Strain Fitness in Pantoea sp. MT58 around IAI47_06780

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,414,878	-				+1.1
1,414,878	-				+0.7
1,414,878	-				-1.2
1,414,878	-				+1.3
1,414,878	-				+0.2
1,414,878	-				+0.4
1,414,878	-				+1.5
1,414,878	-				+0.1
1,414,878	-				+1.0
1,414,878	-				+3.2
1,414,885	-				+0.3
1,414,885	-				+1.4
1,414,885	-				-1.5
1,414,911	+				-1.3
1,414,912	-				+1.0
1,414,912	-				+0.5
1,414,912	-				+0.6
1,414,912	-				+2.1
1,414,912	-				+0.0
1,414,956	+				-0.4
1,414,957	-				+1.1
1,414,968	+				+0.8
1,414,968	+				+0.6
1,414,968	+				+1.6
1,414,968	+				-0.5
1,414,968	+				+7.0
1,414,969	-				+0.9
1,414,969	-				+0.5
1,414,969	-				+0.1
1,414,969	-				+1.9
1,414,988	+				-1.0
1,414,988	+				-0.1
1,414,988	+				-0.3
1,414,988	+				+0.6
1,414,988	+				+0.9
1,414,989	-				-0.2
1,414,989	-				+0.7
1,414,989	-				+1.1
1,414,989	-				+2.9
1,414,989	-				+0.1
1,415,003	+				-0.9
1,415,003	+				+0.9
1,415,003	+				-1.9
1,415,003	+				-0.7
1,415,004	-				-1.0
1,415,004	-				+0.3
1,415,023	+				+1.0
1,415,023	+				+3.1
1,415,023	+				+1.1
1,415,023	+				+4.2
1,415,023	+				+1.0
1,415,023	+				+1.4
1,415,023	+				-1.8
1,415,024	-				+0.1
1,415,024	-				+0.4
1,415,024	-				+1.5
1,415,024	-				+1.2
1,415,077	+				+2.0
1,415,106	-				+0.2
1,415,289	-		IAI47_06780	0.25	+2.1
1,415,345	+		IAI47_06780	0.30	+1.8
1,415,345	+		IAI47_06780	0.30	+1.2
1,415,345	+		IAI47_06780	0.30	+2.2
1,415,378	+		IAI47_06780	0.33	+1.1
1,415,378	+		IAI47_06780	0.33	+4.1
1,415,395	+		IAI47_06780	0.34	+0.6
1,415,395	+		IAI47_06780	0.34	+1.9
1,415,396	-		IAI47_06780	0.34	+0.4
1,415,399	+		IAI47_06780	0.34	+1.0
1,415,400	-		IAI47_06780	0.35	+1.7
1,415,400	-		IAI47_06780	0.35	+1.6
1,415,453	+		IAI47_06780	0.39	+0.0
1,415,454	-		IAI47_06780	0.39	-0.7
1,415,457	+		IAI47_06780	0.40	+2.5
1,415,458	-		IAI47_06780	0.40	+2.5
1,415,458	-		IAI47_06780	0.40	+1.3
1,415,458	-		IAI47_06780	0.40	+1.6
1,415,458	-		IAI47_06780	0.40	+0.5
1,415,525	+		IAI47_06780	0.46	+3.5
1,415,525	+		IAI47_06780	0.46	+0.6
1,415,526	-		IAI47_06780	0.46	+1.9
1,415,526	-		IAI47_06780	0.46	+4.0
1,415,571	+		IAI47_06780	0.50	+1.1
1,415,572	-		IAI47_06780	0.50	+2.5
1,415,621	+		IAI47_06780	0.54	+2.1
1,415,630	+		IAI47_06780	0.55	+0.5
1,415,630	+		IAI47_06780	0.55	+0.3
1,415,630	+		IAI47_06780	0.55	+2.0
1,415,671	-		IAI47_06780	0.59	-0.9
1,415,684	+		IAI47_06780	0.60	+0.2
1,415,684	+		IAI47_06780	0.60	+1.4
1,415,685	-		IAI47_06780	0.60	+1.1
1,415,843	-		IAI47_06780	0.74	-1.8
1,415,843	-		IAI47_06780	0.74	-0.1
1,415,849	+		IAI47_06780	0.75	-0.5
1,415,849	+		IAI47_06780	0.75	+1.5
1,415,849	+		IAI47_06780	0.75	+1.4
1,415,849	+		IAI47_06780	0.75	-0.6
1,415,849	+		IAI47_06780	0.75	+0.8
1,415,849	+		IAI47_06780	0.75	+1.0
1,415,849	+		IAI47_06780	0.75	+1.7
1,415,849	+		IAI47_06780	0.75	-1.6
1,415,850	-		IAI47_06780	0.75	+2.1
1,415,850	-		IAI47_06780	0.75	+0.3
1,415,931	+		IAI47_06780	0.82	+4.4
1,415,931	+		IAI47_06780	0.82	+0.8
1,415,931	+		IAI47_06780	0.82	+2.0
1,416,032	+				+0.8
1,416,042	+				+0.5
1,416,043	-				+0.9
1,416,078	+				+1.3
1,416,078	+				+1.0
1,416,127	-				+1.5
1,416,127	-				+0.3
1,416,150	+				+1.0
1,416,150	+				-0.6
1,416,150	+				-0.3
1,416,151	-				+2.6
1,416,151	-				-0.7
1,416,168	+				-0.5
1,416,183	+		IAI47_06785	0.13	+0.5
1,416,184	-		IAI47_06785	0.13	+0.1
1,416,237	+		IAI47_06785	0.25	-0.3
1,416,237	+		IAI47_06785	0.25	-0.4
1,416,274	+		IAI47_06785	0.33	+1.3
1,416,274	+		IAI47_06785	0.33	+0.8
1,416,274	+		IAI47_06785	0.33	-0.1
1,416,274	+		IAI47_06785	0.33	+1.0
1,416,274	+		IAI47_06785	0.33	+0.2
1,416,274	+		IAI47_06785	0.33	-0.7
1,416,275	-		IAI47_06785	0.33	+0.1
1,416,275	-		IAI47_06785	0.33	+2.4
1,416,275	-		IAI47_06785	0.33	-0.5
1,416,293	-		IAI47_06785	0.37	-0.8
1,416,306	-		IAI47_06785	0.40	-0.2
1,416,306	-		IAI47_06785	0.40	+2.1
1,416,360	+		IAI47_06785	0.52	+1.7
1,416,360	+		IAI47_06785	0.52	-0.7
1,416,360	+		IAI47_06785	0.52	+1.5
1,416,360	+		IAI47_06785	0.52	+0.6
1,416,361	-		IAI47_06785	0.52	+1.4
1,416,361	-		IAI47_06785	0.52	-1.6
1,416,361	-		IAI47_06785	0.52	-0.7
1,416,361	-		IAI47_06785	0.52	-0.3
1,416,361	-		IAI47_06785	0.52	+0.7
1,416,361	-		IAI47_06785	0.52	-0.0
1,416,455	-		IAI47_06785	0.72	+0.8
1,416,508	+		IAI47_06785	0.84	-0.0
1,416,508	+		IAI47_06785	0.84	+1.2
1,416,509	-		IAI47_06785	0.84	+0.0
1,416,509	-		IAI47_06785	0.84	+0.3
1,416,509	-		IAI47_06785	0.84	-0.6
1,416,509	-		IAI47_06785	0.84	+0.2
1,416,509	-		IAI47_06785	0.84	+2.2
1,416,509	-		IAI47_06785	0.84	+1.4
1,416,509	-		IAI47_06785	0.84	+0.9
1,416,535	+				+0.9
1,416,535	+				-0.5
1,416,536	-				-1.3
1,416,563	-				+2.1
1,416,594	-				+0.6
1,416,594	-				+0.5
1,416,606	+				+0.8
1,416,607	-				-0.0
1,416,607	-				-1.0
1,416,607	-				+2.0
1,416,614	+				-0.6
1,416,614	+				+1.9
1,416,615	-				-1.6
1,416,639	+				+0.5
1,416,639	+				+0.9
1,416,640	-				-0.0
1,416,680	-				+0.1
1,416,689	+				-0.0
1,416,690	-				+1.4
1,416,690	-				+0.8
1,416,745	+				+0.5
1,416,767	+				+0.0
1,416,767	+				+1.5
1,416,767	+				+0.5
1,416,768	-				-0.9
1,416,768	-				-1.8
1,416,770	+				+0.8
1,416,770	+				+1.4
1,416,770	+				+2.5
1,416,770	+				-0.0
1,416,770	+				-0.3
1,416,771	-				-1.6
1,416,789	+				+0.3
1,416,794	-				-0.9
1,416,807	+				-0.6
1,416,807	+				+0.1
1,416,833	+				+2.8
1,416,833	+				+2.9
1,416,834	-				-0.6
1,416,834	-				+0.5
1,416,834	-				-0.2
1,416,836	+				+2.1
1,416,836	+				+1.7
1,416,836	+				+3.1
1,416,836	+				+5.2
1,416,898	+		IAI47_06790	0.12	+1.3
1,416,898	+		IAI47_06790	0.12	+2.7
1,416,920	+		IAI47_06790	0.16	+0.8
1,416,942	+		IAI47_06790	0.20	+2.3
1,416,988	+		IAI47_06790	0.28	+1.3
1,416,999	+		IAI47_06790	0.30	+2.1
1,416,999	+		IAI47_06790	0.30	+3.0
1,417,024	+		IAI47_06790	0.35	-0.0
1,417,024	+		IAI47_06790	0.35	+1.7
1,417,024	+		IAI47_06790	0.35	+2.0
1,417,032	+		IAI47_06790	0.36	+3.8
1,417,032	+		IAI47_06790	0.36	+3.1
1,417,058	+		IAI47_06790	0.41	+2.5
1,417,107	+		IAI47_06790	0.49	+2.2
1,417,107	+		IAI47_06790	0.49	+3.8
1,417,107	+		IAI47_06790	0.49	+1.1