702	-		IAI47_18625	0.88	-1.1
3,972,760	+				-0.8
3,972,761	-				+0.1
3,972,764	+				-0.7
3,972,764	+				-0.4
3,972,765	-				+4.2
3,972,765	-				+2.8
3,972,765	-				+4.3
3,972,812	+				-1.3
3,972,813	-				-0.9
3,972,813	-				+1.4
3,972,813	-				+0.8
3,972,813	-				+3.1
3,972,813	-				-0.7
3,972,814	+				-1.6
3,972,814	+				+0.5
3,972,814	+				-0.7
3,972,814	+				+0.3
3,972,814	+				+0.2
3,972,814	+				+2.9
3,972,814	+				+0.2
3,972,814	+				-1.0
3,972,815	-				+0.6
3,972,815	-				-2.5
3,972,815	-				-2.6
3,972,815	-				-0.4
3,972,815	-				-0.7
3,972,852	-				+0.8
3,972,876	+				-0.2
3,972,887	+				-0.2
3,972,887	+				-0.3
3,972,888	-				+2.6
3,972,894	+				-0.5
3,972,895	-				+0.2
3,972,908	+				+0.1
3,972,908	+				+0.8
3,972,908	+				+0.1
3,972,908	+				+0.8
3,972,908	+				-1.3
3,972,908	+				-0.6
3,972,908	+				-0.1
3,972,908	+				+1.7
3,972,908	+				-0.8
3,972,908	+				-1.4
3,972,908	+				+0.2
3,972,908	+				-0.1
3,972,908	+				-0.5
3,972,909	-				+1.3
3,972,909	-				-0.0
3,972,909	-				+0.5
3,972,909	-				+0.0
3,972,909	-				-0.8
3,972,909	-				-1.4
3,972,909	-				+1.1
3,972,909	-				+2.4
3,972,909	-				-1.2
3,972,909	-				+2.0
3,972,909	-				-0.3
3,972,940	-				-0.4
3,972,943	-				-0.2
3,972,945	+				-0.7
3,972,945	+				-0.1
3,972,946	-				+4.5
3,972,950	+				-0.4
3,973,037	+				-0.8
3,973,037	+				+0.1
3,973,037	+				-1.0
3,973,037	+				+0.7
3,973,038	-				+1.5
3,973,038	-				+0.4
3,973,038	-				-0.7
3,973,038	-				-0.2
3,973,049	+				+2.1
3,973,049	+				-0.2
3,973,049	+				+0.7
3,973,049	+				+0.5
3,973,049	+				-0.6
3,973,049	+				+0.1
3,973,050	-				-0.1
3,973,050	-				+0.4
3,973,050	-				-0.5
3,973,050	-				+0.5
3,973,050	-				-0.7
3,973,053	+				-0.5
3,973,053	+				-0.4
3,973,054	-				+0.1
3,973,054	-				-2.4
3,973,120	+				-0.8
3,973,120	+				+0.9
3,973,120	+				+1.1
3,973,121	-				+0.4
3,973,121	-				+0.1
3,973,121	-				-2.8
3,973,140	-				+2.8
3,973,160	+				+3.5
3,973,160	+				-0.6
3,973,161	-				-0.9
3,973,161	-				-0.1
3,973,190	-				-2.2
3,973,198	+				+3.7
3,973,198	+				-0.4
3,973,199	-				+1.0
3,973,199	-				-1.6
3,973,199	-				-0.7
3,973,199	-				-1.1
3,973,200	-				+1.5
3,973,241	-				-1.0
3,973,244	+				-0.8
3,973,373	-				-2.9
3,973,398	+		IAI47_18630	0.10	+0.1
3,973,398	+		IAI47_18630	0.10	-0.5
3,973,398	+		IAI47_18630	0.10	+0.1
3,973,399	-		IAI47_18630	0.10	+0.5
3,973,399	-		IAI47_18630	0.10	+0.1
3,973,433	+		IAI47_18630	0.14	-1.0
3,973,487	+		IAI47_18630	0.19	-0.3
3,973,487	+		IAI47_18630	0.19	-0.4
3,973,487	+		IAI47_18630	0.19	+1.5
3,973,487	+		IAI47_18630	0.19	+0.8
3,973,487	+		IAI47_18630	0.19	-1.4
3,973,487	+		IAI47_18630	0.19	+0.2
3,973,487	+		IAI47_18630	0.19	-0.8
3,973,487	+		IAI47_18630	0.19	+0.2
3,973,487	+		IAI47_18630	0.19	+0.3
3,973,488	-		IAI47_18630	0.19	+2.6
3,973,488	-		IAI47_18630	0.19	-0.9
3,973,488	-		IAI47_18630	0.19	-0.5
3,973,488	-		IAI47_18630	0.19	-1.0
3,973,488	-		IAI47_18630	0.19	+0.8
3,973,490	+		IAI47_18630	0.19	-3.3
3,973,490	+		IAI47_18630	0.19	-1.5
3,973,490	+		IAI47_18630	0.19	+0.6
3,973,490	+		IAI47_18630	0.19	-0.0
3,973,491	-		IAI47_18630	0.19	+2.8
3,973,515	-		IAI47_18630	0.22	+1.4
3,973,515	-		IAI47_18630	0.22	+1.2
3,973,515	-		IAI47_18630	0.22	-2.0
3,973,547	+		IAI47_18630	0.25	+0.3
3,973,547	+		IAI47_18630	0.25	-1.2
3,973,547	+		IAI47_18630	0.25	+0.1
3,973,547	+		IAI47_18630	0.25	+1.1
3,973,547	+		IAI47_18630	0.25	+0.7
3,973,548	-		IAI47_18630	0.25	+1.9
3,973,549	+		IAI47_18630	0.25	+0.1
3,973,549	+		IAI47_18630	0.25	-1.7
3,973,549	+		IAI47_18630	0.25	-0.2
3,973,549	+		IAI47_18630	0.25	-1.5
3,973,550	-		IAI47_18630	0.25	+1.8
3,973,550	-		IAI47_18630	0.25	+0.3
3,973,550	-		IAI47_18630	0.25	+1.9
3,973,550	-		IAI47_18630	0.25	+5.0
3,973,550	-		IAI47_18630	0.25	+1.5
3,973,550	-		IAI47_18630	0.25	-0.0
3,973,596	+		IAI47_18630	0.30	+2.9
3,973,596	+		IAI47_18630	0.30	-1.4
3,973,597	-		IAI47_18630	0.30	+0.6
3,973,597	-		IAI47_18630	0.30	+0.6
3,973,612	+		IAI47_18630	0.31	-0.8
3,973,612	+		IAI47_18630	0.31	-1.6
3,973,612	+		IAI47_18630	0.31	-0.1
3,973,612	+		IAI47_18630	0.31	-0.6
3,973,612	+		IAI47_18630	0.31	-1.9
3,973,613	-		IAI47_18630	0.31	-0.4
3,973,635	+		IAI47_18630	0.33	+1.2
3,973,635	+		IAI47_18630	0.33	+0.8
3,973,635	+		IAI47_18630	0.33	+1.3
3,973,635	+		IAI47_18630	0.33	-0.2
3,973,635	+		IAI47_18630	0.33	-1.7
3,973,636	-		IAI47_18630	0.34	-0.5
3,973,636	-		IAI47_18630	0.34	-1.1
3,973,644	+		IAI47_18630	0.34	-1.6
3,973,645	-		IAI47_18630	0.34	-0.6
3,973,645	-		IAI47_18630	0.34	-0.4
3,973,645	-		IAI47_18630	0.34	-0.5
3,973,645	-		IAI47_18630	0.34	-0.1
3,973,654	-		IAI47_18630	0.35	+0.0
3,973,667	+		IAI47_18630	0.37	-0.4
3,973,667	+		IAI47_18630	0.37	+0.4
3,973,668	-		IAI47_18630	0.37	-1.5
3,973,668	-		IAI47_18630	0.37	-0.8
3,973,668	-		IAI47_18630	0.37	+1.8
3,973,668	-				+2.1
3,973,675	+		IAI47_18630	0.37	-0.1
3,973,675	+		IAI47_18630	0.37	-0.5
3,973,675	+		IAI47_18630	0.37	+1.7
3,973,675	+		IAI47_18630	0.37	-0.5
3,973,675	+		IAI47_18630	0.37	-0.9
3,973,675	+		IAI47_18630	0.37	-0.7
3,973,675	+		IAI47_18630	0.37	-1.2
3,973,675	+		IAI47_18630	0.37	-0.0
3,973,675	+		IAI47_18630	0.37	+1.1
3,973,676	-		IAI47_18630	0.37	-0.4
3,973,676	-		IAI47_18630	0.37	-1.1
3,973,676	-		IAI47_18630	0.37	-0.5
3,973,676	-		IAI47_18630	0.37	-0.8
3,973,676	-		IAI47_18630	0.37	+0.2
3,973,676	-		IAI47_18630	0.37	-0.2
3,973,688	+		IAI47_18630	0.39	-0.8