Strain Fitness in Pantoea sp. MT58 around IAI47_06860

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,432,275	-		IAI47_06855	0.29	+0.5
1,432,530	+		IAI47_06855	0.47	+1.0
1,432,531	-		IAI47_06855	0.48	+1.2
1,432,582	-		IAI47_06855	0.51	+1.0
1,432,743	+		IAI47_06855	0.63	-0.2
1,432,792	-		IAI47_06855	0.66	+0.4
1,432,794	+		IAI47_06855	0.66	+1.7
1,432,794	+		IAI47_06855	0.66	+2.3
1,432,795	-		IAI47_06855	0.67	+0.1
1,432,851	+		IAI47_06855	0.71	+0.6
1,432,851	+		IAI47_06855	0.71	+1.2
1,432,851	+		IAI47_06855	0.71	+1.2
1,432,852	-		IAI47_06855	0.71	+2.4
1,432,852	-		IAI47_06855	0.71	+0.1
1,432,923	+		IAI47_06855	0.76	-0.2
1,432,923	+		IAI47_06855	0.76	+0.5
1,432,923	+		IAI47_06855	0.76	-0.5
1,432,923	+		IAI47_06855	0.76	+0.3
1,432,924	-		IAI47_06855	0.76	-1.1
1,432,924	-		IAI47_06855	0.76	+0.4
1,432,924	-		IAI47_06855	0.76	+0.2
1,432,924	-		IAI47_06855	0.76	+2.3
1,432,925	+		IAI47_06855	0.76	+0.6
1,432,925	+		IAI47_06855	0.76	-2.0
1,432,925	+		IAI47_06855	0.76	+2.6
1,432,925	+		IAI47_06855	0.76	+3.2
1,432,925	+		IAI47_06855	0.76	+0.9
1,432,926	-		IAI47_06855	0.76	-0.4
1,432,926	-		IAI47_06855	0.76	-0.3
1,432,926	-		IAI47_06855	0.76	-0.5
1,432,926	-		IAI47_06855	0.76	-1.9
1,432,926	-		IAI47_06855	0.76	+0.2
1,432,926	-		IAI47_06855	0.76	+0.3
1,432,926	-		IAI47_06855	0.76	+0.7
1,432,926	-		IAI47_06855	0.76	-0.1
1,432,973	-		IAI47_06855	0.79	-0.5
1,433,019	+		IAI47_06855	0.83	-0.3
1,433,020	-		IAI47_06855	0.83	-1.4
1,433,072	+		IAI47_06855	0.86	-0.6
1,433,072	+		IAI47_06855	0.86	-1.0
1,433,073	-		IAI47_06855	0.87	-1.4
1,433,073	-		IAI47_06855	0.87	-2.2
1,433,105	-		IAI47_06855	0.89	-1.7
1,433,128	-				-0.6
1,433,132	+				-1.1
1,433,132	+				-1.6
1,433,133	-				-0.2
1,433,133	-				-1.4
1,433,133	-				-0.1
1,433,202	+				+1.1
1,433,217	+				-1.3
1,433,250	+				-1.0
1,433,250	+				-1.0
1,433,250	+				+2.4
1,433,250	+				-2.7
1,433,251	-				+1.1
1,433,251	-				-0.0
1,433,251	-				+0.8
1,433,251	-				-0.1
1,433,339	+				+0.2
1,433,340	-				+0.2
1,433,340	-				+0.8
1,433,359	+				+0.4
1,433,359	+				-1.0
1,433,359	+				+2.6
1,433,359	+				+0.5
1,433,359	+				-2.3
1,433,360	-				+0.4
1,433,360	-				+0.5
1,433,363	+				-1.0
1,433,363	+				-0.6
1,433,363	+				-2.1
1,433,363	+				-1.3
1,433,363	+				-0.3
1,433,363	+				+1.2
1,433,364	-				+1.8
1,433,364	-				-1.2
1,433,365	+				+1.6
1,433,365	+				+0.2
1,433,366	-				-0.4
1,433,366	-				-0.2
1,433,366	-				-0.2
1,433,366	-				-0.7
1,433,366	-				-0.9
1,433,366	-				-0.3
1,433,366	-				-0.2
1,433,366	-				-0.7
1,433,369	+				-1.2
1,433,369	+				+0.6
1,433,369	+				+0.2
1,433,369	+				-1.8
1,433,369	+				-0.9
1,433,370	-				-0.2
1,433,370	-				+0.6
1,433,471	+		IAI47_06860	0.15	-0.7
1,433,471	+		IAI47_06860	0.15	+2.6
1,433,471	+		IAI47_06860	0.15	+1.2
1,433,472	-		IAI47_06860	0.15	-0.0
1,433,472	-		IAI47_06860	0.15	+0.2
1,433,472	-		IAI47_06860	0.15	+0.8
1,433,472	-		IAI47_06860	0.15	+0.6
1,433,472	-		IAI47_06860	0.15	+1.5
1,433,472	-		IAI47_06860	0.15	-0.0
1,433,472	-		IAI47_06860	0.15	-0.8
1,433,472	-		IAI47_06860	0.15	+0.3
1,433,537	+		IAI47_06860	0.20	+0.8
1,433,537	+		IAI47_06860	0.20	-0.3
1,433,537	+		IAI47_06860	0.20	-0.8
1,433,538	-		IAI47_06860	0.20	-0.7
1,433,692	+		IAI47_06860	0.31	-0.3
1,433,692	+		IAI47_06860	0.31	+0.2
1,433,715	+		IAI47_06860	0.33	-0.5
1,433,715	+		IAI47_06860	0.33	-0.3
1,433,732	+		IAI47_06860	0.34	-0.5
1,433,732	+		IAI47_06860	0.34	+1.7
1,433,782	+		IAI47_06860	0.37	+1.2
1,433,782	+		IAI47_06860	0.37	-0.3
1,433,783	-		IAI47_06860	0.37	-1.2
1,433,807	+		IAI47_06860	0.39	+0.1
1,433,816	+		IAI47_06860	0.40	-0.5
1,433,816	+		IAI47_06860	0.40	+1.8
1,433,816	+		IAI47_06860	0.40	+0.7
1,433,817	-		IAI47_06860	0.40	-0.4
1,433,817	-		IAI47_06860	0.40	-2.4
1,433,817	-		IAI47_06860	0.40	+1.4
1,433,849	+		IAI47_06860	0.42	-0.5
1,433,875	+		IAI47_06860	0.44	+0.7
1,433,876	-		IAI47_06860	0.44	+0.2
1,433,915	+		IAI47_06860	0.47	-1.4
1,433,915	+		IAI47_06860	0.47	-0.8
1,433,915	+		IAI47_06860	0.47	-0.6
1,433,916	-		IAI47_06860	0.47	-2.1
1,433,916	-		IAI47_06860	0.47	+0.4
1,433,934	+		IAI47_06860	0.48	-1.0
1,433,934	+		IAI47_06860	0.48	+0.8
1,433,934	+		IAI47_06860	0.48	+0.3
1,433,934	+		IAI47_06860	0.48	-2.0
1,433,934	+		IAI47_06860	0.48	+0.6
1,433,935	-		IAI47_06860	0.48	-0.1
1,433,935	-		IAI47_06860	0.48	-0.4
1,433,935	-		IAI47_06860	0.48	+2.4
1,433,935	-		IAI47_06860	0.48	+1.0
1,433,941	+		IAI47_06860	0.49	+1.4
1,433,941	+		IAI47_06860	0.49	+1.2
1,433,941	+		IAI47_06860	0.49	+1.8
1,433,941	+		IAI47_06860	0.49	-0.1
1,433,941	+		IAI47_06860	0.49	+0.3
1,434,100	+		IAI47_06860	0.60	+0.6
1,434,101	-		IAI47_06860	0.60	-0.0
1,434,101	-		IAI47_06860	0.60	-0.5
1,434,101	-		IAI47_06860	0.60	-0.6
1,434,101	-		IAI47_06860	0.60	+0.7
1,434,101	-		IAI47_06860	0.60	+0.8
1,434,184	+		IAI47_06860	0.66	-1.0
1,434,184	+		IAI47_06860	0.66	+0.7
1,434,185	-		IAI47_06860	0.66	+0.2
1,434,185	-		IAI47_06860	0.66	+0.3
1,434,185	-		IAI47_06860	0.66	-0.2
1,434,189	+		IAI47_06860	0.66	-0.0
1,434,189	+		IAI47_06860	0.66	+0.7
1,434,189	+		IAI47_06860	0.66	+0.3
1,434,189	+		IAI47_06860	0.66	+0.6
1,434,189	+		IAI47_06860	0.66	-0.7
1,434,189	+		IAI47_06860	0.66	-1.2
1,434,189	+		IAI47_06860	0.66	-1.8
1,434,189	+		IAI47_06860	0.66	-0.8
1,434,189	+		IAI47_06860	0.66	-1.2
1,434,189	+		IAI47_06860	0.66	-0.3
1,434,190	-		IAI47_06860	0.66	-2.0
1,434,190	-		IAI47_06860	0.66	-0.7
1,434,192	+		IAI47_06860	0.67	-2.0
1,434,193	-		IAI47_06860	0.67	-0.3
1,434,193	-		IAI47_06860	0.67	+1.0
1,434,266	+		IAI47_06860	0.72	-1.2
1,434,266	+		IAI47_06860	0.72	-0.5
1,434,266	+		IAI47_06860	0.72	-0.3
1,434,266	+		IAI47_06860	0.72	+0.4
1,434,266	+		IAI47_06860	0.72	+0.8
1,434,266	+		IAI47_06860	0.72	-0.4
1,434,266	+		IAI47_06860	0.72	-0.9
1,434,266	+		IAI47_06860	0.72	-0.7
1,434,266	+		IAI47_06860	0.72	-0.5
1,434,266	+		IAI47_06860	0.72	+0.8
1,434,266	+		IAI47_06860	0.72	-0.4
1,434,266	+		IAI47_06860	0.72	-0.8
1,434,266	+		IAI47_06860	0.72	+0.8
1,434,266	+		IAI47_06860	0.72	+1.1
1,434,266	+		IAI47_06860	0.72	-0.2
1,434,266	+		IAI47_06860	0.72	+0.8
1,434,267	-		IAI47_06860	0.72	+1.0
1,434,267	-		IAI47_06860	0.72	-1.8
1,434,267	-		IAI47_06860	0.72	+0.3
1,434,267	-		IAI47_06860	0.72	-2.3
1,434,267	-		IAI47_06860	0.72	-0.5
1,434,267	-		IAI47_06860	0.72	-0.4
1,434,267	-		IAI47_06860	0.72	-1.2
1,434,267	-		IAI47_06860	0.72	+0.7
1,434,267	-		IAI47_06860	0.72	-1.4
1,434,267	-		IAI47_06860	0.72	-0.2
1,434,267	-		IAI47_06860	0.72	-0.5
1,434,267	-		IAI47_06860	0.72	+0.4
1,434,267	-		IAI47_06860	0.72	-1.0
1,434,267	-		IAI47_06860	0.72	-0.4
1,434,267	-		IAI47_06860	0.72	-0.8
1,434,268	+		IAI47_06860	0.72	-0.4
1,434,268	+		IAI47_06860	0.72	+0.2
1,434,268	+		IAI47_06860	0.72	-0.2
1,434,268	+		IAI47_06860	0.72	-0.0
1,434,268	+		IAI47_06860	0.72	-1.5
1,434,268	+		IAI47_06860	0.72	+0.8
1,434,268	+		IAI47_06860	0.72	-0.6
1,434,268	+		IAI47_06860	0.72	-0.8
1,434,268	+		IAI47_06860	0.72	-1.2
1,434,268	+		IAI47_06860	0.72	-0.0
1,434,268	+		IAI47_06860	0.72	-1.5
1,434,268	+		IAI47_06860	0.72	-1.8
1,434,268	+		IAI47_06860	0.72	-1.0
1,434,268	+		IAI47_06860	0.72	+0.8
1,434,269	-		IAI47_06860	0.72	+0.2
1,434,269	-		IAI47_06860	0.72	+0.6
1,434,269	-		IAI47_06860	0.72	-0.9
1,434,269	-		IAI47_06860	0.72	-0.5
1,434,269	-		IAI47_06860	0.72	-0.8
1,434,269	-		IAI47_06860	0.72	+1.2
1,434,269	-		IAI47_06860	0.72	-1.2
1,434,269	-		IAI47_06860	0.72	-0.3
1,434,269	-		IAI47_06860	0.72	+0.2
1,434,269	-		IAI47_06860	0.72	-0.4
1,434,269	-		IAI47_06860	0.72	+0.8
1,434,269	-		IAI47_06860	0.72	-1.5
1,434,405	-		IAI47_06860	0.82	+1.1
1,434,484	-		IAI47_06860	0.87	+1.6
1,434,502	+		IAI47_06860	0.89	+1.0
1,434,502	+		IAI47_06860	0.89	+1.0
1,434,502	+		IAI47_06860	0.89	-0.3
1,434,502	+		IAI47_06860	0.89	-1.0
1,434,502	+		IAI47_06860	0.89	+0.8
1,434,502	+		IAI47_06860	0.89	-0.4
1,434,502	+		IAI47_06860	0.89	+1.7
1,434,503	-		IAI47_06860	0.89	-1.2
1,434,503	-		IAI47_06860	0.89	-0.7
1,434,503	-		IAI47_06860	0.89	+0.6
1,434,503	-		IAI47_06860	0.89	+0.1
1,434,503	-		IAI47_06860	0.89	+1.7
1,434,503	-		IAI47_06860	0.89	+0.1
1,434,505	+		IAI47_06860	0.89	-1.1
1,434,505	+		IAI47_06860	0.89	-1.0
1,434,505	+		IAI47_06860	0.89	+0.4
1,434,506	-		IAI47_06860	0.89	-0.2
1,434,506	-		IAI47_06860	0.89	+0.3
1,434,506	-		IAI47_06860	0.89	+0.3
1,434,506	-		IAI47_06860	0.89	+1.0
1,434,506	-		IAI47_06860	0.89	-0.4
1,434,506	-		IAI47_06860	0.89	-0.1
1,434,602	+				+1.2
1,434,602	+				+0.6
1,434,602	+				-0.8
1,434,602	+				-0.1
1,434,645	-				+0.9
1,434,645	-				+0.8
1,434,656	+				-1.7
1,434,657	-				-0.5
1,434,657	-				-0.2
1,434,676	-				-1.6
1,434,712	+				-0.1
1,434,775	+				+1.4
1,434,776	-				-0.6
1,434,776	-				+0.1
1,434,793	+				+1.1
1,434,793	+				+0.1
1,434,793	+				-0.2
1,434,793	+				-0.0
1,434,793	+				+1.0
1,434,794	-				-0.6
1,434,794	-				+1.0
1,434,794	-				+0.8
1,434,836	+				-0.7
1,434,836	+				-0.9
1,434,837	-				+0.5
1,434,926	+				+0.1
1,434,926	+				-0.6
1,434,926	+				+0.2
1,434,926	+				+0.8
1,434,926	+				-1.8
1,434,927	-				-1.0
1,434,927	-				+0.7
1,434,927	-				-0.2
1,434,927	-				+0.8
1,434,927	-				-1.7
1,434,927	-				+1.5
1,435,083	-		IAI47_06865	0.12	-0.5
1,435,142	+		IAI47_06865	0.14	+2.2
1,435,143	-		IAI47_06865	0.14	-0.6
1,435,143	-		IAI47_06865	0.14	+0.9
1,435,143	-		IAI47_06865	0.14	-0.6
1,435,168	+		IAI47_06865	0.15	-0.1
1,435,168	+		IAI47_06865	0.15	+1.0
1,435,169	-		IAI47_06865	0.15	-0.5
1,435,169	-		IAI47_06865	0.15	+0.4
1,435,169	-		IAI47_06865	0.15	+1.8
1,435,169	-		IAI47_06865	0.15	+0.2
1,435,169	-		IAI47_06865	0.15	+0.6
1,435,169	-		IAI47_06865	0.15	+1.6
1,435,169	-		IAI47_06865	0.15	-0.5
1,435,169	-		IAI47_06865	0.15	+0.3
1,435,169	-		IAI47_06865	0.15	-0.4
1,435,196	+		IAI47_06865	0.16	+0.7
1,435,197	-		IAI47_06865	0.16	+1.2
1,435,198	+		IAI47_06865	0.16	-0.3
1,435,198	+		IAI47_06865	0.16	-1.5
1,435,198	+		IAI47_06865	0.16	+1.6
1,435,198	+		IAI47_06865	0.16	-0.5
1,435,198	+		IAI47_06865	0.16	+2.9
1,435,199	-		IAI47_06865	0.16	+1.6
1,435,199	-		IAI47_06865	0.16	+0.8
1,435,199	-		IAI47_06865	0.16	-0.6
1,435,199	-		IAI47_06865	0.16	+1.6
1,435,469	+		IAI47_06865	0.24	+3.2
1,435,478	+		IAI47_06865	0.25	+0.1
1,435,482	+		IAI47_06865	0.25	-0.9
1,435,482	+		IAI47_06865	0.25	-1.7
1,435,482	+		IAI47_06865	0.25	+1.6
1,435,511	+		IAI47_06865	0.26	+0.7
1,435,511	+		IAI47_06865	0.26	-1.1
1,435,512	-		IAI47_06865	0.26	+2.6
1,435,552	+		IAI47_06865	0.27	-1.2
1,435,553	-		IAI47_06865	0.27	+1.1
1,435,553	-		IAI47_06865	0.27	-0.5
1,435,570	+		IAI47_06865	0.28	-0.7
1,435,570	+		IAI47_06865	0.28	+1.3
1,435,570	+		IAI47_06865	0.28	-1.1
1,435,574	+		IAI47_06865	0.28	+1.6
1,435,575	-		IAI47_06865	0.28	-0.4
1,435,575	-		IAI47_06865	0.28	+0.1
1,435,604	+		IAI47_06865	0.29	+1.0
1,435,633	+		IAI47_06865	0.30	+1.0