Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09855

Experiment: Chlorite 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09850 and BWI76_RS09855 overlap by 64 nucleotidesBWI76_RS09855 and BWI76_RS09860 are separated by 149 nucleotidesBWI76_RS09860 and BWI76_RS09865 are separated by 13 nucleotides BWI76_RS09850: BWI76_RS09850 - L,D-transpeptidase, at 2,069,449 to 2,071,242 _RS09850 BWI76_RS09855: BWI76_RS09855 - hypothetical protein, at 2,071,179 to 2,071,393 _RS09855 BWI76_RS09860: BWI76_RS09860 - hypothetical protein, at 2,071,543 to 2,072,094 _RS09860 BWI76_RS09865: BWI76_RS09865 - MBL fold hydrolase, at 2,072,108 to 2,072,755 _RS09865 Position (kb) 2071 2072Strain fitness (log2 ratio) -1 0 1at 2070.386 kb on + strand, within BWI76_RS09850at 2070.725 kb on - strand, within BWI76_RS09850at 2070.731 kb on + strand, within BWI76_RS09850at 2070.739 kb on - strand, within BWI76_RS09850at 2070.907 kb on - strand, within BWI76_RS09850at 2070.953 kb on - strand, within BWI76_RS09850at 2070.959 kb on - strand, within BWI76_RS09850at 2071.000 kb on + strand, within BWI76_RS09850at 2071.003 kb on - strand, within BWI76_RS09850at 2071.038 kb on - strand, within BWI76_RS09850at 2071.332 kb on + strand, within BWI76_RS09855at 2071.433 kb on + strandat 2071.455 kb on + strandat 2071.455 kb on + strandat 2071.478 kb on + strandat 2071.818 kb on + strand, within BWI76_RS09860at 2071.818 kb on + strand, within BWI76_RS09860at 2071.826 kb on - strand, within BWI76_RS09860at 2071.826 kb on - strand, within BWI76_RS09860at 2072.025 kb on - strand, within BWI76_RS09860at 2072.244 kb on + strand, within BWI76_RS09865at 2072.262 kb on - strand, within BWI76_RS09865at 2072.312 kb on + strand, within BWI76_RS09865at 2072.317 kb on + strand, within BWI76_RS09865at 2072.317 kb on + strand, within BWI76_RS09865at 2072.317 kb on + strand, within BWI76_RS09865at 2072.325 kb on - strand, within BWI76_RS09865

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 2.5 mM
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2,070,386 + BWI76_RS09850 0.52 -0.5
2,070,725 - BWI76_RS09850 0.71 -0.5
2,070,731 + BWI76_RS09850 0.71 +0.1
2,070,739 - BWI76_RS09850 0.72 -0.5
2,070,907 - BWI76_RS09850 0.81 +0.3
2,070,953 - BWI76_RS09850 0.84 -0.3
2,070,959 - BWI76_RS09850 0.84 -1.1
2,071,000 + BWI76_RS09850 0.86 -0.1
2,071,003 - BWI76_RS09850 0.87 +0.0
2,071,038 - BWI76_RS09850 0.89 -0.1
2,071,332 + BWI76_RS09855 0.71 -0.3
2,071,433 + -0.1
2,071,455 + +0.7
2,071,455 + +0.9
2,071,478 + +0.4
2,071,818 + BWI76_RS09860 0.50 +1.5
2,071,818 + BWI76_RS09860 0.50 +1.6
2,071,826 - BWI76_RS09860 0.51 -0.2
2,071,826 - BWI76_RS09860 0.51 +1.6
2,072,025 - BWI76_RS09860 0.87 +1.4
2,072,244 + BWI76_RS09865 0.21 +0.4
2,072,262 - BWI76_RS09865 0.24 +0.6
2,072,312 + BWI76_RS09865 0.31 -0.6
2,072,317 + BWI76_RS09865 0.32 -0.1
2,072,317 + BWI76_RS09865 0.32 -0.1
2,072,317 + BWI76_RS09865 0.32 -0.7
2,072,325 - BWI76_RS09865 0.33 +0.6

Or see this region's nucleotide sequence