Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4756

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
5,632,151	+		Psyr_4755	0.24	-1.1
5,632,151	+		Psyr_4755	0.24	-0.1
5,632,151	+		Psyr_4755	0.24	-0.1
5,632,151	+		Psyr_4755	0.24	-2.7
5,632,254	-		Psyr_4755	0.34	+0.0
5,632,254	-		Psyr_4755	0.34	+0.5
5,632,254	-		Psyr_4755	0.34	+0.5
5,632,329	-		Psyr_4755	0.41	+0.9
5,632,329	-		Psyr_4755	0.41	+0.5
5,632,370	+		Psyr_4755	0.45	+0.3
5,632,370	+		Psyr_4755	0.45	-0.4
5,632,370	+		Psyr_4755	0.45	+0.3
5,632,371	-		Psyr_4755	0.45	+3.3
5,632,371	-		Psyr_4755	0.45	+0.0
5,632,371	-		Psyr_4755	0.45	+0.5
5,632,371	-		Psyr_4755	0.45	+0.3
5,632,514	+		Psyr_4755	0.59	+2.3
5,632,514	+		Psyr_4755	0.59	+1.4
5,632,514	+		Psyr_4755	0.59	-0.9
5,632,514	+		Psyr_4755	0.59	-3.2
5,632,514	+		Psyr_4755	0.59	-0.4
5,632,514	+		Psyr_4755	0.59	+0.7
5,632,514	+		Psyr_4755	0.59	-2.3
5,632,514	+		Psyr_4755	0.59	-2.5
5,632,514	+		Psyr_4755	0.59	+1.4
5,632,514	+		Psyr_4755	0.59	-0.3
5,632,514	+		Psyr_4755	0.59	-0.7
5,632,514	+		Psyr_4755	0.59	+0.6
5,632,514	+		Psyr_4755	0.59	+0.6
5,632,515	-		Psyr_4755	0.59	-1.0
5,632,515	-		Psyr_4755	0.59	-0.1
5,632,515	-		Psyr_4755	0.59	+1.1
5,632,515	-		Psyr_4755	0.59	-1.7
5,632,515	-		Psyr_4755	0.59	+0.2
5,632,515	-		Psyr_4755	0.59	+0.9
5,632,515	-		Psyr_4755	0.59	+0.6
5,632,515	-		Psyr_4755	0.59	-1.5
5,632,515	-		Psyr_4755	0.59	-0.0
5,632,515	-		Psyr_4755	0.59	-1.4
5,632,515	-		Psyr_4755	0.59	+0.3
5,632,515	-		Psyr_4755	0.59	+0.6
5,632,515	-		Psyr_4755	0.59	+0.6
5,632,515	-		Psyr_4755	0.59	+0.9
5,632,516	+		Psyr_4755	0.59	+0.8
5,632,670	+		Psyr_4755	0.74	-0.1
5,632,674	-		Psyr_4755	0.74	-0.1
5,632,695	-		Psyr_4755	0.76	+0.4
5,632,697	+		Psyr_4755	0.77	-0.7
5,632,698	-		Psyr_4755	0.77	+0.8
5,632,698	-		Psyr_4755	0.77	-1.1
5,632,698	-		Psyr_4755	0.77	-0.4
5,632,698	-		Psyr_4755	0.77	+0.0
5,632,698	-		Psyr_4755	0.77	-0.3
5,632,868	+				-0.7
5,632,869	-				+1.1
5,632,871	+				+0.3
5,632,871	+				+1.4
5,632,872	-				-1.1
5,632,872	-				+0.5
5,632,900	-				+0.6
5,633,008	+				+0.4
5,633,009	-				+0.9
5,633,009	-				+1.1
5,633,009	-				-1.2
5,633,009	-				+3.1
5,633,009	-				-1.1
5,633,083	+		Psyr_4756	0.16	-1.0
5,633,214	-		Psyr_4756	0.31	+1.3
5,633,214	-		Psyr_4756	0.31	+1.3
5,633,241	+		Psyr_4756	0.34	-0.6
5,633,241	+		Psyr_4756	0.34	+0.7
5,633,241	+		Psyr_4756	0.34	+2.3
5,633,242	-		Psyr_4756	0.35	+0.8
5,633,444	-		Psyr_4756	0.58	+0.4
5,633,497	+		Psyr_4756	0.64	+0.9
5,633,497	+		Psyr_4756	0.64	-1.3
5,633,497	+		Psyr_4756	0.64	+0.3
5,633,497	+		Psyr_4756	0.64	+0.3
5,633,497	+		Psyr_4756	0.64	-0.5
5,633,497	+		Psyr_4756	0.64	-0.8
5,633,497	+		Psyr_4756	0.64	-1.1
5,633,497	+		Psyr_4756	0.64	+0.3
5,633,498	-		Psyr_4756	0.64	-0.1
5,633,498	-		Psyr_4756	0.64	-2.3
5,633,518	+		Psyr_4756	0.67	-0.1
5,633,518	+		Psyr_4756	0.67	-0.2
5,633,518	+		Psyr_4756	0.67	+1.9
5,633,519	-		Psyr_4756	0.67	+1.4
5,633,684	-		Psyr_4756	0.86	+0.3
5,633,951	+		Psyr_4757	0.14	+2.3
5,633,951	+		Psyr_4757	0.14	-0.3
5,633,951	+		Psyr_4757	0.14	-1.2
5,633,951	+		Psyr_4757	0.14	-1.3
5,633,951	+		Psyr_4757	0.14	-1.7
5,633,951	+		Psyr_4757	0.14	-0.9
5,633,951	+		Psyr_4757	0.14	-1.3
5,633,951	+		Psyr_4757	0.14	-0.2
5,633,951	+		Psyr_4757	0.14	-0.3
5,633,951	+		Psyr_4757	0.14	+0.3
5,633,951	+		Psyr_4757	0.14	-0.6
5,633,951	+		Psyr_4757	0.14	-1.3
5,633,951	+		Psyr_4757	0.14	-0.5
5,633,952	-		Psyr_4757	0.14	+0.7
5,633,952	-		Psyr_4757	0.14	-2.3
5,633,952	-		Psyr_4757	0.14	-3.1
5,633,952	-		Psyr_4757	0.14	-0.1
5,633,952	-		Psyr_4757	0.14	-1.1
5,633,952	-		Psyr_4757	0.14	+1.0
5,633,952	-		Psyr_4757	0.14	-1.1
5,633,952	-		Psyr_4757	0.14	+0.3
5,633,952	-		Psyr_4757	0.14	-1.5
5,633,952	-		Psyr_4757	0.14	+1.4
5,633,955	+		Psyr_4757	0.15	+0.3
5,633,955	+		Psyr_4757	0.15	+0.6
5,633,955	+		Psyr_4757	0.15	-0.7
5,633,955	+		Psyr_4757	0.15	-0.6
5,633,955	+		Psyr_4757	0.15	-0.7
5,633,955	+		Psyr_4757	0.15	+1.0
5,633,955	+		Psyr_4757	0.15	+0.3
5,633,956	-		Psyr_4757	0.15	+1.6
5,633,956	-		Psyr_4757	0.15	-0.7
5,633,962	+		Psyr_4757	0.16	-1.7
5,633,962	+		Psyr_4757	0.16	-0.7
5,633,962	+		Psyr_4757	0.16	-0.1
5,634,124	+		Psyr_4757	0.40	+1.0
5,634,125	-		Psyr_4757	0.41	+0.0
5,634,265	+		Psyr_4757	0.62	-0.2
5,634,265	+		Psyr_4757	0.62	-0.5
5,634,266	-		Psyr_4757	0.62	-0.7
5,634,385	+		Psyr_4757	0.80	+0.0
5,634,389	-		Psyr_4757	0.80	+3.6
5,634,389	-		Psyr_4757	0.80	-0.1
5,634,389	-		Psyr_4757	0.80	-1.9
5,634,389	-		Psyr_4757	0.80	+1.8
5,634,413	+		Psyr_4757	0.84	-0.7
5,634,443	+		Psyr_4757	0.89	-0.9
5,634,536	+				+0.2
5,634,536	+				+0.5
5,634,536	+				-1.4
5,634,536	+				-2.3
5,634,536	+				+0.9
5,634,536	+				-0.8
5,634,536	+				+0.3
5,634,537	-				-0.1
5,634,537	-				+1.3
5,634,537	-				-2.7
5,634,537	-				-0.0
5,634,537	-				+0.0
5,634,537	-				-2.0
5,634,537	-				-1.2
5,634,537	-				-0.7
5,634,537	-				-0.3
5,634,537	-				+0.2
5,634,537	-				+2.1
5,634,537	-				-0.0
5,634,611	+				+0.9
5,634,611	+				-0.3
5,634,611	+				+0.4
5,634,611	+				+0.1
5,634,611	+				-0.7
5,634,612	-				-0.1
5,634,612	-				+1.1
5,634,612	-				-0.7
5,634,612	-				-1.1
5,634,612	-				+0.5
5,634,612	-				+0.9
5,634,700	-				-1.6
5,634,714	-				+1.9
5,634,714	-				-0.6
5,634,744	+				+0.8
5,634,796	-				-0.7