Strain Fitness in Pantoea sp. MT58 around IAI47_08680

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,832,759	+				+0.5
1,832,760	-				-0.1
1,832,760	-				+0.0
1,832,764	+				+0.6
1,832,764	+				+1.3
1,832,764	+				+2.2
1,832,765	-				+1.2
1,832,765	-				+0.2
1,832,765	-				-2.8
1,832,773	+				+1.0
1,832,774	-				-0.8
1,832,781	+				-0.4
1,832,781	+				+2.0
1,832,782	-				+0.3
1,832,782	-				-0.7
1,832,782	-				+1.2
1,832,782	-				+0.5
1,832,782	-				-1.0
1,832,782	-				-0.7
1,832,789	+				-0.1
1,832,789	+				+1.7
1,832,789	+				+1.1
1,832,806	+				+1.3
1,832,807	-				-0.8
1,832,841	+				+2.7
1,832,934	+				-0.8
1,832,936	+				-0.4
1,832,936	+				+0.8
1,832,936	+				+0.4
1,832,937	-				+0.5
1,832,937	-				-0.7
1,832,937	-				-0.2
1,832,937	-				-0.8
1,832,948	-				+0.2
1,832,982	-				+0.2
1,832,982	-				-0.5
1,832,982	-				-0.1
1,833,060	+		IAI47_08675	0.13	-0.9
1,833,060	+		IAI47_08675	0.13	+2.0
1,833,061	-		IAI47_08675	0.13	+0.5
1,833,061	-		IAI47_08675	0.13	+0.9
1,833,061	-		IAI47_08675	0.13	-1.5
1,833,076	+		IAI47_08675	0.16	-0.7
1,833,076	+		IAI47_08675	0.16	+0.6
1,833,076	+		IAI47_08675	0.16	+0.9
1,833,076	+		IAI47_08675	0.16	-2.4
1,833,077	-		IAI47_08675	0.16	+0.0
1,833,100	-		IAI47_08675	0.19	-1.0
1,833,122	-		IAI47_08675	0.23	-1.4
1,833,370	+		IAI47_08675	0.61	+0.7
1,833,370	+		IAI47_08675	0.61	-0.2
1,833,371	-		IAI47_08675	0.61	+1.0
1,833,392	+		IAI47_08675	0.64	+1.2
1,833,392	+		IAI47_08675	0.64	-0.2
1,833,393	-		IAI47_08675	0.65	-0.3
1,833,418	+		IAI47_08675	0.68	+2.9
1,833,419	-		IAI47_08675	0.69	-1.3
1,833,419	-		IAI47_08675	0.69	+1.5
1,833,515	+		IAI47_08675	0.83	+0.7
1,833,515	+		IAI47_08675	0.83	+0.1
1,833,534	+		IAI47_08675	0.86	-0.2
1,833,535	-		IAI47_08675	0.86	+1.5
1,833,566	+				+1.0
1,833,566	+				+0.7
1,833,566	+				-0.4
1,833,566	+				-1.0
1,833,566	+				-0.3
1,833,566	+				-1.7
1,833,567	-				+0.9
1,833,567	-				+0.7
1,833,568	+				-0.1
1,833,568	+				-1.2
1,833,568	+				+1.5
1,833,569	-				+3.1
1,833,569	-				-0.9
1,833,569	-				+0.0
1,833,569	-				+1.6
1,833,625	+				+0.5
1,833,625	+				+0.2
1,833,664	+				+1.2
1,833,665	-				+0.2
1,833,665	-				+0.3
1,833,721	+				-1.2
1,833,721	+				-0.1
1,833,721	+				+2.2
1,833,722	-				-0.7
1,833,722	-				+0.3
1,833,722	-				-0.8
1,833,763	+				+1.5
1,833,763	+				+0.7
1,833,764	-				-1.2
1,833,764	-				-0.7
1,833,768	-				+1.1
1,833,768	-				+0.8
1,833,971	+		IAI47_08680	0.24	+1.7
1,834,008	+		IAI47_08680	0.26	+1.5
1,834,008	+		IAI47_08680	0.26	+1.2
1,834,008	+		IAI47_08680	0.26	+0.5
1,834,009	-		IAI47_08680	0.26	-0.2
1,834,009	-		IAI47_08680	0.26	-0.7
1,834,010	+		IAI47_08680	0.26	+1.2
1,834,010	+		IAI47_08680	0.26	+0.2
1,834,011	-		IAI47_08680	0.26	-0.3
1,834,079	+		IAI47_08680	0.31	-0.8
1,834,088	+		IAI47_08680	0.32	+1.9
1,834,088	+		IAI47_08680	0.32	+1.2
1,834,088	+		IAI47_08680	0.32	-0.3
1,834,089	-		IAI47_08680	0.32	+0.2
1,834,089	-		IAI47_08680	0.32	+2.5
1,834,089	-		IAI47_08680	0.32	+1.2
1,834,089	-		IAI47_08680	0.32	-2.2
1,834,089	-		IAI47_08680	0.32	-0.1
1,834,090	+		IAI47_08680	0.32	-0.7
1,834,091	-		IAI47_08680	0.32	-2.8
1,834,091	-		IAI47_08680	0.32	-0.1
1,834,186	+		IAI47_08680	0.38	-1.3
1,834,186	+		IAI47_08680	0.38	-2.9
1,834,187	-		IAI47_08680	0.38	-0.3
1,834,187	-		IAI47_08680	0.38	-1.2
1,834,313	+		IAI47_08680	0.47	-0.7
1,834,314	-		IAI47_08680	0.47	-0.1
1,834,314	-		IAI47_08680	0.47	-2.9
1,834,314	-		IAI47_08680	0.47	-0.1
1,834,325	-		IAI47_08680	0.48	-0.8
1,834,540	-		IAI47_08680	0.62	-0.3
1,834,664	+		IAI47_08680	0.71	-1.7
1,834,664	+		IAI47_08680	0.71	-1.8
1,834,686	-		IAI47_08680	0.72	+0.9
1,834,762	+		IAI47_08680	0.78	-1.4
1,834,762	+		IAI47_08680	0.78	-1.5
1,834,762	+		IAI47_08680	0.78	-0.4
1,834,762	+		IAI47_08680	0.78	+1.2
1,834,763	-		IAI47_08680	0.78	+1.9
1,834,763	-		IAI47_08680	0.78	-0.5
1,834,908	+		IAI47_08680	0.88	+0.3
1,834,909	-		IAI47_08680	0.88	-0.8
1,834,932	-		IAI47_08680	0.89	-1.8
1,834,932	-		IAI47_08680	0.89	-0.2
1,834,957	+				-2.5
1,834,958	-				+0.7
1,834,958	-				+1.2
1,834,964	+				-0.5
1,834,965	-				+0.7
1,834,965	-				-0.8
1,835,067	-				-1.0
1,835,067	-				-0.2
1,835,085	+				-1.0
1,835,085	+				+0.6
1,835,289	+				+0.2
1,835,290	-				-0.8
1,835,290	-				-0.3
1,835,297	+				-0.2
1,835,297	+				+0.2
1,835,297	+				+1.2
1,835,297	+				-0.6
1,835,297	+				+0.7
1,835,298	-				+3.7
1,835,298	-				+0.6
1,835,298	-				-0.4
1,835,298	-				-1.8
1,835,298	-				+0.4
1,835,298	-				+0.4
1,835,298	-				+1.5
1,835,299	+				-1.1
1,835,299	+				-2.0
1,835,299	+				+1.3
1,835,299	+				-1.0
1,835,300	-				+0.3
1,835,313	+				+0.8
1,835,314	-				-0.4
1,835,388	+				-0.5
1,835,388	+				+0.3
1,835,555	+				-1.0
1,835,583	+				-0.6
1,835,583	+				+0.0
1,835,583	+				-1.0
1,835,584	-				-1.1
1,835,584	-				+0.6
1,835,584	-				+2.9
1,835,584	-				+0.4
1,835,584	-				+4.8
1,835,584	-				+1.3
1,835,586	+				+1.1
1,835,586	+				+2.6
1,835,586	+				+0.0
1,835,586	+				-2.1
1,835,587	-				+0.6
1,835,587	-				+0.0
1,835,603	+				+0.5
1,835,604	-				+0.6
1,835,650	-		IAI47_08685	0.11	-0.3
1,835,650	-		IAI47_08685	0.11	+2.3
1,835,744	+		IAI47_08685	0.15	+1.0
1,835,744	+		IAI47_08685	0.15	-0.1
1,835,744	+		IAI47_08685	0.15	+0.7
1,835,745	-		IAI47_08685	0.15	-0.1
1,835,745	-		IAI47_08685	0.15	-0.5
1,835,745	-		IAI47_08685	0.15	-0.9
1,835,745	-		IAI47_08685	0.15	+0.9
1,835,745	-		IAI47_08685	0.15	+2.5
1,835,745	-		IAI47_08685	0.15	+2.2
1,835,745	-		IAI47_08685	0.15	+1.3
1,835,765	+		IAI47_08685	0.16	-1.6
1,835,843	+		IAI47_08685	0.18	-0.3
1,835,843	+		IAI47_08685	0.18	+1.5
1,835,843	+		IAI47_08685	0.18	+1.2
1,835,844	-		IAI47_08685	0.19	+1.2
1,835,844	-		IAI47_08685	0.19	-1.2
1,835,844	-		IAI47_08685	0.19	+1.6
1,835,844	-		IAI47_08685	0.19	+0.0
1,835,942	+		IAI47_08685	0.22	+0.3
1,835,942	+		IAI47_08685	0.22	-0.2
1,835,942	+		IAI47_08685	0.22	+2.3
1,835,942	+		IAI47_08685	0.22	+0.6
1,835,943	-		IAI47_08685	0.22	+1.1
1,835,951	+		IAI47_08685	0.23	+0.0
1,835,952	-		IAI47_08685	0.23	+1.5
1,835,968	+		IAI47_08685	0.23	+1.0
1,835,983	-		IAI47_08685	0.24	+2.1
1,836,022	-		IAI47_08685	0.25	+1.1
1,836,045	+		IAI47_08685	0.26	-0.2
1,836,060	+		IAI47_08685	0.27	+0.3
1,836,060	+		IAI47_08685	0.27	+1.6
1,836,061	-		IAI47_08685	0.27	+0.7
1,836,072	-		IAI47_08685	0.27	-1.0
1,836,072	-		IAI47_08685	0.27	+1.9
1,836,072	-		IAI47_08685	0.27	+0.0
1,836,072	-		IAI47_08685	0.27	+0.7
1,836,072	-		IAI47_08685	0.27	+0.9
1,836,085	-		IAI47_08685	0.28	+0.5
1,836,085	-		IAI47_08685	0.28	+1.3
1,836,085	-		IAI47_08685	0.28	-1.6