Experiment: Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11405 and BWI76_RS11410 are separated by 88 nucleotides BWI76_RS11410 and BWI76_RS11415 are separated by 128 nucleotides BWI76_RS11415 and BWI76_RS11420 are separated by 314 nucleotides BWI76_RS11420 and BWI76_RS11425 are separated by 35 nucleotides
BWI76_RS11405: BWI76_RS11405 - lipid A biosynthesis acyltransferase, at 2,403,823 to 2,404,737
_RS11405
BWI76_RS11410: BWI76_RS11410 - leucine efflux protein, at 2,404,826 to 2,405,464
_RS11410
BWI76_RS11415: BWI76_RS11415 - hypothetical protein, at 2,405,593 to 2,405,856
_RS11415
BWI76_RS11420: BWI76_RS11420 - hypothetical protein, at 2,406,171 to 2,406,368
_RS11420
BWI76_RS11425: BWI76_RS11425 - GAF domain/diguanylate cyclase, at 2,406,404 to 2,407,417
_RS11425
Position (kb)
2404
2405
2406 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2403.858 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.875 kb on + strand at 2403.880 kb on + strand at 2403.881 kb on + strand at 2403.883 kb on - strand at 2403.883 kb on - strand at 2403.883 kb on - strand at 2403.883 kb on - strand at 2403.883 kb on - strand at 2403.885 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.886 kb on + strand at 2403.891 kb on + strand at 2403.893 kb on - strand at 2403.894 kb on - strand at 2403.896 kb on + strand at 2403.907 kb on + strand at 2403.912 kb on + strand at 2403.920 kb on - strand, within BWI76_RS11405 at 2403.920 kb on - strand, within BWI76_RS11405 at 2403.920 kb on - strand, within BWI76_RS11405 at 2403.942 kb on - strand at 2403.968 kb on + strand, within BWI76_RS11405 at 2404.084 kb on - strand, within BWI76_RS11405 at 2404.107 kb on + strand, within BWI76_RS11405 at 2404.228 kb on - strand, within BWI76_RS11405 at 2404.246 kb on + strand, within BWI76_RS11405 at 2404.560 kb on + strand, within BWI76_RS11405 at 2404.562 kb on + strand, within BWI76_RS11405 at 2404.568 kb on - strand, within BWI76_RS11405 at 2404.570 kb on - strand, within BWI76_RS11405 at 2404.570 kb on - strand, within BWI76_RS11405 at 2404.570 kb on - strand, within BWI76_RS11405 at 2404.606 kb on - strand, within BWI76_RS11405 at 2404.609 kb on + strand, within BWI76_RS11405 at 2404.688 kb on - strand at 2404.777 kb on + strand at 2404.785 kb on - strand at 2404.877 kb on + strand at 2404.877 kb on + strand at 2405.126 kb on - strand, within BWI76_RS11410 at 2405.253 kb on - strand, within BWI76_RS11410 at 2405.461 kb on - strand at 2405.737 kb on - strand at 2405.958 kb on - strand at 2405.973 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 2.5 mM remove 2,403,858 + +1.6 2,403,875 + -2.5 2,403,875 + +0.1 2,403,875 + +0.2 2,403,875 + +0.3 2,403,875 + -0.1 2,403,875 + +0.8 2,403,875 + -0.4 2,403,875 + +0.4 2,403,880 + -1.1 2,403,881 + -1.1 2,403,883 - -1.5 2,403,883 - -0.7 2,403,883 - +0.0 2,403,883 - +0.5 2,403,883 - +1.2 2,403,885 + -0.8 2,403,886 + -0.9 2,403,886 + +0.2 2,403,886 + -0.6 2,403,886 + -0.2 2,403,886 + +0.2 2,403,886 + -0.2 2,403,886 + +1.4 2,403,886 + -0.4 2,403,886 + +0.1 2,403,886 + +0.4 2,403,886 + -0.5 2,403,891 + -0.1 2,403,893 - -0.3 2,403,894 - -1.1 2,403,896 + +0.4 2,403,907 + +1.3 2,403,912 + +0.1 2,403,920 - BWI76_RS11405 0.11 +0.7 2,403,920 - BWI76_RS11405 0.11 +0.0 2,403,920 - BWI76_RS11405 0.11 -0.3 2,403,942 - +0.8 2,403,968 + BWI76_RS11405 0.16 -1.1 2,404,084 - BWI76_RS11405 0.29 +0.1 2,404,107 + BWI76_RS11405 0.31 +0.4 2,404,228 - BWI76_RS11405 0.44 +0.7 2,404,246 + BWI76_RS11405 0.46 +0.4 2,404,560 + BWI76_RS11405 0.81 +0.1 2,404,562 + BWI76_RS11405 0.81 -1.3 2,404,568 - BWI76_RS11405 0.81 +0.9 2,404,570 - BWI76_RS11405 0.82 -1.0 2,404,570 - BWI76_RS11405 0.82 -0.6 2,404,570 - BWI76_RS11405 0.82 +0.8 2,404,606 - BWI76_RS11405 0.86 -0.0 2,404,609 + BWI76_RS11405 0.86 -0.2 2,404,688 - -0.7 2,404,777 + -0.4 2,404,785 - -0.6 2,404,877 + -0.9 2,404,877 + +1.0 2,405,126 - BWI76_RS11410 0.47 -0.5 2,405,253 - BWI76_RS11410 0.67 -0.4 2,405,461 - -0.3 2,405,737 - +1.8 2,405,958 - -0.1 2,405,973 - -0.1
Or see this region's nucleotide sequence