Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4510

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
5,373,132	+				+0.2
5,373,134	+				-1.0
5,373,134	+				+0.5
5,373,135	-				+1.1
5,373,204	+				-0.2
5,373,230	+				-0.2
5,373,248	+				+2.5
5,373,316	-				+0.3
5,373,327	+				+1.2
5,373,361	+				-0.0
5,373,362	-				-1.2
5,373,368	+				+2.4
5,373,369	-				-0.6
5,373,455	-				+0.2
5,373,455	-				+1.8
5,373,455	-				-0.1
5,373,455	-				+0.2
5,373,455	-				+0.2
5,373,479	+				-1.5
5,373,479	+				+1.1
5,373,479	+				-0.3
5,373,479	+				-0.5
5,373,479	+				+0.8
5,373,479	+				-0.6
5,373,479	+				+0.2
5,373,480	-				-0.7
5,373,480	-				+1.2
5,373,480	-				-0.7
5,373,480	-				+0.6
5,373,480	-				+0.8
5,373,480	-				-0.2
5,373,480	-				-1.4
5,373,480	-				-1.2
5,373,480	-				-0.1
5,373,480	-				+1.2
5,373,480	-				+0.8
5,373,480	-				-2.8
5,373,480	-				-0.8
5,373,480	-				+2.2
5,373,493	+				+1.9
5,373,494	-				+0.2
5,373,494	-				-2.4
5,373,494	-				-1.4
5,373,512	-				+1.4
5,373,549	+		Psyr_4509	0.12	-0.4
5,373,550	-		Psyr_4509	0.12	+0.2
5,373,560	+		Psyr_4509	0.14	-1.4
5,373,560	+		Psyr_4509	0.14	-1.4
5,373,560	+		Psyr_4509	0.14	-1.0
5,373,560	+		Psyr_4509	0.14	-1.2
5,373,560	+		Psyr_4509	0.14	+2.7
5,373,560	+		Psyr_4509	0.14	+0.2
5,373,560	+		Psyr_4509	0.14	+2.8
5,373,560	+		Psyr_4509	0.14	-0.9
5,373,560	+		Psyr_4509	0.14	+1.0
5,373,561	-		Psyr_4509	0.14	-0.1
5,373,561	-		Psyr_4509	0.14	-0.6
5,373,561	-		Psyr_4509	0.14	+0.4
5,373,561	-		Psyr_4509	0.14	-0.5
5,373,608	-		Psyr_4509	0.21	-0.8
5,373,622	-		Psyr_4509	0.23	+0.5
5,373,657	+		Psyr_4509	0.28	-0.0
5,373,657	+		Psyr_4509	0.28	-1.4
5,373,657	+		Psyr_4509	0.28	+0.5
5,373,657	+		Psyr_4509	0.28	+0.0
5,373,657	+		Psyr_4509	0.28	+0.8
5,373,658	-		Psyr_4509	0.29	+0.0
5,373,658	-		Psyr_4509	0.29	+0.2
5,373,680	+		Psyr_4509	0.32	-1.7
5,373,680	+		Psyr_4509	0.32	-0.8
5,373,680	+		Psyr_4509	0.32	+1.2
5,373,681	-		Psyr_4509	0.32	-1.8
5,373,681	-		Psyr_4509	0.32	-0.2
5,373,744	-		Psyr_4509	0.42	-0.5
5,373,744	-		Psyr_4509	0.42	-0.0
5,373,744	-		Psyr_4509	0.42	+0.6
5,373,745	+		Psyr_4509	0.42	-1.5
5,373,745	+		Psyr_4509	0.42	+1.1
5,373,745	+		Psyr_4509	0.42	-0.1
5,373,745	+		Psyr_4509	0.42	+0.8
5,373,746	-		Psyr_4509	0.42	-1.0
5,373,746	-		Psyr_4509	0.42	-1.4
5,373,793	-		Psyr_4509	0.49	+0.7
5,373,797	+		Psyr_4509	0.50	-0.9
5,373,797	+		Psyr_4509	0.50	+1.6
5,373,798	-		Psyr_4509	0.50	+1.8
5,373,839	+		Psyr_4509	0.56	-0.9
5,373,864	-		Psyr_4509	0.60	-1.4
5,373,887	+		Psyr_4509	0.63	-0.3
5,373,888	-		Psyr_4509	0.64	+0.9
5,374,008	-		Psyr_4509	0.82	+1.5
5,374,016	+		Psyr_4509	0.83	+0.2
5,374,017	-		Psyr_4509	0.83	-0.6
5,374,017	-		Psyr_4509	0.83	-3.2
5,374,034	+		Psyr_4509	0.86	-0.6
5,374,089	+				-1.1
5,374,089	+				-0.2
5,374,090	-				-0.6
5,374,161	+				+0.2
5,374,161	+				-0.1
5,374,161	+				-0.0
5,374,162	-				+0.2
5,374,182	-				-0.4
5,374,182	-				-1.8
5,374,182	-				+0.9
5,374,182	-				+0.6
5,374,269	+		Psyr_4510	0.17	+1.7
5,374,270	-		Psyr_4510	0.17	+1.2
5,374,270	-		Psyr_4510	0.17	-1.4
5,374,281	-		Psyr_4510	0.19	-0.2
5,374,281	-		Psyr_4510	0.19	-0.4
5,374,314	-		Psyr_4510	0.22	+0.2
5,374,316	+		Psyr_4510	0.23	-1.2
5,374,496	+		Psyr_4510	0.43	+1.2
5,374,496	+		Psyr_4510	0.43	-0.8
5,374,496	+		Psyr_4510	0.43	+0.1
5,374,525	+		Psyr_4510	0.47	+2.2
5,374,525	+		Psyr_4510	0.47	-0.4
5,374,526	-		Psyr_4510	0.47	-0.1
5,374,527	+		Psyr_4510	0.47	+1.5
5,374,560	-		Psyr_4510	0.51	+1.3
5,374,565	+		Psyr_4510	0.51	+0.6
5,374,566	-		Psyr_4510	0.51	-1.4
5,374,641	+		Psyr_4510	0.60	+0.2
5,374,646	+		Psyr_4510	0.61	-0.7
5,374,683	-		Psyr_4510	0.65	+0.4
5,374,695	+		Psyr_4510	0.66	-0.5
5,374,696	-		Psyr_4510	0.66	+1.3
5,374,759	+		Psyr_4510	0.74	+0.5
5,374,760	-		Psyr_4510	0.74	-2.1
5,374,760	-		Psyr_4510	0.74	+1.8
5,374,760	-		Psyr_4510	0.74	+0.9
5,374,760	-		Psyr_4510	0.74	+1.2
5,374,760	-		Psyr_4510	0.74	-0.2
5,374,785	-		Psyr_4510	0.77	-2.3
5,374,854	+		Psyr_4510	0.84	+0.2
5,374,855	-		Psyr_4510	0.85	+0.2
5,374,855	-		Psyr_4510	0.85	+0.5
5,374,883	+		Psyr_4510	0.88	+2.2
5,374,990	+				-2.2
5,374,991	-				+1.1
5,375,055	+				+0.2
5,375,055	+				+1.2
5,375,056	-				-0.6
5,375,056	-				-0.8
5,375,066	+				-1.2
5,375,077	+		Psyr_4511	0.11	+0.8
5,375,077	+		Psyr_4511	0.11	+1.0
5,375,077	+		Psyr_4511	0.11	+0.2
5,375,077	+		Psyr_4511	0.11	-1.5
5,375,077	+		Psyr_4511	0.11	-0.8
5,375,077	+		Psyr_4511	0.11	+0.5
5,375,077	+		Psyr_4511	0.11	+0.5
5,375,077	+		Psyr_4511	0.11	+0.4
5,375,078	-		Psyr_4511	0.11	+0.5
5,375,078	-		Psyr_4511	0.11	-0.4
5,375,222	+		Psyr_4511	0.24	-0.5
5,375,251	+		Psyr_4511	0.27	-0.5
5,375,254	-		Psyr_4511	0.27	+0.2
5,375,255	+		Psyr_4511	0.27	-0.1
5,375,255	+		Psyr_4511	0.27	+0.2
5,375,256	-		Psyr_4511	0.27	-1.8
5,375,291	+		Psyr_4511	0.30	-1.4
5,375,300	+		Psyr_4511	0.31	+0.6
5,375,363	+		Psyr_4511	0.37	+0.2
5,375,376	-		Psyr_4511	0.38	+0.2
5,375,436	+		Psyr_4511	0.44	+1.2
5,375,437	-		Psyr_4511	0.44	-0.8
5,375,440	-		Psyr_4511	0.44	+1.1
5,375,539	-		Psyr_4511	0.53	-0.1
5,375,588	+		Psyr_4511	0.58	+0.5
5,375,598	+		Psyr_4511	0.59	-2.1
5,375,713	+		Psyr_4511	0.69	+0.3
5,375,724	+		Psyr_4511	0.70	-1.0
5,375,817	+		Psyr_4511	0.79	+1.0
5,375,819	+		Psyr_4511	0.79	+0.7
5,375,861	-		Psyr_4511	0.83	+0.4
5,375,921	-		Psyr_4511	0.88	-0.5
5,375,921	-		Psyr_4511	0.88	-1.4
5,375,932	+		Psyr_4511	0.89	+1.1
5,375,932	+		Psyr_4511	0.89	+0.7
5,375,932	+		Psyr_4511	0.89	+0.6
5,375,932	+		Psyr_4511	0.89	-1.4
5,375,932	+		Psyr_4511	0.89	-0.2
5,375,932	+		Psyr_4511	0.89	+0.2
5,375,951	-				-1.2