Experiment: Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08790 and BWI76_RS08795 are separated by 4 nucleotides BWI76_RS08795 and BWI76_RS08800 overlap by 4 nucleotides BWI76_RS08800 and BWI76_RS08805 are separated by 111 nucleotides
BWI76_RS08790: BWI76_RS08790 - two-component sensor histidine kinase, at 1,853,744 to 1,854,841
_RS08790
BWI76_RS08795: BWI76_RS08795 - DNA-binding response regulator, at 1,854,846 to 1,855,517
_RS08795
BWI76_RS08800: BWI76_RS08800 - phosphoethanolamine transferase EptA, at 1,855,514 to 1,857,157
_RS08800
BWI76_RS08805: BWI76_RS08805 - gluconeogenesis factor, at 1,857,269 to 1,858,174
_RS08805
Position (kb)
1855
1856
1857
1858 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1854.619 kb on + strand, within BWI76_RS08790 at 1854.629 kb on - strand, within BWI76_RS08790 at 1854.638 kb on + strand, within BWI76_RS08790 at 1854.821 kb on - strand at 1854.851 kb on - strand at 1854.893 kb on - strand at 1854.929 kb on + strand, within BWI76_RS08795 at 1854.937 kb on - strand, within BWI76_RS08795 at 1854.952 kb on + strand, within BWI76_RS08795 at 1855.344 kb on + strand, within BWI76_RS08795 at 1855.586 kb on - strand at 1855.839 kb on - strand, within BWI76_RS08800 at 1856.083 kb on - strand, within BWI76_RS08800 at 1856.122 kb on + strand, within BWI76_RS08800 at 1856.866 kb on + strand, within BWI76_RS08800 at 1857.043 kb on + strand at 1857.130 kb on - strand at 1857.170 kb on + strand at 1857.267 kb on + strand at 1857.274 kb on - strand at 1857.288 kb on + strand at 1857.296 kb on - strand at 1857.313 kb on - strand at 1857.347 kb on + strand at 1857.491 kb on + strand, within BWI76_RS08805 at 1857.550 kb on - strand, within BWI76_RS08805 at 1857.725 kb on + strand, within BWI76_RS08805 at 1857.978 kb on - strand, within BWI76_RS08805 at 1858.072 kb on + strand, within BWI76_RS08805
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 2.5 mM remove 1,854,619 + BWI76_RS08790 0.80 -0.4 1,854,629 - BWI76_RS08790 0.81 -0.7 1,854,638 + BWI76_RS08790 0.81 +1.4 1,854,821 - -1.3 1,854,851 - +0.5 1,854,893 - -2.7 1,854,929 + BWI76_RS08795 0.12 +0.0 1,854,937 - BWI76_RS08795 0.14 +0.0 1,854,952 + BWI76_RS08795 0.16 -0.3 1,855,344 + BWI76_RS08795 0.74 -0.2 1,855,586 - -0.2 1,855,839 - BWI76_RS08800 0.20 -0.3 1,856,083 - BWI76_RS08800 0.35 -1.2 1,856,122 + BWI76_RS08800 0.37 -0.2 1,856,866 + BWI76_RS08800 0.82 -1.7 1,857,043 + +3.0 1,857,130 - -0.0 1,857,170 + -0.7 1,857,267 + -1.5 1,857,274 - +0.3 1,857,288 + +0.8 1,857,296 - -0.2 1,857,313 - -0.8 1,857,347 + +0.5 1,857,491 + BWI76_RS08805 0.25 -0.8 1,857,550 - BWI76_RS08805 0.31 -0.5 1,857,725 + BWI76_RS08805 0.50 -0.7 1,857,978 - BWI76_RS08805 0.78 -0.2 1,858,072 + BWI76_RS08805 0.89 -0.5
Or see this region's nucleotide sequence