Experiment: Chlorite 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00090 and BWI76_RS00095 overlap by 32 nucleotides BWI76_RS00095 and BWI76_RS00100 are separated by 147 nucleotides BWI76_RS00100 and BWI76_RS00105 are separated by 37 nucleotides
BWI76_RS00090: BWI76_RS00090 - multidrug transporter subunit MdtL, at 17,212 to 18,393
_RS00090
BWI76_RS00095: BWI76_RS00095 - DNA-binding transcriptional regulator, at 18,362 to 19,321
_RS00095
BWI76_RS00100: BWI76_RS00100 - hypothetical protein, at 19,469 to 20,206
_RS00100
BWI76_RS00105: BWI76_RS00105 - NAD(P)H-dependent oxidoreductase, at 20,244 to 20,810
_RS00105
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 17.498 kb on - strand, within BWI76_RS00090 at 17.539 kb on + strand, within BWI76_RS00090 at 17.546 kb on + strand, within BWI76_RS00090 at 17.672 kb on + strand, within BWI76_RS00090 at 17.683 kb on + strand, within BWI76_RS00090 at 17.688 kb on + strand, within BWI76_RS00090 at 17.696 kb on - strand, within BWI76_RS00090 at 17.881 kb on - strand, within BWI76_RS00090 at 17.963 kb on + strand, within BWI76_RS00090 at 18.025 kb on - strand, within BWI76_RS00090 at 18.069 kb on - strand, within BWI76_RS00090 at 18.111 kb on + strand, within BWI76_RS00090 at 18.167 kb on + strand, within BWI76_RS00090 at 18.217 kb on - strand, within BWI76_RS00090 at 18.219 kb on - strand, within BWI76_RS00090 at 18.343 kb on - strand at 18.381 kb on + strand at 18.544 kb on - strand at 18.570 kb on + strand, within BWI76_RS00095 at 18.904 kb on + strand, within BWI76_RS00095 at 19.096 kb on + strand, within BWI76_RS00095 at 19.227 kb on + strand at 19.300 kb on + strand at 19.308 kb on - strand at 19.308 kb on - strand at 19.313 kb on - strand at 19.623 kb on - strand, within BWI76_RS00100 at 19.625 kb on - strand, within BWI76_RS00100 at 19.967 kb on + strand, within BWI76_RS00100 at 20.030 kb on + strand, within BWI76_RS00100 at 20.038 kb on - strand, within BWI76_RS00100 at 20.053 kb on - strand, within BWI76_RS00100 at 20.123 kb on + strand, within BWI76_RS00100 at 20.244 kb on - strand at 20.281 kb on - strand at 20.314 kb on + strand, within BWI76_RS00105
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 2.5 mM remove 17,498 - BWI76_RS00090 0.24 +1.5 17,539 + BWI76_RS00090 0.28 -1.3 17,546 + BWI76_RS00090 0.28 -0.2 17,672 + BWI76_RS00090 0.39 -1.7 17,683 + BWI76_RS00090 0.40 +1.4 17,688 + BWI76_RS00090 0.40 -0.8 17,696 - BWI76_RS00090 0.41 -0.4 17,881 - BWI76_RS00090 0.57 +1.1 17,963 + BWI76_RS00090 0.64 -0.3 18,025 - BWI76_RS00090 0.69 -0.8 18,069 - BWI76_RS00090 0.73 -1.0 18,111 + BWI76_RS00090 0.76 +0.7 18,167 + BWI76_RS00090 0.81 +0.9 18,217 - BWI76_RS00090 0.85 +0.0 18,219 - BWI76_RS00090 0.85 -0.2 18,343 - -0.3 18,381 + -0.4 18,544 - +3.2 18,570 + BWI76_RS00095 0.22 -0.8 18,904 + BWI76_RS00095 0.56 -0.5 19,096 + BWI76_RS00095 0.76 -1.4 19,227 + +0.3 19,300 + -0.3 19,308 - +0.4 19,308 - +0.1 19,313 - +0.1 19,623 - BWI76_RS00100 0.21 -0.2 19,625 - BWI76_RS00100 0.21 -0.6 19,967 + BWI76_RS00100 0.67 +0.4 20,030 + BWI76_RS00100 0.76 -1.0 20,038 - BWI76_RS00100 0.77 -1.8 20,053 - BWI76_RS00100 0.79 -0.9 20,123 + BWI76_RS00100 0.89 +0.0 20,244 - -0.1 20,281 - +0.1 20,314 + BWI76_RS00105 0.12 -1.0
Or see this region's nucleotide sequence